RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 RBMY1FQ15415 496 aaKnown RBP10.83□□□□□ -0.68
PTPRA-201ENST00000216877 IGHV7-81A0A0B4J1V7 117 aa10.83□□□□□ -0.68
PTPRA-201ENST00000216877 IGHV1-69P01742 117 aa10.83□□□□□ -0.68
PTPRA-201ENST00000216877 MALP21145 153 aa10.83□□□□□ -0.68
PTPRA-201ENST00000216877 GNLYP22749 145 aa10.83□□□□□ -0.68
PTPRA-201ENST00000216877 Q5XG85 94 aa10.83□□□□□ -0.68
PTPRA-201ENST00000216877 TRBV27A0A0K0K1C4 114 aa10.83□□□□□ -0.68
PTPRA-201ENST00000216877 FAM236DA0A1B0GTK5 79 aa10.83□□□□□ -0.68
PTPRA-201ENST00000216877 PRB1P04280 392 aa10.83□□□□□ -0.68
PTPRA-201ENST00000216877 FAM236CP0DP71 79 aa10.83□□□□□ -0.68
PTPRA-201ENST00000216877 FAM223BA6NKX1 122 aa10.82□□□□□ -0.68
PTPRA-201ENST00000216877 MTORP42345 2549 aa10.82□□□□□ -0.68
PTPRA-201ENST00000216877 VSIG2Q96IQ7 327 aa10.82□□□□□ -0.68
PTPRA-201ENST00000216877 IGHV4OR15-8A0A075B7B6 117 aa10.82□□□□□ -0.68
PTPRA-201ENST00000216877 A0A087WW49 117 aa10.82□□□□□ -0.68
PTPRA-201ENST00000216877 FHL2Q14192 279 aa10.82□□□□□ -0.68
PTPRA-201ENST00000216877 LINC00846Q9NV44 126 aa10.82□□□□□ -0.68
PTPRA-201ENST00000216877 PIK3CD-AS1Q5SR53 167 aa10.82□□□□□ -0.68
PTPRA-201ENST00000216877 CDKN2A-AS1Q9UH64 79 aa10.82□□□□□ -0.68
PTPRA-201ENST00000216877 LINC00315P59091 139 aa10.81□□□□□ -0.68
PTPRA-201ENST00000216877 LINC00308Q8TCZ7 52 aa10.81□□□□□ -0.68
PTPRA-201ENST00000216877 NCR3O14931 201 aa10.81□□□□□ -0.68
PTPRA-201ENST00000216877 EDN2P20800 178 aa10.81□□□□□ -0.68
PTPRA-201ENST00000216877 CCDC140Q96MF4 163 aa10.81□□□□□ -0.68
PTPRA-201ENST00000216877 FAM218AQ96MZ4 157 aa10.81□□□□□ -0.68
PTPRA-201ENST00000216877 SLPIP03973 132 aa10.81□□□□□ -0.68
PTPRA-201ENST00000216877 KHDC1LQ5JSQ8 128 aa10.8□□□□□ -0.68
PTPRA-201ENST00000216877 TOMM7Q9P0U1 55 aa10.8□□□□□ -0.68
PTPRA-201ENST00000216877 KAAG1Q9UBP8 84 aa10.8□□□□□ -0.68
PTPRA-201ENST00000216877 A0A0J9YX75 114 aa10.8□□□□□ -0.68
PTPRA-201ENST00000216877 UNQ9165/PRO28630Q6UXU0 137 aa10.8□□□□□ -0.68
PTPRA-201ENST00000216877 PRO0628Q9UI54 55 aa10.8□□□□□ -0.68
PTPRA-201ENST00000216877 IGKV3OR2-268A0A0C4DH90 116 aa10.8□□□□□ -0.68
PTPRA-201ENST00000216877 PROK1P58294 105 aa10.79□□□□□ -0.68
PTPRA-201ENST00000216877 M0QY20 66 aa10.79□□□□□ -0.68
PTPRA-201ENST00000216877 NPBQ8NG41 125 aa10.79□□□□□ -0.68
PTPRA-201ENST00000216877 RBM3P98179 157 aaKnown RBP10.79□□□□□ -0.68
PTPRA-201ENST00000216877 KIF25-AS1Q9Y6Z4 181 aa10.79□□□□□ -0.68
PTPRA-201ENST00000216877 E7EQL1 145 aa10.78□□□□□ -0.68
PTPRA-201ENST00000216877 CRPP02741 224 aa10.78□□□□□ -0.68
PTPRA-201ENST00000216877 MRPL53Q96EL3 112 aaKnown RBP10.78□□□□□ -0.68
PTPRA-201ENST00000216877 SOCS3O14543 225 aa10.78□□□□□ -0.68
PTPRA-201ENST00000216877 LENEPQ9Y5L5 61 aa10.78□□□□□ -0.68
PTPRA-201ENST00000216877 LY6LH3BQJ8 138 aa10.77□□□□□ -0.69
PTPRA-201ENST00000216877 TRBV12-3P01733 135 aa10.77□□□□□ -0.69
PTPRA-201ENST00000216877 IGFL3Q6UXB1 125 aa10.77□□□□□ -0.69
PTPRA-201ENST00000216877 SNURFQ9Y675 71 aa10.77□□□□□ -0.69
PTPRA-201ENST00000216877 SPINK13Q1W4C9 94 aa10.76□□□□□ -0.69
PTPRA-201ENST00000216877 DCHS2Q6V1P9 2916 aa10.76□□□□□ -0.69
PTPRA-201ENST00000216877 LINC01561Q8N1V8 128 aa10.76□□□□□ -0.69
PTPRA-201ENST00000216877 C9orf129Q5T035 196 aaKnown RBP10.76□□□□□ -0.69
PTPRA-201ENST00000216877 ENHOQ6UWT2 76 aa10.76□□□□□ -0.69
PTPRA-201ENST00000216877 ACANP16112 2415 aa10.75□□□□□ -0.69
PTPRA-201ENST00000216877 LECT2O14960 151 aa10.75□□□□□ -0.69
PTPRA-201ENST00000216877 FAM110DQ8TAY7 271 aaPredicted RBP10.75□□□□□ -0.69
PTPRA-201ENST00000216877 LINC01600Q96MT4 127 aa10.75□□□□□ -0.69
PTPRA-201ENST00000216877 IGHV3-16A0A0C4DH30 117 aa10.75□□□□□ -0.69
PTPRA-201ENST00000216877 HIVEP2P31629 2446 aa10.75□□□□□ -0.69
PTPRA-201ENST00000216877 IGHG2P01859 326 aa10.75□□□□□ -0.69
PTPRA-201ENST00000216877 LY6EQ16553 131 aa10.75□□□□□ -0.69
PTPRA-201ENST00000216877 FAM19A1Q7Z5A9 133 aa10.75□□□□□ -0.69
PTPRA-201ENST00000216877 V9GYY9 64 aa10.75□□□□□ -0.69
PTPRA-201ENST00000216877 FLNBO75369 2602 aaKnown RBP10.75□□□□□ -0.69
PTPRA-201ENST00000216877 SEC61GP60059 68 aa10.74□□□□□ -0.69
PTPRA-201ENST00000216877 IGFL2Q6UWQ7 119 aa10.74□□□□□ -0.69
PTPRA-201ENST00000216877 RHPN1-AS1Q9BWJ2 59 aa10.74□□□□□ -0.69
PTPRA-201ENST00000216877 PRORYQ9H606 182 aa10.74□□□□□ -0.69
PTPRA-201ENST00000216877 Q8NA96 180 aa10.74□□□□□ -0.69
PTPRA-201ENST00000216877 MPLKIPQ8TAP9 179 aa10.74□□□□□ -0.69
PTPRA-201ENST00000216877 COL12A1Q99715 3063 aa10.74□□□□□ -0.69
PTPRA-201ENST00000216877 MAPK1IP1LQ8NDC0 245 aa10.73□□□□□ -0.69
PTPRA-201ENST00000216877 MRPS36P82909 103 aaKnown RBP10.73□□□□□ -0.69
PTPRA-201ENST00000216877 Q8N9W7 124 aa10.73□□□□□ -0.69
PTPRA-201ENST00000216877 RPL36AP83881 106 aaKnown RBP10.73□□□□□ -0.69
PTPRA-201ENST00000216877 S100A7L2Q5SY68 101 aa10.73□□□□□ -0.69
PTPRA-201ENST00000216877 RPL36ALQ969Q0 106 aaKnown RBP10.73□□□□□ -0.69
PTPRA-201ENST00000216877 ITLN2Q8WWU7 325 aaPredicted RBP10.72□□□□□ -0.69
PTPRA-201ENST00000216877 Q9UF83 564 aa10.72□□□□□ -0.69
PTPRA-201ENST00000216877 PRM2P04554 102 aa10.72□□□□□ -0.69
PTPRA-201ENST00000216877 LINC00158P58513 81 aa10.72□□□□□ -0.69
PTPRA-201ENST00000216877 SVEP1Q4LDE5 3571 aa10.72□□□□□ -0.69
PTPRA-201ENST00000216877 LRBAP50851 2863 aa10.72□□□□□ -0.69
PTPRA-201ENST00000216877 MED14OSP0DP75 135 aa10.71□□□□□ -0.69
PTPRA-201ENST00000216877 SOSTDC1Q6X4U4 206 aa10.71□□□□□ -0.69
PTPRA-201ENST00000216877 A0A087WYN8 130 aa10.71□□□□□ -0.69
PTPRA-201ENST00000216877 C1orf195Q5TG92 126 aa10.71□□□□□ -0.69
PTPRA-201ENST00000216877 Q6JHZ5 121 aa10.71□□□□□ -0.7
PTPRA-201ENST00000216877 TRBV6-5A0A0K0K1A5 114 aa10.7□□□□□ -0.7
PTPRA-201ENST00000216877 COPS9Q8WXC6 57 aa10.7□□□□□ -0.7
PTPRA-201ENST00000216877 UPK3BQ9BT76 320 aa10.7□□□□□ -0.7
PTPRA-201ENST00000216877 RPL28P46779 137 aaKnown RBP10.7□□□□□ -0.7
PTPRA-201ENST00000216877 XCL1P47992 114 aa10.7□□□□□ -0.7
PTPRA-201ENST00000216877 HIST2H2BCQ6DN03 193 aa10.7□□□□□ -0.7
PTPRA-201ENST00000216877 HIST2H2BDQ6DRA6 164 aa10.7□□□□□ -0.7
PTPRA-201ENST00000216877 XCL2Q9UBD3 114 aa10.7□□□□□ -0.7
PTPRA-201ENST00000216877 ASH1LQ9NR48 2969 aaKnown RBP10.69□□□□□ -0.7
PTPRA-201ENST00000216877 PAX4O43316 350 aa10.69□□□□□ -0.7
PTPRA-201ENST00000216877 NDUFC2O95298 119 aa10.69□□□□□ -0.7
PTPRA-201ENST00000216877 HAMPP81172 84 aa10.69□□□□□ -0.7
PTPRA-201ENST00000216877 MINOS1Q5TGZ0 78 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms