RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 ODF3BA8MYP8 253 aa7.77□□□□□ -1.17
VCL-201ENST00000211998 CCDC140Q96MF4 163 aa7.77□□□□□ -1.17
VCL-201ENST00000211998 PRO0255Q9UI72 69 aa7.77□□□□□ -1.17
VCL-201ENST00000211998 PYGO1Q9Y3Y4 419 aa7.77□□□□□ -1.17
VCL-201ENST00000211998 FREM1Q5H8C1 2179 aa7.77□□□□□ -1.17
VCL-201ENST00000211998 FSTL3O95633 263 aa7.77□□□□□ -1.17
VCL-201ENST00000211998 PCDH15Q96QU1 1955 aa7.77□□□□□ -1.17
VCL-201ENST00000211998 DNAJC9-AS1A6NH13 148 aa7.77□□□□□ -1.17
VCL-201ENST00000211998 POM121L12Q8N7R1 296 aa7.77□□□□□ -1.17
VCL-201ENST00000211998 ODF3Q96PU9 254 aa7.77□□□□□ -1.17
VCL-201ENST00000211998 FAM30AQ9NZY2 134 aa7.77□□□□□ -1.17
VCL-201ENST00000211998 PCNX1Q96RV3 2341 aa7.77□□□□□ -1.17
VCL-201ENST00000211998 PRORYQ9H606 182 aa7.76□□□□□ -1.17
VCL-201ENST00000211998 C4orf26Q17RF5 130 aa7.76□□□□□ -1.17
VCL-201ENST00000211998 TSHBP01222 138 aa7.76□□□□□ -1.17
VCL-201ENST00000211998 Q6ZSV7 163 aa7.76□□□□□ -1.17
VCL-201ENST00000211998 A0A0J9YWU9 116 aa7.75□□□□□ -1.17
VCL-201ENST00000211998 PSPHP1O15172 72 aa7.75□□□□□ -1.17
VCL-201ENST00000211998 MSMPQ1L6U9 139 aa7.75□□□□□ -1.17
VCL-201ENST00000211998 MAP6D1Q9H9H5 199 aa7.75□□□□□ -1.17
VCL-201ENST00000211998 KLK12Q9UKR0 248 aa7.75□□□□□ -1.17
VCL-201ENST00000211998 C1orf158Q8N1D5 194 aa7.75□□□□□ -1.17
VCL-201ENST00000211998 PRR15LQ9BU68 103 aa7.75□□□□□ -1.17
VCL-201ENST00000211998 C11orf21Q9P2W6 132 aa7.75□□□□□ -1.17
VCL-201ENST00000211998 LMO4P61968 165 aa7.75□□□□□ -1.17
VCL-201ENST00000211998 Q6ZQY7 126 aa7.75□□□□□ -1.17
VCL-201ENST00000211998 MED12LQ86YW9 2145 aa7.75□□□□□ -1.17
VCL-201ENST00000211998 KIF26AQ9ULI4 1882 aaPredicted RBP7.74□□□□□ -1.17
VCL-201ENST00000211998 TRBV7-7A0A0K0K1E9 115 aa7.74□□□□□ -1.17
VCL-201ENST00000211998 LINC00269Q8N2A0 174 aa7.74□□□□□ -1.17
VCL-201ENST00000211998 DCANP1Q8TF63 244 aa7.74□□□□□ -1.17
VCL-201ENST00000211998 SRCAPQ6ZRS2 3230 aa7.74□□□□□ -1.17
VCL-201ENST00000211998 C14orf177Q52M58 125 aa7.74□□□□□ -1.17
VCL-201ENST00000211998 A0A096LNJ9 63 aa7.74□□□□□ -1.17
VCL-201ENST00000211998 PROK1P58294 105 aa7.74□□□□□ -1.17
VCL-201ENST00000211998 POLR2KP53803 58 aaKnown RBP7.73□□□□□ -1.17
VCL-201ENST00000211998 PLXNB1O43157 2135 aa7.73□□□□□ -1.17
VCL-201ENST00000211998 MED13LQ71F56 2210 aa7.73□□□□□ -1.17
VCL-201ENST00000211998 TSPEAR-AS2P59090 65 aa7.73□□□□□ -1.17
VCL-201ENST00000211998 NANOS2P60321 138 aaKnown RBP7.73□□□□□ -1.17
VCL-201ENST00000211998 NCOA6Q14686 2063 aaPredicted RBP7.73□□□□□ -1.17
VCL-201ENST00000211998 TRBV7-6A0A0J9YX20 115 aa7.73□□□□□ -1.17
VCL-201ENST00000211998 IGIPA6NJ69 53 aa7.73□□□□□ -1.17
VCL-201ENST00000211998 PRYO14603 147 aa7.73□□□□□ -1.17
VCL-201ENST00000211998 WFDC13Q8IUB5 93 aa7.73□□□□□ -1.17
VCL-201ENST00000211998 Q6YL49 198 aa7.72□□□□□ -1.17
VCL-201ENST00000211998 CELA1Q9UNI1 258 aa7.72□□□□□ -1.17
VCL-201ENST00000211998 Q6ZTI0 123 aa7.72□□□□□ -1.17
VCL-201ENST00000211998 IGLV4-69A0A075B6H9 119 aa7.72□□□□□ -1.17
VCL-201ENST00000211998 RNASE3P12724 160 aaKnown RBP7.72□□□□□ -1.17
VCL-201ENST00000211998 C4orf48Q5BLP8 95 aa7.72□□□□□ -1.17
VCL-201ENST00000211998 CNFNQ9BYD5 112 aa7.72□□□□□ -1.17
VCL-201ENST00000211998 TANC2Q9HCD6 1990 aa7.71□□□□□ -1.18
VCL-201ENST00000211998 IGHV4-31P0DP07 118 aa7.71□□□□□ -1.18
VCL-201ENST00000211998 RPS28P62857 69 aaKnown RBP7.71□□□□□ -1.18
VCL-201ENST00000211998 LTBP2Q14767 1821 aa7.71□□□□□ -1.18
VCL-201ENST00000211998 DEFB4AO15263 64 aa7.7□□□□□ -1.18
VCL-201ENST00000211998 CHCHD10Q8WYQ3 142 aaPredicted RBP7.7□□□□□ -1.18
VCL-201ENST00000211998 C9orf85Q96MD7 179 aa7.7□□□□□ -1.18
VCL-201ENST00000211998 UBE2D4Q9Y2X8 147 aa7.7□□□□□ -1.18
VCL-201ENST00000211998 PRR9Q5T870 116 aa7.7□□□□□ -1.18
VCL-201ENST00000211998 NTM-AS1Q6ZSK4 140 aa7.7□□□□□ -1.18
VCL-201ENST00000211998 LINC01548A6NM66 108 aa7.7□□□□□ -1.18
VCL-201ENST00000211998 REG3AQ06141 175 aa7.7□□□□□ -1.18
VCL-201ENST00000211998 C11orf45Q8TAV5 145 aa7.7□□□□□ -1.18
VCL-201ENST00000211998 CRYGAP11844 174 aa7.7□□□□□ -1.18
VCL-201ENST00000211998 CASC2Q6XLA1 102 aa7.7□□□□□ -1.18
VCL-201ENST00000211998 KIR2DL5BQ8NHK3 375 aa7.7□□□□□ -1.18
VCL-201ENST00000211998 XAGE1AQ9HD64 81 aa7.69□□□□□ -1.18
VCL-201ENST00000211998 SMCPP49901 116 aaPredicted RBP7.69□□□□□ -1.18
VCL-201ENST00000211998 FAM19A1Q7Z5A9 133 aa7.69□□□□□ -1.18
VCL-201ENST00000211998 PCNX3Q9H6A9 2034 aa7.69□□□□□ -1.18
VCL-201ENST00000211998 A0A087WYN8 130 aa7.69□□□□□ -1.18
VCL-201ENST00000211998 WISP2O76076 250 aa7.69□□□□□ -1.18
VCL-201ENST00000211998 Q8N3U1 123 aa7.69□□□□□ -1.18
VCL-201ENST00000211998 B9D2Q9BPU9 175 aa7.69□□□□□ -1.18
VCL-201ENST00000211998 K7EQG2 157 aa7.68□□□□□ -1.18
VCL-201ENST00000211998 K7ERS5 55 aa7.68□□□□□ -1.18
VCL-201ENST00000211998 TMEM131Q92545 1883 aa7.68□□□□□ -1.18
VCL-201ENST00000211998 C2orf16Q68DN1 1984 aa7.68□□□□□ -1.18
VCL-201ENST00000211998 ADAMTSL4-AS1Q5T5F5 129 aa7.68□□□□□ -1.18
VCL-201ENST00000211998 TNCP24821 2201 aa7.68□□□□□ -1.18
VCL-201ENST00000211998 C19orf84I3L1E1 186 aa7.68□□□□□ -1.18
VCL-201ENST00000211998 HILS1P60008 231 aa7.68□□□□□ -1.18
VCL-201ENST00000211998 RPL28P46779 137 aaKnown RBP7.67□□□□□ -1.18
VCL-201ENST00000211998 HIGD2AQ9BW72 106 aa7.67□□□□□ -1.18
VCL-201ENST00000211998 WFDC10AQ9H1F0 79 aa7.67□□□□□ -1.18
VCL-201ENST00000211998 DEFB114Q30KQ6 69 aa7.67□□□□□ -1.18
VCL-201ENST00000211998 LINC00846Q9NV44 126 aa7.67□□□□□ -1.18
VCL-201ENST00000211998 ZNF106Q9H2Y7 1883 aaKnown RBP7.67□□□□□ -1.18
VCL-201ENST00000211998 A0A096LNI7 61 aa7.67□□□□□ -1.18
VCL-201ENST00000211998 Q8N9L7 120 aa7.67□□□□□ -1.18
VCL-201ENST00000211998 PRO0461Q9UI25 63 aa7.67□□□□□ -1.18
VCL-201ENST00000211998 CRYGDP07320 174 aa7.65□□□□□ -1.18
VCL-201ENST00000211998 TMEM254Q8TBM7 123 aa7.65□□□□□ -1.18
VCL-201ENST00000211998 TECTAO75443 2155 aa7.65□□□□□ -1.18
VCL-201ENST00000211998 ADAMTS9Q9P2N4 1935 aa7.65□□□□□ -1.18
VCL-201ENST00000211998 FAM208BQ5VWN6 2430 aa7.65□□□□□ -1.18
VCL-201ENST00000211998 MUC6Q6W4X9 2439 aa7.65□□□□□ -1.18
VCL-201ENST00000211998 ESRGQ1W209 222 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 192 ms