RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 PLA2G2CQ5R387 149 aa8.44□□□□□ -1.06
MSH6-201ENST00000234420 Q6ZVQ6 151 aa8.44□□□□□ -1.06
MSH6-201ENST00000234420 CTSZQ9UBR2 303 aa8.44□□□□□ -1.06
MSH6-201ENST00000234420 C1orf147Q96MC9 270 aaPredicted RBP8.44□□□□□ -1.06
MSH6-201ENST00000234420 CELA1Q9UNI1 258 aa8.44□□□□□ -1.06
MSH6-201ENST00000234420 C19orf84I3L1E1 186 aa8.43□□□□□ -1.06
MSH6-201ENST00000234420 MRPS36P82909 103 aaKnown RBP8.43□□□□□ -1.06
MSH6-201ENST00000234420 SHISA2Q6UWI4 295 aa8.43□□□□□ -1.06
MSH6-201ENST00000234420 C15orf65H3BRN8 121 aa8.43□□□□□ -1.06
MSH6-201ENST00000234420 C5orf56Q8N8D9 126 aa8.43□□□□□ -1.06
MSH6-201ENST00000234420 MAPKAPK5-AS1Q8N8E1 139 aa8.43□□□□□ -1.06
MSH6-201ENST00000234420 FAM208BQ5VWN6 2430 aa8.43□□□□□ -1.06
MSH6-201ENST00000234420 ALPK3Q96L96 1907 aa8.43□□□□□ -1.06
MSH6-201ENST00000234420 MYCNOSP40205 109 aa8.43□□□□□ -1.06
MSH6-201ENST00000234420 Q8N976 141 aa8.43□□□□□ -1.06
MSH6-201ENST00000234420 PTPRBP23467 1997 aa8.43□□□□□ -1.06
MSH6-201ENST00000234420 THSD7BQ9C0I4 1608 aa8.42□□□□□ -1.06
MSH6-201ENST00000234420 BEAN1Q3B7T3 259 aa8.42□□□□□ -1.06
MSH6-201ENST00000234420 PRAC2D3DTV9 90 aa8.42□□□□□ -1.06
MSH6-201ENST00000234420 PIP4P1Q86T03 277 aa8.41□□□□□ -1.06
MSH6-201ENST00000234420 SONP18583 2426 aaKnown RBP8.41□□□□□ -1.06
MSH6-201ENST00000234420 TRBV30A0A0K0K1B3 111 aa8.41□□□□□ -1.06
MSH6-201ENST00000234420 A8MZ25 164 aa8.41□□□□□ -1.06
MSH6-201ENST00000234420 IGFL3Q6UXB1 125 aa8.41□□□□□ -1.06
MSH6-201ENST00000234420 PRORYQ9H606 182 aa8.4□□□□□ -1.06
MSH6-201ENST00000234420 KAAG1Q9UBP8 84 aa8.4□□□□□ -1.06
MSH6-201ENST00000234420 XAGE1AQ9HD64 81 aa8.4□□□□□ -1.06
MSH6-201ENST00000234420 TMEM223A0PJW6 202 aa8.39□□□□□ -1.07
MSH6-201ENST00000234420 CTRLP40313 264 aa8.39□□□□□ -1.07
MSH6-201ENST00000234420 CFAP126Q5VTH2 177 aa8.39□□□□□ -1.07
MSH6-201ENST00000234420 PATE2Q6UY27 113 aa8.39□□□□□ -1.07
MSH6-201ENST00000234420 HIVEP2P31629 2446 aa8.39□□□□□ -1.07
MSH6-201ENST00000234420 LINC00337Q8N6G1 96 aa8.39□□□□□ -1.07
MSH6-201ENST00000234420 MDFICQ9P1T7 246 aa8.39□□□□□ -1.07
MSH6-201ENST00000234420 C20orf203Q8NBC4 194 aa8.39□□□□□ -1.07
MSH6-201ENST00000234420 GOLGB1Q14789 3259 aaKnown RBP8.39□□□□□ -1.07
MSH6-201ENST00000234420 COL4A4P53420 1690 aaPredicted RBP8.38□□□□□ -1.07
MSH6-201ENST00000234420 TP53TG3Q9ULZ0 132 aa8.38□□□□□ -1.07
MSH6-201ENST00000234420 REG3AQ06141 175 aa8.38□□□□□ -1.07
MSH6-201ENST00000234420 PRO0628Q9UI54 55 aa8.38□□□□□ -1.07
MSH6-201ENST00000234420 LINC00308Q8TCZ7 52 aa8.38□□□□□ -1.07
MSH6-201ENST00000234420 TRAV7A0A075B6U4 112 aa8.38□□□□□ -1.07
MSH6-201ENST00000234420 SPINK1P00995 79 aa8.38□□□□□ -1.07
MSH6-201ENST00000234420 FOXL2NBQ6ZUU3 175 aa8.37□□□□□ -1.07
MSH6-201ENST00000234420 LINC00311Q8N616 119 aa8.37□□□□□ -1.07
MSH6-201ENST00000234420 FAM167A-AS1Q96KT0 104 aa8.37□□□□□ -1.07
MSH6-201ENST00000234420 U3KQA8 63 aa8.37□□□□□ -1.07
MSH6-201ENST00000234420 PLAC8L1A1L4L8 177 aa8.37□□□□□ -1.07
MSH6-201ENST00000234420 TRBV10-1A0A0K0K1A3 114 aa8.37□□□□□ -1.07
MSH6-201ENST00000234420 A0A087WVE0 104 aa8.37□□□□□ -1.07
MSH6-201ENST00000234420 TRBV7-6A0A0J9YX20 115 aa8.37□□□□□ -1.07
MSH6-201ENST00000234420 BRI3O95415 125 aa8.36□□□□□ -1.07
MSH6-201ENST00000234420 C6orf99Q4VX62 202 aa8.36□□□□□ -1.07
MSH6-201ENST00000234420 SPRY4Q9C004 299 aa8.36□□□□□ -1.07
MSH6-201ENST00000234420 GDF5OSQ5U4N7 250 aa8.36□□□□□ -1.07
MSH6-201ENST00000234420 IGHV7-81A0A0B4J1V7 117 aa8.36□□□□□ -1.07
MSH6-201ENST00000234420 C18orf65Q6ZTR6 163 aa8.36□□□□□ -1.07
MSH6-201ENST00000234420 LINC00208Q96KT6 92 aa8.36□□□□□ -1.07
MSH6-201ENST00000234420 MAP6D1Q9H9H5 199 aa8.36□□□□□ -1.07
MSH6-201ENST00000234420 H7C423 109 aa8.35□□□□□ -1.07
MSH6-201ENST00000234420 J3QL48 77 aa8.35□□□□□ -1.07
MSH6-201ENST00000234420 CDKN2A-AS1Q9UH64 79 aa8.35□□□□□ -1.07
MSH6-201ENST00000234420 UFSP1Q6NVU6 142 aa8.35□□□□□ -1.07
MSH6-201ENST00000234420 PRO0255Q9UI72 69 aa8.34□□□□□ -1.07
MSH6-201ENST00000234420 TRBV6-5A0A0K0K1A5 114 aa8.34□□□□□ -1.07
MSH6-201ENST00000234420 A6NDX4 124 aa8.34□□□□□ -1.07
MSH6-201ENST00000234420 I3L2K1 104 aa8.34□□□□□ -1.07
MSH6-201ENST00000234420 NEXN-AS1Q8NBZ9 246 aa8.34□□□□□ -1.07
MSH6-201ENST00000234420 COL4A3Q01955 1670 aa8.34□□□□□ -1.07
MSH6-201ENST00000234420 DAZAP2Q15038 168 aaPredicted RBP8.34□□□□□ -1.07
MSH6-201ENST00000234420 Q8TCH9 128 aa8.34□□□□□ -1.07
MSH6-201ENST00000234420 TRAV10A0A0B4J240 114 aa8.34□□□□□ -1.08
MSH6-201ENST00000234420 LY6LH3BQJ8 138 aa8.34□□□□□ -1.08
MSH6-201ENST00000234420 K7EIM0 57 aa8.34□□□□□ -1.08
MSH6-201ENST00000234420 Q6JHZ5 121 aa8.33□□□□□ -1.08
MSH6-201ENST00000234420 UNQ9165/PRO28630Q6UXU0 137 aa8.33□□□□□ -1.08
MSH6-201ENST00000234420 Q6ZTI0 123 aa8.33□□□□□ -1.08
MSH6-201ENST00000234420 CRYGAP11844 174 aa8.33□□□□□ -1.08
MSH6-201ENST00000234420 C2orf91Q6ZV80 131 aa8.33□□□□□ -1.08
MSH6-201ENST00000234420 ZFAND2AQ8N6M9 145 aa8.33□□□□□ -1.08
MSH6-201ENST00000234420 PRM2P04554 102 aa8.33□□□□□ -1.08
MSH6-201ENST00000234420 TRBV6-1A0A0K0K1D8 114 aa8.32□□□□□ -1.08
MSH6-201ENST00000234420 H3BUA1 57 aa8.32□□□□□ -1.08
MSH6-201ENST00000234420 LST1O00453 97 aa8.32□□□□□ -1.08
MSH6-201ENST00000234420 MED14OSP0DP75 135 aa8.32□□□□□ -1.08
MSH6-201ENST00000234420 C4orf26Q17RF5 130 aa8.32□□□□□ -1.08
MSH6-201ENST00000234420 KPRPQ5T749 579 aaPredicted RBP8.32□□□□□ -1.08
MSH6-201ENST00000234420 C19orf71A6NCJ1 209 aa8.32□□□□□ -1.08
MSH6-201ENST00000234420 Q6ZQY7 126 aa8.32□□□□□ -1.08
MSH6-201ENST00000234420 TRBV7-7A0A0K0K1E9 115 aa8.32□□□□□ -1.08
MSH6-201ENST00000234420 A0A1B0GXF2 115 aa8.32□□□□□ -1.08
MSH6-201ENST00000234420 LINC00467Q9BRT7 94 aa8.32□□□□□ -1.08
MSH6-201ENST00000234420 TMEM89A2RUT3 159 aa8.32□□□□□ -1.08
MSH6-201ENST00000234420 ZNF22P17026 224 aaPredicted RBP8.31□□□□□ -1.08
MSH6-201ENST00000234420 C10orf99Q6UWK7 81 aa8.31□□□□□ -1.08
MSH6-201ENST00000234420 LINC00322Q6ZN03 302 aaPredicted RBP8.31□□□□□ -1.08
MSH6-201ENST00000234420 CHCHD10Q8WYQ3 142 aaPredicted RBP8.31□□□□□ -1.08
MSH6-201ENST00000234420 LINC01556Q5JQF7 62 aa8.31□□□□□ -1.08
MSH6-201ENST00000234420 C17orf82Q86X59 251 aaPredicted RBP8.31□□□□□ -1.08
MSH6-201ENST00000234420 U3KQK5 164 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms