RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 UBE2D3P61077 147 aa13.88□□□□□ -0.19
TNFRSF1A-201ENST00000162749 UBE2D2P62837 147 aa13.88□□□□□ -0.19
TNFRSF1A-201ENST00000162749 SVIPQ8NHG7 77 aa13.88□□□□□ -0.19
TNFRSF1A-201ENST00000162749 CELA1Q9UNI1 258 aa13.88□□□□□ -0.19
TNFRSF1A-201ENST00000162749 LOC100131303A0A0U1RQF7 123 aa13.88□□□□□ -0.19
TNFRSF1A-201ENST00000162749 GAGE12JA6NER3 117 aa13.88□□□□□ -0.19
TNFRSF1A-201ENST00000162749 GAGE4Q13068 117 aa13.88□□□□□ -0.19
TNFRSF1A-201ENST00000162749 GAGE5Q13069 117 aa13.88□□□□□ -0.19
TNFRSF1A-201ENST00000162749 PMVKQ15126 192 aa13.88□□□□□ -0.19
TNFRSF1A-201ENST00000162749 GAGE13Q4V321 117 aa13.88□□□□□ -0.19
TNFRSF1A-201ENST00000162749 C11orf86A6NJI1 115 aa13.87□□□□□ -0.19
TNFRSF1A-201ENST00000162749 E9PLD3 99 aa13.87□□□□□ -0.19
TNFRSF1A-201ENST00000162749 CHCHD7Q9BUK0 85 aa13.87□□□□□ -0.19
TNFRSF1A-201ENST00000162749 RETNQ9HD89 108 aa13.87□□□□□ -0.19
TNFRSF1A-201ENST00000162749 RAB37Q96AX2 223 aa13.87□□□□□ -0.19
TNFRSF1A-201ENST00000162749 NAA38Q9BRA0 125 aaKnown RBP13.87□□□□□ -0.19
TNFRSF1A-201ENST00000162749 TM2D2Q9BX73 214 aa13.87□□□□□ -0.19
TNFRSF1A-201ENST00000162749 PRB2P02812 416 aaPredicted RBP13.86□□□□□ -0.19
TNFRSF1A-201ENST00000162749 DAZ4Q86SG3 579 aaKnown RBP13.86□□□□□ -0.19
TNFRSF1A-201ENST00000162749 CEND1Q8N111 149 aa13.86□□□□□ -0.19
TNFRSF1A-201ENST00000162749 DAZ3Q9NR90 486 aaKnown RBP13.86□□□□□ -0.19
TNFRSF1A-201ENST00000162749 MYMXA0A1B0GTQ4 84 aa13.86□□□□□ -0.19
TNFRSF1A-201ENST00000162749 PRADC1Q9BSG0 188 aa13.86□□□□□ -0.19
TNFRSF1A-201ENST00000162749 H3BUT2 72 aa13.85□□□□□ -0.19
TNFRSF1A-201ENST00000162749 OPRPNQ99935 248 aaPredicted RBP13.84□□□□□ -0.19
TNFRSF1A-201ENST00000162749 DAD1P61803 113 aa13.84□□□□□ -0.19
TNFRSF1A-201ENST00000162749 SPART-AS1P0CW21 52 aa13.83□□□□□ -0.2
TNFRSF1A-201ENST00000162749 NTM-AS1Q6ZSK4 140 aa13.83□□□□□ -0.2
TNFRSF1A-201ENST00000162749 SMIM13P0DJ93 91 aa13.82□□□□□ -0.2
TNFRSF1A-201ENST00000162749 LINC00694P0DN24 101 aa13.82□□□□□ -0.2
TNFRSF1A-201ENST00000162749 CRYBA4P53673 196 aa13.82□□□□□ -0.2
TNFRSF1A-201ENST00000162749 TAL2Q16559 108 aa13.82□□□□□ -0.2
TNFRSF1A-201ENST00000162749 KPRPQ5T749 579 aaPredicted RBP13.82□□□□□ -0.2
TNFRSF1A-201ENST00000162749 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.82□□□□□ -0.2
TNFRSF1A-201ENST00000162749 IGKV2-29A2NJV5 120 aaPredicted RBP13.82□□□□□ -0.2
TNFRSF1A-201ENST00000162749 K7ERJ3 54 aa13.82□□□□□ -0.2
TNFRSF1A-201ENST00000162749 PAPPA-AS1Q5QFB9 102 aa13.82□□□□□ -0.2
TNFRSF1A-201ENST00000162749 PRO0255Q9UI72 69 aa13.82□□□□□ -0.2
TNFRSF1A-201ENST00000162749 PYGO1Q9Y3Y4 419 aa13.82□□□□□ -0.2
TNFRSF1A-201ENST00000162749 TMEM238C9JI98 176 aa13.8□□□□□ -0.2
TNFRSF1A-201ENST00000162749 K7EIL1 84 aa13.8□□□□□ -0.2
TNFRSF1A-201ENST00000162749 CEMP1Q6PRD7 247 aaPredicted RBP13.8□□□□□ -0.2
TNFRSF1A-201ENST00000162749 FAM104AQ969W3 186 aa13.8□□□□□ -0.2
TNFRSF1A-201ENST00000162749 IGLV4-3A0A075B6K6 122 aa13.8□□□□□ -0.2
TNFRSF1A-201ENST00000162749 UBE2D4Q9Y2X8 147 aa13.8□□□□□ -0.2
TNFRSF1A-201ENST00000162749 GAGE10A6NGK3 116 aa13.79□□□□□ -0.2
TNFRSF1A-201ENST00000162749 ATP5G1P05496 136 aa13.79□□□□□ -0.2
TNFRSF1A-201ENST00000162749 SBSPONQ8IVN8 264 aa13.79□□□□□ -0.2
TNFRSF1A-201ENST00000162749 HIST1H4GQ99525 98 aa13.79□□□□□ -0.2
TNFRSF1A-201ENST00000162749 NHP2Q9NX24 153 aaKnown RBP13.79□□□□□ -0.2
TNFRSF1A-201ENST00000162749 GYPEP15421 78 aa13.79□□□□□ -0.2
TNFRSF1A-201ENST00000162749 GTSF1LQ9H1H1 148 aa13.79□□□□□ -0.2
TNFRSF1A-201ENST00000162749 A0A1W2PPM0 123 aa13.78□□□□□ -0.2
TNFRSF1A-201ENST00000162749 ZNF815PA8K554 130 aa13.78□□□□□ -0.2
TNFRSF1A-201ENST00000162749 PLEKHB2Q96CS7 222 aa13.78□□□□□ -0.2
TNFRSF1A-201ENST00000162749 GTF2H5Q6ZYL4 71 aa13.77□□□□□ -0.21
TNFRSF1A-201ENST00000162749 NFE4Q86UQ8 179 aa13.77□□□□□ -0.21
TNFRSF1A-201ENST00000162749 SPANXA1Q9NS26 97 aa13.77□□□□□ -0.21
TNFRSF1A-201ENST00000162749 TEX48A0A1B0GUV7 120 aa13.76□□□□□ -0.21
TNFRSF1A-201ENST00000162749 K7EP34 96 aa13.76□□□□□ -0.21
TNFRSF1A-201ENST00000162749 TMEM170BQ5T4T1 132 aa13.76□□□□□ -0.21
TNFRSF1A-201ENST00000162749 TSPEAR-AS2P59090 65 aa13.76□□□□□ -0.21
TNFRSF1A-201ENST00000162749 VSIG2Q96IQ7 327 aa13.76□□□□□ -0.21
TNFRSF1A-201ENST00000162749 C11orf68Q9H3H3 251 aaKnown RBP13.76□□□□□ -0.21
TNFRSF1A-201ENST00000162749 COL7A1Q02388 2944 aa13.75□□□□□ -0.21
TNFRSF1A-201ENST00000162749 PAX4O43316 350 aa13.75□□□□□ -0.21
TNFRSF1A-201ENST00000162749 HERVK_113P61574 105 aa13.75□□□□□ -0.21
TNFRSF1A-201ENST00000162749 DNHD1Q96M86 4753 aa13.75□□□□□ -0.21
TNFRSF1A-201ENST00000162749 HUWE1Q7Z6Z7 4374 aaKnown RBP13.75□□□□□ -0.21
TNFRSF1A-201ENST00000162749 VCX2Q9H322 139 aa13.75□□□□□ -0.21
TNFRSF1A-201ENST00000162749 C12orf74Q32Q52 190 aa13.74□□□□□ -0.21
TNFRSF1A-201ENST00000162749 AMELXQ99217 191 aa13.74□□□□□ -0.21
TNFRSF1A-201ENST00000162749 A0A0J9YY99 117 aa13.74□□□□□ -0.21
TNFRSF1A-201ENST00000162749 F5H768 121 aa13.74□□□□□ -0.21
TNFRSF1A-201ENST00000162749 RNASE13Q5GAN3 156 aaKnown RBP13.74□□□□□ -0.21
TNFRSF1A-201ENST00000162749 TRAV26-1A0A087WT03 109 aa13.73□□□□□ -0.21
TNFRSF1A-201ENST00000162749 DEFB121Q5J5C9 76 aa13.73□□□□□ -0.21
TNFRSF1A-201ENST00000162749 TIMM21Q9BVV7 248 aa13.73□□□□□ -0.21
TNFRSF1A-201ENST00000162749 TRBV6-8A0A0A6YYG3 113 aa13.72□□□□□ -0.21
TNFRSF1A-201ENST00000162749 HTN3P15516 51 aa13.72□□□□□ -0.21
TNFRSF1A-201ENST00000162749 Q6ZUT4 128 aa13.72□□□□□ -0.21
TNFRSF1A-201ENST00000162749 ATP6V0E2Q8NHE4 81 aa13.72□□□□□ -0.21
TNFRSF1A-201ENST00000162749 SPCS1Q9Y6A9 102 aa13.72□□□□□ -0.21
TNFRSF1A-201ENST00000162749 SCGB1D4Q6XE38 83 aa13.72□□□□□ -0.21
TNFRSF1A-201ENST00000162749 TMEM243Q9BU79 118 aa13.72□□□□□ -0.21
TNFRSF1A-201ENST00000162749 A0A0J9YWU9 116 aa13.71□□□□□ -0.21
TNFRSF1A-201ENST00000162749 A0A0J9YXV3 536 aa13.71□□□□□ -0.21
TNFRSF1A-201ENST00000162749 TMEM238LA0A1B0GVL6 79 aa13.71□□□□□ -0.21
TNFRSF1A-201ENST00000162749 A0A1B0GWB2 263 aa13.71□□□□□ -0.22
TNFRSF1A-201ENST00000162749 TMEM223A0PJW6 202 aa13.71□□□□□ -0.22
TNFRSF1A-201ENST00000162749 IGLL5B9A064 214 aa13.71□□□□□ -0.22
TNFRSF1A-201ENST00000162749 FABP2P12104 132 aa13.71□□□□□ -0.22
TNFRSF1A-201ENST00000162749 ZNF22P17026 224 aaPredicted RBP13.71□□□□□ -0.22
TNFRSF1A-201ENST00000162749 MRAPQ8TCY5 172 aa13.71□□□□□ -0.22
TNFRSF1A-201ENST00000162749 TM2D3Q9BRN9 247 aa13.71□□□□□ -0.22
TNFRSF1A-201ENST00000162749 STAB2Q8WWQ8 2551 aa13.7□□□□□ -0.22
TNFRSF1A-201ENST00000162749 MRPS36P82909 103 aaKnown RBP13.7□□□□□ -0.22
TNFRSF1A-201ENST00000162749 DGAT2L7PQ6IED9 249 aa13.7□□□□□ -0.22
TNFRSF1A-201ENST00000162749 SPATA25Q9BR10 227 aa13.7□□□□□ -0.22
TNFRSF1A-201ENST00000162749 CSDC2Q9Y534 153 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms