RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 NCR3O14931 201 aa12.74□□□□□ -0.37
SLC1A4-201ENST00000234256 MIAQ16674 131 aa12.74□□□□□ -0.37
SLC1A4-201ENST00000234256 TEX49A0A1B0GTD5 131 aa12.73□□□□□ -0.37
SLC1A4-201ENST00000234256 SPAG11BQ08648 103 aa12.73□□□□□ -0.37
SLC1A4-201ENST00000234256 ATRQ13535 2644 aa12.73□□□□□ -0.37
SLC1A4-201ENST00000234256 Q6ZSV7 163 aa12.73□□□□□ -0.37
SLC1A4-201ENST00000234256 IGHV4-28A0A0C4DH34 117 aa12.72□□□□□ -0.37
SLC1A4-201ENST00000234256 hADV29S1A0JD25 119 aa12.72□□□□□ -0.37
SLC1A4-201ENST00000234256 PIK3CD-AS1Q5SR53 167 aa12.72□□□□□ -0.37
SLC1A4-201ENST00000234256 PSMB8P28062 276 aa12.72□□□□□ -0.37
SLC1A4-201ENST00000234256 TET2Q6N021 2002 aaPredicted RBP12.72□□□□□ -0.37
SLC1A4-201ENST00000234256 MRPS12O15235 138 aaKnown RBP12.72□□□□□ -0.37
SLC1A4-201ENST00000234256 TRBV27A0A0K0K1C4 114 aa12.71□□□□□ -0.37
SLC1A4-201ENST00000234256 H3BT86 120 aa12.71□□□□□ -0.37
SLC1A4-201ENST00000234256 WFDC10AQ9H1F0 79 aa12.71□□□□□ -0.37
SLC1A4-201ENST00000234256 CPAMD8Q8IZJ3 1885 aa12.71□□□□□ -0.37
SLC1A4-201ENST00000234256 EXPH5Q8NEV8 1989 aa12.71□□□□□ -0.37
SLC1A4-201ENST00000234256 RPL18AQ02543 176 aaKnown RBP12.71□□□□□ -0.38
SLC1A4-201ENST00000234256 SPANXB1Q9NS25 103 aaPredicted RBP12.71□□□□□ -0.38
SLC1A4-201ENST00000234256 TRACP01848 142 aa12.7□□□□□ -0.38
SLC1A4-201ENST00000234256 MT-ATP8P03928 68 aa12.7□□□□□ -0.38
SLC1A4-201ENST00000234256 RBX1P62877 108 aa12.7□□□□□ -0.38
SLC1A4-201ENST00000234256 ODF3Q96PU9 254 aa12.7□□□□□ -0.38
SLC1A4-201ENST00000234256 COL5A1P20908 1838 aaPredicted RBP12.7□□□□□ -0.38
SLC1A4-201ENST00000234256 CFAP126Q5VTH2 177 aa12.7□□□□□ -0.38
SLC1A4-201ENST00000234256 FAM222AQ5U5X8 452 aa12.69□□□□□ -0.38
SLC1A4-201ENST00000234256 SMIM20Q8N5G0 67 aa12.69□□□□□ -0.38
SLC1A4-201ENST00000234256 CDK2AP2O75956 126 aa12.69□□□□□ -0.38
SLC1A4-201ENST00000234256 TMEM223A0PJW6 202 aa12.69□□□□□ -0.38
SLC1A4-201ENST00000234256 F8W735 103 aaPredicted RBP12.69□□□□□ -0.38
SLC1A4-201ENST00000234256 LINC00269Q8N2A0 174 aa12.69□□□□□ -0.38
SLC1A4-201ENST00000234256 LINC00482Q8N8I6 264 aa12.69□□□□□ -0.38
SLC1A4-201ENST00000234256 ACYP1P07311 99 aa12.69□□□□□ -0.38
SLC1A4-201ENST00000234256 CRYGDP07320 174 aa12.69□□□□□ -0.38
SLC1A4-201ENST00000234256 POLR2KP53803 58 aaKnown RBP12.69□□□□□ -0.38
SLC1A4-201ENST00000234256 UBE2BP63146 152 aa12.68□□□□□ -0.38
SLC1A4-201ENST00000234256 A0A1B0GX51 115 aa12.68□□□□□ -0.38
SLC1A4-201ENST00000234256 C14orf132Q9NPU4 83 aa12.68□□□□□ -0.38
SLC1A4-201ENST00000234256 KLLNB2CW77 178 aa12.67□□□□□ -0.38
SLC1A4-201ENST00000234256 RBMY1FQ15415 496 aaKnown RBP12.67□□□□□ -0.38
SLC1A4-201ENST00000234256 A0A0B4J2C4 111 aa12.67□□□□□ -0.38
SLC1A4-201ENST00000234256 DCANP1Q8TF63 244 aa12.67□□□□□ -0.38
SLC1A4-201ENST00000234256 HECTD1Q9ULT8 2610 aa12.66□□□□□ -0.38
SLC1A4-201ENST00000234256 TRIAP1O43715 76 aa12.66□□□□□ -0.38
SLC1A4-201ENST00000234256 MGAM2Q2M2H8 2515 aa12.66□□□□□ -0.38
SLC1A4-201ENST00000234256 CHD9Q3L8U1 2897 aa12.66□□□□□ -0.38
SLC1A4-201ENST00000234256 ETDCA0A1B0GVM5 59 aa12.65□□□□□ -0.38
SLC1A4-201ENST00000234256 TSHBP01222 138 aa12.65□□□□□ -0.38
SLC1A4-201ENST00000234256 HIGD2BQ4VC39 106 aa12.65□□□□□ -0.38
SLC1A4-201ENST00000234256 CNFNQ9BYD5 112 aa12.65□□□□□ -0.38
SLC1A4-201ENST00000234256 NDUFA1O15239 70 aa12.65□□□□□ -0.38
SLC1A4-201ENST00000234256 INSL3P51460 131 aa12.64□□□□□ -0.39
SLC1A4-201ENST00000234256 MAST4O15021 2626 aa12.64□□□□□ -0.39
SLC1A4-201ENST00000234256 LINC00308Q8TCZ7 52 aa12.64□□□□□ -0.39
SLC1A4-201ENST00000234256 WDFY4Q6ZS81 3184 aa12.64□□□□□ -0.39
SLC1A4-201ENST00000234256 RMI2Q96E14 147 aa12.64□□□□□ -0.39
SLC1A4-201ENST00000234256 ZNF702PQ9H963 129 aa12.64□□□□□ -0.39
SLC1A4-201ENST00000234256 SPANXCQ9NY87 97 aa12.64□□□□□ -0.39
SLC1A4-201ENST00000234256 TRBV6-5A0A0K0K1A5 114 aa12.63□□□□□ -0.39
SLC1A4-201ENST00000234256 SLPIP03973 132 aa12.63□□□□□ -0.39
SLC1A4-201ENST00000234256 IGLV1-40P01703 118 aa12.62□□□□□ -0.39
SLC1A4-201ENST00000234256 A0A096LNJ9 63 aa12.62□□□□□ -0.39
SLC1A4-201ENST00000234256 LOC100131303A0A0U1RQF7 123 aa12.62□□□□□ -0.39
SLC1A4-201ENST00000234256 VCANP13611 3396 aa12.62□□□□□ -0.39
SLC1A4-201ENST00000234256 CCL18P55774 89 aa12.61□□□□□ -0.39
SLC1A4-201ENST00000234256 RNF183Q96D59 192 aa12.61□□□□□ -0.39
SLC1A4-201ENST00000234256 LINC00526Q96FQ7 95 aa12.61□□□□□ -0.39
SLC1A4-201ENST00000234256 ZMAT4Q9H898 229 aa12.61□□□□□ -0.39
SLC1A4-201ENST00000234256 RBM3P98179 157 aaKnown RBP12.61□□□□□ -0.39
SLC1A4-201ENST00000234256 MAP1AP78559 2803 aaPredicted RBP12.6□□□□□ -0.39
SLC1A4-201ENST00000234256 XAGE1AQ9HD64 81 aa12.6□□□□□ -0.39
SLC1A4-201ENST00000234256 PRB2P02812 416 aaPredicted RBP12.6□□□□□ -0.39
SLC1A4-201ENST00000234256 KRTAP10-9P60411 292 aa12.6□□□□□ -0.39
SLC1A4-201ENST00000234256 REG3AQ06141 175 aa12.6□□□□□ -0.39
SLC1A4-201ENST00000234256 PSMG3-AS1Q96PY0 264 aa12.59□□□□□ -0.39
SLC1A4-201ENST00000234256 MRGPRG-AS1Q2M3A8 158 aa12.59□□□□□ -0.39
SLC1A4-201ENST00000234256 INAFM1C9JVW0 142 aa12.59□□□□□ -0.39
SLC1A4-201ENST00000234256 LINC01006Q8NI28 216 aa12.59□□□□□ -0.39
SLC1A4-201ENST00000234256 ADAMTS20P59510 1910 aa12.59□□□□□ -0.39
SLC1A4-201ENST00000234256 RAI1Q7Z5J4 1906 aaPredicted RBP12.59□□□□□ -0.39
SLC1A4-201ENST00000234256 COL4A2P08572 1712 aa12.58□□□□□ -0.39
SLC1A4-201ENST00000234256 NDUFA7O95182 113 aa12.58□□□□□ -0.4
SLC1A4-201ENST00000234256 C9orf85Q96MD7 179 aa12.58□□□□□ -0.4
SLC1A4-201ENST00000234256 TRBV6-8A0A0A6YYG3 113 aa12.58□□□□□ -0.4
SLC1A4-201ENST00000234256 CHCHD10Q8WYQ3 142 aaPredicted RBP12.58□□□□□ -0.4
SLC1A4-201ENST00000234256 IGIPA6NJ69 53 aa12.57□□□□□ -0.4
SLC1A4-201ENST00000234256 FUSP35637 526 aaKnown RBP eCLIP12.57□□□□□ -0.4
SLC1A4-201ENST00000234256 JMJD7-PLA2G4BH0Y9G9 81 aa12.56□□□□□ -0.4
SLC1A4-201ENST00000234256 ZNF843Q8N446 348 aa12.56□□□□□ -0.4
SLC1A4-201ENST00000234256 POM121L12Q8N7R1 296 aa12.56□□□□□ -0.4
SLC1A4-201ENST00000234256 DIRC1Q969H9 104 aa12.56□□□□□ -0.4
SLC1A4-201ENST00000234256 BBC3Q96PG8 261 aaPredicted RBP12.56□□□□□ -0.4
SLC1A4-201ENST00000234256 CXCL5P42830 114 aa12.56□□□□□ -0.4
SLC1A4-201ENST00000234256 FAM110AQ9BQ89 295 aa12.56□□□□□ -0.4
SLC1A4-201ENST00000234256 NREPQ16612 68 aa12.56□□□□□ -0.4
SLC1A4-201ENST00000234256 PYGO1Q9Y3Y4 419 aa12.56□□□□□ -0.4
SLC1A4-201ENST00000234256 ATOX1O00244 68 aa12.54□□□□□ -0.4
SLC1A4-201ENST00000234256 TIRAPP58753 221 aa12.54□□□□□ -0.4
SLC1A4-201ENST00000234256 LINC00643Q86TS7 51 aa12.54□□□□□ -0.4
SLC1A4-201ENST00000234256 SPANXDQ9BXN6 97 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms