RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 IGKV2-29A2NJV5 120 aaPredicted RBP15.15■□□□□ 0.02
CCDC130-201ENST00000221554 ETDBQ3ZM63 59 aa15.15■□□□□ 0.02
CCDC130-201ENST00000221554 MUSTN1Q8IVN3 82 aa15.15■□□□□ 0.02
CCDC130-201ENST00000221554 SPANXDQ9BXN6 97 aa15.15■□□□□ 0.02
CCDC130-201ENST00000221554 SPANXCQ9NY87 97 aa15.15■□□□□ 0.02
CCDC130-201ENST00000221554 CSDC2Q9Y534 153 aaKnown RBP15.15■□□□□ 0.02
CCDC130-201ENST00000221554 NSD1Q96L73 2696 aaPredicted RBP15.14■□□□□ 0.01
CCDC130-201ENST00000221554 YAE1D1Q9NRH1 226 aa15.14■□□□□ 0.01
CCDC130-201ENST00000221554 Q9UF83 564 aa15.14■□□□□ 0.01
CCDC130-201ENST00000221554 IGHV3OR16-12A0A075B7B8 117 aa15.13■□□□□ 0.01
CCDC130-201ENST00000221554 RNF183Q96D59 192 aa15.13■□□□□ 0.01
CCDC130-201ENST00000221554 C1QTNF4Q9BXJ3 329 aa15.13■□□□□ 0.01
CCDC130-201ENST00000221554 NDUFA12Q9UI09 145 aa15.13■□□□□ 0.01
CCDC130-201ENST00000221554 ERG28Q9UKR5 140 aa15.13■□□□□ 0.01
CCDC130-201ENST00000221554 IGLV5-45A0A087WSX0 123 aa15.13■□□□□ 0.01
CCDC130-201ENST00000221554 K7EQD1 137 aa15.13■□□□□ 0.01
CCDC130-201ENST00000221554 TIMM17BO60830 172 aa15.13■□□□□ 0.01
CCDC130-201ENST00000221554 SCGB1C2P0DMR2 95 aa15.13■□□□□ 0.01
CCDC130-201ENST00000221554 C21orf62-AS1Q17RA5 79 aa15.13■□□□□ 0.01
CCDC130-201ENST00000221554 Q6ZUT4 128 aa15.13■□□□□ 0.01
CCDC130-201ENST00000221554 C11orf44Q8N8P7 122 aa15.13■□□□□ 0.01
CCDC130-201ENST00000221554 IGHV3-38A0A0C4DH36 116 aa15.11■□□□□ 0.01
CCDC130-201ENST00000221554 IGHV3-33P01772 117 aa15.11■□□□□ 0.01
CCDC130-201ENST00000221554 HERVK_113P63121 156 aa15.11■□□□□ 0.01
CCDC130-201ENST00000221554 ZFAND6Q6FIF0 208 aa15.11■□□□□ 0.01
CCDC130-201ENST00000221554 FAM19A3Q7Z5A8 133 aa15.11■□□□□ 0.01
CCDC130-201ENST00000221554 ZNF418Q8TF45 676 aaPredicted RBP15.11■□□□□ 0.01
CCDC130-201ENST00000221554 C16orf74Q96GX8 76 aa15.11■□□□□ 0.01
CCDC130-201ENST00000221554 KRTAP1-1Q07627 177 aa15.11■□□□□ 0.01
CCDC130-201ENST00000221554 SH2D6Q7Z4S9 175 aa15.11■□□□□ 0.01
CCDC130-201ENST00000221554 IGLV1-51P01701 117 aa15.1■□□□□ 0.01
CCDC130-201ENST00000221554 TRAV8-3A0A0A6YYJ7 113 aa15.09■□□□□ 0.01
CCDC130-201ENST00000221554 IFITM1P13164 125 aa15.09■□□□□ 0.01
CCDC130-201ENST00000221554 RNASE13Q5GAN3 156 aaKnown RBP15.09■□□□□ 0.01
CCDC130-201ENST00000221554 LITAFQ99732 161 aa15.09■□□□□ 0.01
CCDC130-201ENST00000221554 NIPBLQ6KC79 2804 aaeCLIP15.09■□□□□ 0.01
CCDC130-201ENST00000221554 NDUFA7O95182 113 aa15.08■□□□□ 0.01
CCDC130-201ENST00000221554 SBSPONQ8IVN8 264 aa15.08■□□□□ 0.01
CCDC130-201ENST00000221554 ANK3Q12955 4377 aaKnown RBP15.08■□□□□ 0
CCDC130-201ENST00000221554 M0QXV9 152 aa15.08■□□□□ 0
CCDC130-201ENST00000221554 TCL1BO95988 128 aa15.08■□□□□ 0
CCDC130-201ENST00000221554 HIST2H2BDQ6DRA6 164 aa15.08■□□□□ 0
CCDC130-201ENST00000221554 GTSF1LQ9H1H1 148 aa15.08■□□□□ 0
CCDC130-201ENST00000221554 MIAQ16674 131 aa15.07■□□□□ 0
CCDC130-201ENST00000221554 SMR3AQ99954 134 aa15.07■□□□□ 0
CCDC130-201ENST00000221554 HIVEP2P31629 2446 aa15.07■□□□□ 0
CCDC130-201ENST00000221554 SPINK8P0C7L1 97 aa15.06■□□□□ 0
CCDC130-201ENST00000221554 Q6ZTI0 123 aa15.06■□□□□ 0
CCDC130-201ENST00000221554 H7C423 109 aa15.06■□□□□ 0
CCDC130-201ENST00000221554 NDUFA1O15239 70 aa15.06■□□□□ 0
CCDC130-201ENST00000221554 CIRBPQ14011 172 aaKnown RBP15.06■□□□□ 0
CCDC130-201ENST00000221554 GAGE12HA6NDE8 117 aa15.05■□□□□ -0
CCDC130-201ENST00000221554 PRSS2P07478 247 aa15.05■□□□□ -0
CCDC130-201ENST00000221554 SMCPP49901 116 aaPredicted RBP15.05■□□□□ -0
CCDC130-201ENST00000221554 HILS1P60008 231 aa15.05■□□□□ -0
CCDC130-201ENST00000221554 FOXI1Q12951 378 aa15.05■□□□□ -0
CCDC130-201ENST00000221554 COPS9Q8WXC6 57 aa15.05■□□□□ -0
CCDC130-201ENST00000221554 SIGMAR1Q99720 223 aa15.05■□□□□ -0
CCDC130-201ENST00000221554 SPATA25Q9BR10 227 aa15.05■□□□□ -0
CCDC130-201ENST00000221554 OVOL2Q9BRP0 275 aa15.05■□□□□ -0
CCDC130-201ENST00000221554 CDKN2A-AS1Q9UH64 79 aa15.05■□□□□ -0
CCDC130-201ENST00000221554 TRBV30A0A0K0K1B3 111 aa15.04■□□□□ -0
CCDC130-201ENST00000221554 SFTA2Q6UW10 78 aa15.04■□□□□ -0
CCDC130-201ENST00000221554 NOP10Q9NPE3 64 aaKnown RBP15.04■□□□□ -0
CCDC130-201ENST00000221554 MTURNQ8N3F0 131 aa15.03■□□□□ -0
CCDC130-201ENST00000221554 TRBV6-4A0A1B0GX49 114 aa15.03■□□□□ -0
CCDC130-201ENST00000221554 GIG44P09565 113 aaPredicted RBP15.03■□□□□ -0
CCDC130-201ENST00000221554 SCGB1A1P11684 91 aa15.03■□□□□ -0
CCDC130-201ENST00000221554 TEN1Q86WV5 123 aa15.03■□□□□ -0
CCDC130-201ENST00000221554 TMEM101Q96IK0 257 aa15.03■□□□□ -0
CCDC130-201ENST00000221554 FN1P02751 2386 aaKnown RBP15.02■□□□□ -0
CCDC130-201ENST00000221554 SETD2Q9BYW2 2564 aaPredicted RBP15.02■□□□□ -0
CCDC130-201ENST00000221554 IGLV5-39A0A0G2JS06 123 aa15.02□□□□□ -0.01
CCDC130-201ENST00000221554 ADARB2-AS1A8MUL3 147 aa15.02□□□□□ -0.01
CCDC130-201ENST00000221554 Q1RN00 199 aa15.02□□□□□ -0.01
CCDC130-201ENST00000221554 PPDPFLQ8WWR9 84 aa15.02□□□□□ -0.01
CCDC130-201ENST00000221554 C19orf73Q9NVV2 129 aa15.02□□□□□ -0.01
CCDC130-201ENST00000221554 ATXN8Q156A1 80 aa15.01□□□□□ -0.01
CCDC130-201ENST00000221554 LINC00242Q5T6M2 205 aa15.01□□□□□ -0.01
CCDC130-201ENST00000221554 EIF4EBP3O60516 100 aaPredicted RBP15.01□□□□□ -0.01
CCDC130-201ENST00000221554 TRGV2A0A075B6R0 118 aa15□□□□□ -0.01
CCDC130-201ENST00000221554 UBE2L6O14933 153 aa15□□□□□ -0.01
CCDC130-201ENST00000221554 ADAMTSL4-AS1Q5T5F5 129 aa15□□□□□ -0.01
CCDC130-201ENST00000221554 NTM-AS1Q6ZSK4 140 aa15□□□□□ -0.01
CCDC130-201ENST00000221554 TMEM243Q9BU79 118 aa15□□□□□ -0.01
CCDC130-201ENST00000221554 CDC42SE2Q9NRR3 84 aa15□□□□□ -0.01
CCDC130-201ENST00000221554 GAGE12JA6NER3 117 aa14.99□□□□□ -0.01
CCDC130-201ENST00000221554 COX6CP09669 75 aa14.99□□□□□ -0.01
CCDC130-201ENST00000221554 GAGE4Q13068 117 aa14.99□□□□□ -0.01
CCDC130-201ENST00000221554 GAGE5Q13069 117 aa14.99□□□□□ -0.01
CCDC130-201ENST00000221554 CSNK1G2-AS1Q8NCQ2 148 aa14.99□□□□□ -0.01
CCDC130-201ENST00000221554 PLAC8L1A1L4L8 177 aa14.98□□□□□ -0.01
CCDC130-201ENST00000221554 LINC01600Q96MT4 127 aa14.98□□□□□ -0.01
CCDC130-201ENST00000221554 LY6G6DO95868 133 aa14.97□□□□□ -0.01
CCDC130-201ENST00000221554 LINC00694P0DN24 101 aa14.97□□□□□ -0.01
CCDC130-201ENST00000221554 RPL35AP18077 110 aaKnown RBP14.97□□□□□ -0.01
CCDC130-201ENST00000221554 HERV-K104P63124 156 aa14.96□□□□□ -0.01
CCDC130-201ENST00000221554 COX6A2Q02221 97 aa14.96□□□□□ -0.01
CCDC130-201ENST00000221554 NF1P21359 2839 aa14.96□□□□□ -0.01
CCDC130-201ENST00000221554 CUBNO60494 3623 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms