RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 K7EQG2 157 aa15.01□□□□□ -0.01
SNX3-201ENST00000230085 Q8N1Y9 231 aa15.01□□□□□ -0.01
SNX3-201ENST00000230085 ANK2Q01484 3957 aa15□□□□□ -0.01
SNX3-201ENST00000230085 TRAV2A0A0B4J234 112 aa15□□□□□ -0.01
SNX3-201ENST00000230085 H3BT86 120 aa15□□□□□ -0.01
SNX3-201ENST00000230085 TIMM17BO60830 172 aa15□□□□□ -0.01
SNX3-201ENST00000230085 KHDC1LQ5JSQ8 128 aa15□□□□□ -0.01
SNX3-201ENST00000230085 IGHV3-30-3P0DP02 117 aa14.99□□□□□ -0.01
SNX3-201ENST00000230085 SNRPD3P62318 126 aaKnown RBP14.99□□□□□ -0.01
SNX3-201ENST00000230085 DEFB121Q5J5C9 76 aa14.99□□□□□ -0.01
SNX3-201ENST00000230085 FAM104AQ969W3 186 aa14.99□□□□□ -0.01
SNX3-201ENST00000230085 ANAPC13Q9BS18 74 aa14.99□□□□□ -0.01
SNX3-201ENST00000230085 A0A0J9YXV3 536 aa14.98□□□□□ -0.01
SNX3-201ENST00000230085 FAM240AA0A1B0GVK7 77 aa14.98□□□□□ -0.01
SNX3-201ENST00000230085 A0A1W2PRX2 142 aa14.98□□□□□ -0.01
SNX3-201ENST00000230085 SHISA2Q6UWI4 295 aa14.98□□□□□ -0.01
SNX3-201ENST00000230085 RAX2Q96IS3 184 aa14.98□□□□□ -0.01
SNX3-201ENST00000230085 IGHV1-58A0A0C4DH39 117 aa14.98□□□□□ -0.01
SNX3-201ENST00000230085 FAM74A4Q5TZK3 123 aa14.98□□□□□ -0.01
SNX3-201ENST00000230085 C18orf65Q6ZTR6 163 aa14.98□□□□□ -0.01
SNX3-201ENST00000230085 A8MTW9 85 aa14.97□□□□□ -0.01
SNX3-201ENST00000230085 GAGE5Q13069 117 aa14.97□□□□□ -0.01
SNX3-201ENST00000230085 GAGE6Q13070 117 aa14.97□□□□□ -0.01
SNX3-201ENST00000230085 SPATA3Q8NHX4 192 aa14.97□□□□□ -0.01
SNX3-201ENST00000230085 OPRPNQ99935 248 aaPredicted RBP14.97□□□□□ -0.01
SNX3-201ENST00000230085 TIMM21Q9BVV7 248 aa14.97□□□□□ -0.01
SNX3-201ENST00000230085 ADARB2-AS1A8MUL3 147 aa14.96□□□□□ -0.01
SNX3-201ENST00000230085 DNHD1Q96M86 4753 aa14.96□□□□□ -0.01
SNX3-201ENST00000230085 TINCRA0A1B0GVN0 87 aa14.96□□□□□ -0.02
SNX3-201ENST00000230085 IFITM1P13164 125 aa14.96□□□□□ -0.02
SNX3-201ENST00000230085 GAGE2BQ13066 116 aa14.96□□□□□ -0.02
SNX3-201ENST00000230085 MIAQ16674 131 aa14.96□□□□□ -0.02
SNX3-201ENST00000230085 GAGE2EQ4V326 116 aa14.96□□□□□ -0.02
SNX3-201ENST00000230085 NTN5Q8WTR8 489 aaPredicted RBP14.96□□□□□ -0.02
SNX3-201ENST00000230085 GAGE2DQ9UEU5 116 aa14.96□□□□□ -0.02
SNX3-201ENST00000230085 TRIAP1O43715 76 aa14.95□□□□□ -0.02
SNX3-201ENST00000230085 SNCGO76070 127 aa14.95□□□□□ -0.02
SNX3-201ENST00000230085 NHLRC4P0CG21 123 aaPredicted RBP14.95□□□□□ -0.02
SNX3-201ENST00000230085 UBE2E2Q96LR5 201 aa14.94□□□□□ -0.02
SNX3-201ENST00000230085 IGKV3-7A0A075B6H7 116 aa14.93□□□□□ -0.02
SNX3-201ENST00000230085 H3BMM0 161 aa14.93□□□□□ -0.02
SNX3-201ENST00000230085 UBE2WQ96B02 151 aa14.93□□□□□ -0.02
SNX3-201ENST00000230085 VSIG2Q96IQ7 327 aa14.93□□□□□ -0.02
SNX3-201ENST00000230085 ICOSQ9Y6W8 199 aa14.93□□□□□ -0.02
SNX3-201ENST00000230085 COX6CP09669 75 aa14.92□□□□□ -0.02
SNX3-201ENST00000230085 NDUFV3P56181 108 aaKnown RBP14.91□□□□□ -0.02
SNX3-201ENST00000230085 TRAV8-4A0A0B4J246 113 aa14.9□□□□□ -0.02
SNX3-201ENST00000230085 Q1RN00 199 aa14.9□□□□□ -0.02
SNX3-201ENST00000230085 DEFB136Q30KP8 78 aa14.9□□□□□ -0.02
SNX3-201ENST00000230085 PPDPFQ9H3Y8 114 aa14.9□□□□□ -0.02
SNX3-201ENST00000230085 WNK1Q9H4A3 2382 aa14.9□□□□□ -0.02
SNX3-201ENST00000230085 IGLV5-45A0A087WSX0 123 aa14.9□□□□□ -0.02
SNX3-201ENST00000230085 LST1O00453 97 aa14.9□□□□□ -0.02
SNX3-201ENST00000230085 TMEM61Q8N0U2 210 aa14.9□□□□□ -0.02
SNX3-201ENST00000230085 C4orf3Q8WVX3 66 aa14.9□□□□□ -0.02
SNX3-201ENST00000230085 DUX3Q96PT4 197 aa14.9□□□□□ -0.02
SNX3-201ENST00000230085 NDUFA12Q9UI09 145 aa14.9□□□□□ -0.02
SNX3-201ENST00000230085 EDN2P20800 178 aa14.89□□□□□ -0.03
SNX3-201ENST00000230085 VWFP04275 2813 aa14.89□□□□□ -0.03
SNX3-201ENST00000230085 H7C423 109 aa14.88□□□□□ -0.03
SNX3-201ENST00000230085 LINC00467Q9BRT7 94 aa14.88□□□□□ -0.03
SNX3-201ENST00000230085 TRAV12-2A0A075B6T6 113 aa14.88□□□□□ -0.03
SNX3-201ENST00000230085 TRAV4A0A0B4J268 109 aa14.88□□□□□ -0.03
SNX3-201ENST00000230085 DNAJC30Q96LL9 226 aa14.88□□□□□ -0.03
SNX3-201ENST00000230085 TIRAPP58753 221 aa14.87□□□□□ -0.03
SNX3-201ENST00000230085 C2orf82Q6UX34 121 aa14.87□□□□□ -0.03
SNX3-201ENST00000230085 SPXQ9BT56 116 aa14.87□□□□□ -0.03
SNX3-201ENST00000230085 TEX49A0A1B0GTD5 131 aa14.86□□□□□ -0.03
SNX3-201ENST00000230085 SPINK13Q1W4C9 94 aa14.86□□□□□ -0.03
SNX3-201ENST00000230085 ADAMTSL4-AS1Q5T5F5 129 aa14.86□□□□□ -0.03
SNX3-201ENST00000230085 DEFB104AQ8WTQ1 72 aa14.86□□□□□ -0.03
SNX3-201ENST00000230085 UBE2D4Q9Y2X8 147 aa14.86□□□□□ -0.03
SNX3-201ENST00000230085 CHCHD7Q9BUK0 85 aa14.85□□□□□ -0.03
SNX3-201ENST00000230085 CCL24O00175 119 aa14.85□□□□□ -0.03
SNX3-201ENST00000230085 NDUFA1O15239 70 aa14.85□□□□□ -0.03
SNX3-201ENST00000230085 IGHV3-64A0A075B6Q5 118 aa14.84□□□□□ -0.03
SNX3-201ENST00000230085 GAGE12JA6NER3 117 aa14.84□□□□□ -0.03
SNX3-201ENST00000230085 H7C2G1 150 aa14.84□□□□□ -0.03
SNX3-201ENST00000230085 GAGE7O76087 117 aa14.84□□□□□ -0.03
SNX3-201ENST00000230085 GAGE12FP0CL80 117 aa14.84□□□□□ -0.03
SNX3-201ENST00000230085 GAGE12GP0CL81 117 aa14.84□□□□□ -0.03
SNX3-201ENST00000230085 GAGE12IP0CL82 117 aa14.84□□□□□ -0.03
SNX3-201ENST00000230085 GAGE4Q13068 117 aa14.84□□□□□ -0.03
SNX3-201ENST00000230085 FAM19A3Q7Z5A8 133 aa14.84□□□□□ -0.03
SNX3-201ENST00000230085 TNFRSF18Q9Y5U5 241 aa14.83□□□□□ -0.03
SNX3-201ENST00000230085 TRBV7-7A0A0K0K1E9 115 aa14.83□□□□□ -0.04
SNX3-201ENST00000230085 TTC32Q5I0X7 151 aa14.83□□□□□ -0.04
SNX3-201ENST00000230085 C15orf53Q8NAA6 179 aa14.83□□□□□ -0.04
SNX3-201ENST00000230085 TRAV8-3A0A0A6YYJ7 113 aa14.82□□□□□ -0.04
SNX3-201ENST00000230085 CMYA5Q8N3K9 4069 aa14.82□□□□□ -0.04
SNX3-201ENST00000230085 NACAE9PAV3 2078 aa14.81□□□□□ -0.04
SNX3-201ENST00000230085 PF4P02776 101 aa14.81□□□□□ -0.04
SNX3-201ENST00000230085 ACYP1P07311 99 aa14.81□□□□□ -0.04
SNX3-201ENST00000230085 COPS9Q8WXC6 57 aa14.8□□□□□ -0.04
SNX3-201ENST00000230085 PKD1L1Q8TDX9 2849 aa14.8□□□□□ -0.04
SNX3-201ENST00000230085 PRSS2P07478 247 aa14.8□□□□□ -0.04
SNX3-201ENST00000230085 RBMY1A1P0DJD3 496 aaKnown RBP14.8□□□□□ -0.04
SNX3-201ENST00000230085 RBMY1CP0DJD4 496 aa14.8□□□□□ -0.04
SNX3-201ENST00000230085 SLURP1P55000 103 aa14.8□□□□□ -0.04
SNX3-201ENST00000230085 RBMY1FQ15415 496 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms