RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 PRR9Q5T870 116 aa10.29□□□□□ -0.76
HCFC2-201ENST00000229330 IGIPA6NJ69 53 aa10.28□□□□□ -0.76
HCFC2-201ENST00000229330 IBA57-AS1B1ANH7 110 aa10.28□□□□□ -0.76
HCFC2-201ENST00000229330 BPY2O14599 106 aa10.28□□□□□ -0.76
HCFC2-201ENST00000229330 TMEM89A2RUT3 159 aa10.28□□□□□ -0.76
HCFC2-201ENST00000229330 SPAG11BQ08648 103 aa10.28□□□□□ -0.76
HCFC2-201ENST00000229330 COX7BP24311 80 aa10.28□□□□□ -0.76
HCFC2-201ENST00000229330 UBE2DNLQ8IWF7 75 aa10.28□□□□□ -0.76
HCFC2-201ENST00000229330 NDUFS5O43920 106 aa10.27□□□□□ -0.77
HCFC2-201ENST00000229330 MRPL55Q7Z7F7 128 aaKnown RBP10.27□□□□□ -0.77
HCFC2-201ENST00000229330 CSPG4Q6UVK1 2322 aa10.27□□□□□ -0.77
HCFC2-201ENST00000229330 PIEZO1Q92508 2521 aa10.27□□□□□ -0.77
HCFC2-201ENST00000229330 IGKV2D-24A0A075B6R9 120 aa10.26□□□□□ -0.77
HCFC2-201ENST00000229330 SCXQ7RTU7 201 aa10.26□□□□□ -0.77
HCFC2-201ENST00000229330 FAM19A5Q7Z5A7 132 aaPredicted RBP10.26□□□□□ -0.77
HCFC2-201ENST00000229330 SNURFQ9Y675 71 aa10.26□□□□□ -0.77
HCFC2-201ENST00000229330 EML5Q05BV3 1969 aa10.26□□□□□ -0.77
HCFC2-201ENST00000229330 PRORYQ9H606 182 aa10.26□□□□□ -0.77
HCFC2-201ENST00000229330 IGLV4-69A0A075B6H9 119 aa10.25□□□□□ -0.77
HCFC2-201ENST00000229330 EBI3Q14213 229 aa10.25□□□□□ -0.77
HCFC2-201ENST00000229330 NCOR2Q9Y618 2525 aa10.25□□□□□ -0.77
HCFC2-201ENST00000229330 K7EQG2 157 aa10.25□□□□□ -0.77
HCFC2-201ENST00000229330 SPTSSBQ8NFR3 76 aa10.24□□□□□ -0.77
HCFC2-201ENST00000229330 A6NDX4 124 aa10.24□□□□□ -0.77
HCFC2-201ENST00000229330 C1orf195Q5TG92 126 aa10.24□□□□□ -0.77
HCFC2-201ENST00000229330 POM121L12Q8N7R1 296 aa10.24□□□□□ -0.77
HCFC2-201ENST00000229330 RMI2Q96E14 147 aa10.24□□□□□ -0.77
HCFC2-201ENST00000229330 PROK1P58294 105 aa10.24□□□□□ -0.77
HCFC2-201ENST00000229330 TSPEAR-AS2P59090 65 aa10.24□□□□□ -0.77
HCFC2-201ENST00000229330 MRPS36P82909 103 aaKnown RBP10.24□□□□□ -0.77
HCFC2-201ENST00000229330 SMIM26A0A096LP01 95 aa10.23□□□□□ -0.77
HCFC2-201ENST00000229330 CSDC2Q9Y534 153 aaKnown RBP10.23□□□□□ -0.77
HCFC2-201ENST00000229330 IGF2RP11717 2491 aa10.23□□□□□ -0.77
HCFC2-201ENST00000229330 MAP6D1Q9H9H5 199 aa10.23□□□□□ -0.77
HCFC2-201ENST00000229330 WDR87Q6ZQQ6 2873 aa10.22□□□□□ -0.77
HCFC2-201ENST00000229330 C19orf84I3L1E1 186 aa10.22□□□□□ -0.77
HCFC2-201ENST00000229330 Q6ZTI0 123 aa10.22□□□□□ -0.77
HCFC2-201ENST00000229330 UBE2D4Q9Y2X8 147 aa10.22□□□□□ -0.77
HCFC2-201ENST00000229330 FSTL3O95633 263 aa10.22□□□□□ -0.77
HCFC2-201ENST00000229330 SHISA2Q6UWI4 295 aa10.22□□□□□ -0.77
HCFC2-201ENST00000229330 SMIM11BQ8TCY0 68 aa10.22□□□□□ -0.77
HCFC2-201ENST00000229330 PSMG3-AS1Q96PY0 264 aa10.22□□□□□ -0.77
HCFC2-201ENST00000229330 PTPN13Q12923 2485 aa10.21□□□□□ -0.77
HCFC2-201ENST00000229330 IGLV2-18A0A075B6J9 118 aa10.21□□□□□ -0.78
HCFC2-201ENST00000229330 CRYGDP07320 174 aa10.21□□□□□ -0.78
HCFC2-201ENST00000229330 COX8CQ7Z4L0 72 aa10.21□□□□□ -0.78
HCFC2-201ENST00000229330 SERP1Q9Y6X1 66 aa10.2□□□□□ -0.78
HCFC2-201ENST00000229330 KLLNB2CW77 178 aa10.2□□□□□ -0.78
HCFC2-201ENST00000229330 NDUFB1O75438 58 aa10.2□□□□□ -0.78
HCFC2-201ENST00000229330 KLK5Q9Y337 293 aaPredicted RBP10.2□□□□□ -0.78
HCFC2-201ENST00000229330 ATRXP46100 2492 aa10.2□□□□□ -0.78
HCFC2-201ENST00000229330 PIEZO2Q9H5I5 2752 aa10.2□□□□□ -0.78
HCFC2-201ENST00000229330 PPDPFQ9H3Y8 114 aa10.2□□□□□ -0.78
HCFC2-201ENST00000229330 LMO4P61968 165 aa10.2□□□□□ -0.78
HCFC2-201ENST00000229330 C6orf99Q4VX62 202 aa10.2□□□□□ -0.78
HCFC2-201ENST00000229330 ESM1Q9NQ30 184 aa10.2□□□□□ -0.78
HCFC2-201ENST00000229330 LOC107984640A0A0U1RRK4 108 aa10.19□□□□□ -0.78
HCFC2-201ENST00000229330 C9orf85Q96MD7 179 aa10.19□□□□□ -0.78
HCFC2-201ENST00000229330 NAV3Q8IVL0 2385 aa10.18□□□□□ -0.78
HCFC2-201ENST00000229330 Q6ZSV7 163 aa10.18□□□□□ -0.78
HCFC2-201ENST00000229330 A0A087WVE0 104 aa10.18□□□□□ -0.78
HCFC2-201ENST00000229330 CHKB-CPT1BH3BT56 60 aa10.17□□□□□ -0.78
HCFC2-201ENST00000229330 KLK12Q9UKR0 248 aa10.17□□□□□ -0.78
HCFC2-201ENST00000229330 CLPSL1A2RUU4 121 aa10.17□□□□□ -0.78
HCFC2-201ENST00000229330 Q8N6K4 173 aa10.17□□□□□ -0.78
HCFC2-201ENST00000229330 C4orf3Q8WVX3 66 aa10.17□□□□□ -0.78
HCFC2-201ENST00000229330 PRO0255Q9UI72 69 aa10.17□□□□□ -0.78
HCFC2-201ENST00000229330 CCKP06307 115 aa10.17□□□□□ -0.78
HCFC2-201ENST00000229330 LRP4O75096 1905 aa10.17□□□□□ -0.78
HCFC2-201ENST00000229330 TRAV7A0A075B6U4 112 aa10.16□□□□□ -0.78
HCFC2-201ENST00000229330 TRBV7-7A0A0K0K1E9 115 aa10.16□□□□□ -0.78
HCFC2-201ENST00000229330 SPART-AS1P0CW21 52 aa10.16□□□□□ -0.78
HCFC2-201ENST00000229330 PRO0461Q9UI25 63 aa10.16□□□□□ -0.78
HCFC2-201ENST00000229330 SMCPP49901 116 aaPredicted RBP10.16□□□□□ -0.78
HCFC2-201ENST00000229330 FAM19A3Q7Z5A8 133 aa10.16□□□□□ -0.78
HCFC2-201ENST00000229330 HIVEP2P31629 2446 aa10.16□□□□□ -0.78
HCFC2-201ENST00000229330 ARHGAP32A7KAX9 2087 aa10.16□□□□□ -0.78
HCFC2-201ENST00000229330 LINC00269Q8N2A0 174 aa10.15□□□□□ -0.78
HCFC2-201ENST00000229330 CPAMD8Q8IZJ3 1885 aa10.15□□□□□ -0.79
HCFC2-201ENST00000229330 ADAMTSL4-AS1Q5T5F5 129 aa10.14□□□□□ -0.79
HCFC2-201ENST00000229330 CHCHD10Q8WYQ3 142 aaPredicted RBP10.14□□□□□ -0.79
HCFC2-201ENST00000229330 REG3AQ06141 175 aa10.14□□□□□ -0.79
HCFC2-201ENST00000229330 MIFP14174 115 aa10.13□□□□□ -0.79
HCFC2-201ENST00000229330 RPL28P46779 137 aaKnown RBP10.13□□□□□ -0.79
HCFC2-201ENST00000229330 CENPFP49454 3210 aa10.12□□□□□ -0.79
HCFC2-201ENST00000229330 TRBV6-8A0A0A6YYG3 113 aa10.12□□□□□ -0.79
HCFC2-201ENST00000229330 Q6ZQY7 126 aa10.12□□□□□ -0.79
HCFC2-201ENST00000229330 TNFRSF13BO14836 293 aaPredicted RBP10.12□□□□□ -0.79
HCFC2-201ENST00000229330 TLN1Q9Y490 2541 aaKnown RBP10.12□□□□□ -0.79
HCFC2-201ENST00000229330 LINC01546A6NGU7 62 aa10.11□□□□□ -0.79
HCFC2-201ENST00000229330 CCL18P55774 89 aa10.11□□□□□ -0.79
HCFC2-201ENST00000229330 DSCAMO60469 2012 aa10.11□□□□□ -0.79
HCFC2-201ENST00000229330 ZNF580Q9UK33 172 aa10.1□□□□□ -0.79
HCFC2-201ENST00000229330 C11orf71Q6IPW1 123 aa10.1□□□□□ -0.79
HCFC2-201ENST00000229330 NAV2Q8IVL1 2488 aa10.1□□□□□ -0.79
HCFC2-201ENST00000229330 TRBV6-4A0A1B0GX49 114 aa10.1□□□□□ -0.79
HCFC2-201ENST00000229330 LINC00242Q5T6M2 205 aa10.1□□□□□ -0.79
HCFC2-201ENST00000229330 C9orf66Q5T8R8 295 aa10.08□□□□□ -0.8
HCFC2-201ENST00000229330 SONP18583 2426 aaKnown RBP10.08□□□□□ -0.8
HCFC2-201ENST00000229330 CCDC168Q8NDH2 2452 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms