RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 GAGE12IP0CL82 117 aa12.15□□□□□ -0.46
HOXC6-201ENST00000243108 CST9LQ9H4G1 147 aa12.15□□□□□ -0.46
HOXC6-201ENST00000243108 C2orf91Q6ZV80 131 aa12.14□□□□□ -0.47
HOXC6-201ENST00000243108 LINC00612Q8N6U2 182 aa12.14□□□□□ -0.47
HOXC6-201ENST00000243108 CHCHD7Q9BUK0 85 aa12.14□□□□□ -0.47
HOXC6-201ENST00000243108 PYGO1Q9Y3Y4 419 aa12.14□□□□□ -0.47
HOXC6-201ENST00000243108 TRBV7-3A0A075B6L6 115 aa12.14□□□□□ -0.47
HOXC6-201ENST00000243108 TRGV2A0A075B6R0 118 aa12.14□□□□□ -0.47
HOXC6-201ENST00000243108 IGKV2D-26A0A0A0MRZ7 120 aa12.14□□□□□ -0.47
HOXC6-201ENST00000243108 FAM222AQ5U5X8 452 aa12.14□□□□□ -0.47
HOXC6-201ENST00000243108 SLC25A29Q8N8R3 303 aa12.14□□□□□ -0.47
HOXC6-201ENST00000243108 IGLV4-69A0A075B6H9 119 aa12.13□□□□□ -0.47
HOXC6-201ENST00000243108 SPART-AS1P0CW21 52 aa12.13□□□□□ -0.47
HOXC6-201ENST00000243108 NMUP48645 174 aa12.13□□□□□ -0.47
HOXC6-201ENST00000243108 COTL1Q14019 142 aa12.13□□□□□ -0.47
HOXC6-201ENST00000243108 HECTD4Q9Y4D8 3996 aa12.12□□□□□ -0.47
HOXC6-201ENST00000243108 NPSP0C0P6 89 aa12.12□□□□□ -0.47
HOXC6-201ENST00000243108 RPL36AP83881 106 aaKnown RBP12.12□□□□□ -0.47
HOXC6-201ENST00000243108 PAPPA-AS1Q5QFB9 102 aa12.12□□□□□ -0.47
HOXC6-201ENST00000243108 PCP2Q8IVA1 136 aa12.12□□□□□ -0.47
HOXC6-201ENST00000243108 ZNRF2Q8NHG8 242 aa12.12□□□□□ -0.47
HOXC6-201ENST00000243108 RPL36ALQ969Q0 106 aaKnown RBP12.12□□□□□ -0.47
HOXC6-201ENST00000243108 IGLV4-3A0A075B6K6 122 aa12.11□□□□□ -0.47
HOXC6-201ENST00000243108 TRBV6-4A0A1B0GX49 114 aa12.11□□□□□ -0.47
HOXC6-201ENST00000243108 FAT2Q9NYQ8 4349 aa12.11□□□□□ -0.47
HOXC6-201ENST00000243108 SIVA1O15304 175 aa12.11□□□□□ -0.47
HOXC6-201ENST00000243108 CRYBA4P53673 196 aa12.11□□□□□ -0.47
HOXC6-201ENST00000243108 UBE2D3P61077 147 aa12.11□□□□□ -0.47
HOXC6-201ENST00000243108 UBE2D2P62837 147 aa12.11□□□□□ -0.47
HOXC6-201ENST00000243108 IGHV3-38A0A0C4DH36 116 aa12.1□□□□□ -0.47
HOXC6-201ENST00000243108 BATFQ16520 125 aa12.1□□□□□ -0.47
HOXC6-201ENST00000243108 FAM104AQ969W3 186 aa12.1□□□□□ -0.47
HOXC6-201ENST00000243108 OPRPNQ99935 248 aaPredicted RBP12.1□□□□□ -0.47
HOXC6-201ENST00000243108 C11orf86A6NJI1 115 aa12.09□□□□□ -0.47
HOXC6-201ENST00000243108 HINT1P49773 126 aaPredicted RBP12.09□□□□□ -0.47
HOXC6-201ENST00000243108 DAZ4Q86SG3 579 aaKnown RBP12.09□□□□□ -0.47
HOXC6-201ENST00000243108 DAZ3Q9NR90 486 aaKnown RBP12.09□□□□□ -0.47
HOXC6-201ENST00000243108 SPANXA1Q9NS26 97 aa12.09□□□□□ -0.47
HOXC6-201ENST00000243108 DNAH17Q9UFH2 4485 aa12.09□□□□□ -0.47
HOXC6-201ENST00000243108 FHL2Q14192 279 aa12.08□□□□□ -0.47
HOXC6-201ENST00000243108 NFE4Q86UQ8 179 aa12.08□□□□□ -0.47
HOXC6-201ENST00000243108 AMELXQ99217 191 aa12.08□□□□□ -0.47
HOXC6-201ENST00000243108 UBE2D4Q9Y2X8 147 aa12.08□□□□□ -0.47
HOXC6-201ENST00000243108 TRGV4A0A0C4DH28 118 aa12.07□□□□□ -0.48
HOXC6-201ENST00000243108 A0A1B0GV90 55 aa12.07□□□□□ -0.48
HOXC6-201ENST00000243108 E9PLD3 99 aa12.07□□□□□ -0.48
HOXC6-201ENST00000243108 MPV17L2Q567V2 206 aa12.07□□□□□ -0.48
HOXC6-201ENST00000243108 COL5A1-AS1Q5SY13 56 aa12.07□□□□□ -0.48
HOXC6-201ENST00000243108 GAGE12JA6NER3 117 aa12.06□□□□□ -0.48
HOXC6-201ENST00000243108 GAGE1Q13065 139 aa12.06□□□□□ -0.48
HOXC6-201ENST00000243108 GAGE4Q13068 117 aa12.06□□□□□ -0.48
HOXC6-201ENST00000243108 GAGE5Q13069 117 aa12.06□□□□□ -0.48
HOXC6-201ENST00000243108 GAGE13Q4V321 117 aa12.06□□□□□ -0.48
HOXC6-201ENST00000243108 TIMM21Q9BVV7 248 aa12.06□□□□□ -0.48
HOXC6-201ENST00000243108 VCX2Q9H322 139 aa12.06□□□□□ -0.48
HOXC6-201ENST00000243108 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.06□□□□□ -0.48
HOXC6-201ENST00000243108 IGKV2-29A2NJV5 120 aaPredicted RBP12.06□□□□□ -0.48
HOXC6-201ENST00000243108 LYRM9A8MSI8 78 aa12.06□□□□□ -0.48
HOXC6-201ENST00000243108 TMEM97Q5BJF2 176 aa12.06□□□□□ -0.48
HOXC6-201ENST00000243108 BVES-AS1Q5T3Y7 98 aa12.06□□□□□ -0.48
HOXC6-201ENST00000243108 TTTY13Q9BZ97 58 aa12.06□□□□□ -0.48
HOXC6-201ENST00000243108 HIGD1BQ9P298 99 aa12.06□□□□□ -0.48
HOXC6-201ENST00000243108 LINC00694P0DN24 101 aa12.05□□□□□ -0.48
HOXC6-201ENST00000243108 HTN3P15516 51 aa12.05□□□□□ -0.48
HOXC6-201ENST00000243108 NTM-AS1Q6ZSK4 140 aa12.05□□□□□ -0.48
HOXC6-201ENST00000243108 TEX48A0A1B0GUV7 120 aa12.04□□□□□ -0.48
HOXC6-201ENST00000243108 DEFB130BP0DP73 79 aa12.04□□□□□ -0.48
HOXC6-201ENST00000243108 DEFB130AP0DP74 79 aa12.04□□□□□ -0.48
HOXC6-201ENST00000243108 MRPS36P82909 103 aaKnown RBP12.04□□□□□ -0.48
HOXC6-201ENST00000243108 GTSF1LQ9H1H1 148 aa12.04□□□□□ -0.48
HOXC6-201ENST00000243108 LOC100131303A0A0U1RQF7 123 aa12.03□□□□□ -0.48
HOXC6-201ENST00000243108 DAD1P61803 113 aa12.03□□□□□ -0.48
HOXC6-201ENST00000243108 MAPKAPK5-AS1Q8N8E1 139 aa12.03□□□□□ -0.48
HOXC6-201ENST00000243108 PRADC1Q9BSG0 188 aa12.03□□□□□ -0.48
HOXC6-201ENST00000243108 TRAV8-6A0A0B4J262 113 aa12.03□□□□□ -0.48
HOXC6-201ENST00000243108 CHAC1Q9BUX1 264 aa12.03□□□□□ -0.48
HOXC6-201ENST00000243108 TRBV25-1A0A075B6N4 114 aa12.02□□□□□ -0.49
HOXC6-201ENST00000243108 HERVK_113P61574 105 aa12.02□□□□□ -0.49
HOXC6-201ENST00000243108 HSD52Q0P140 79 aa12.02□□□□□ -0.49
HOXC6-201ENST00000243108 Q6ZUT4 128 aa12.01□□□□□ -0.49
HOXC6-201ENST00000243108 CSDC2Q9Y534 153 aaKnown RBP12.01□□□□□ -0.49
HOXC6-201ENST00000243108 A0A0J9YXV3 536 aa12□□□□□ -0.49
HOXC6-201ENST00000243108 TMEM170BQ5T4T1 132 aa12□□□□□ -0.49
HOXC6-201ENST00000243108 PKHD1P08F94 4074 aa12□□□□□ -0.49
HOXC6-201ENST00000243108 PKD1P98161 4303 aa12□□□□□ -0.49
HOXC6-201ENST00000243108 ZNF22P17026 224 aaPredicted RBP12□□□□□ -0.49
HOXC6-201ENST00000243108 MYMXA0A1B0GTQ4 84 aa11.99□□□□□ -0.49
HOXC6-201ENST00000243108 TMEM223A0PJW6 202 aa11.98□□□□□ -0.49
HOXC6-201ENST00000243108 SMAGPQ0VAQ4 97 aa11.98□□□□□ -0.49
HOXC6-201ENST00000243108 RNASE13Q5GAN3 156 aaKnown RBP11.98□□□□□ -0.49
HOXC6-201ENST00000243108 TMEM243Q9BU79 118 aa11.98□□□□□ -0.49
HOXC6-201ENST00000243108 H7C423 109 aa11.97□□□□□ -0.49
HOXC6-201ENST00000243108 M0R2N4 97 aa11.97□□□□□ -0.49
HOXC6-201ENST00000243108 PRO0255Q9UI72 69 aa11.97□□□□□ -0.49
HOXC6-201ENST00000243108 TINCRA0A1B0GVN0 87 aa11.97□□□□□ -0.49
HOXC6-201ENST00000243108 SEC11AP67812 179 aa11.97□□□□□ -0.49
HOXC6-201ENST00000243108 DGAT2L7PQ6IED9 249 aa11.97□□□□□ -0.49
HOXC6-201ENST00000243108 UBE2D1P51668 147 aa11.96□□□□□ -0.49
HOXC6-201ENST00000243108 ORAOV1Q8WV07 137 aa11.96□□□□□ -0.49
HOXC6-201ENST00000243108 TRBV6-8A0A0A6YYG3 113 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms