RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 A0A0B4J2C4 111 aa12.27□□□□□ -0.45
CTDP1-201ENST00000075430 SLURP1P55000 103 aa12.27□□□□□ -0.45
CTDP1-201ENST00000075430 PRORYQ9H606 182 aa12.27□□□□□ -0.45
CTDP1-201ENST00000075430 SHISA2Q6UWI4 295 aa12.26□□□□□ -0.45
CTDP1-201ENST00000075430 MED14OSP0DP75 135 aa12.25□□□□□ -0.45
CTDP1-201ENST00000075430 FAM19A4Q96LR4 140 aa12.25□□□□□ -0.45
CTDP1-201ENST00000075430 IGHV1-58A0A0C4DH39 117 aa12.25□□□□□ -0.45
CTDP1-201ENST00000075430 RHOHQ15669 191 aa12.25□□□□□ -0.45
CTDP1-201ENST00000075430 PIK3CD-AS1Q5SR53 167 aa12.25□□□□□ -0.45
CTDP1-201ENST00000075430 SBSPONQ8IVN8 264 aa12.25□□□□□ -0.45
CTDP1-201ENST00000075430 A0A1W2PRX2 142 aa12.24□□□□□ -0.45
CTDP1-201ENST00000075430 PRIMA1Q86XR5 153 aa12.24□□□□□ -0.45
CTDP1-201ENST00000075430 C9orf85Q96MD7 179 aa12.24□□□□□ -0.45
CTDP1-201ENST00000075430 GCN1Q92616 2671 aaKnown RBP12.24□□□□□ -0.45
CTDP1-201ENST00000075430 COX6A2Q02221 97 aa12.24□□□□□ -0.45
CTDP1-201ENST00000075430 NSUN5P1Q3KNT7 163 aa12.23□□□□□ -0.45
CTDP1-201ENST00000075430 GAGE2AQ6NT46 116 aa12.23□□□□□ -0.45
CTDP1-201ENST00000075430 A6NDX4 124 aa12.23□□□□□ -0.45
CTDP1-201ENST00000075430 Q8N2B8 174 aa12.23□□□□□ -0.45
CTDP1-201ENST00000075430 VSIG2Q96IQ7 327 aa12.23□□□□□ -0.45
CTDP1-201ENST00000075430 TRBV7-9A0A0J9YWB2 115 aa12.22□□□□□ -0.45
CTDP1-201ENST00000075430 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.22□□□□□ -0.45
CTDP1-201ENST00000075430 TRGV1A0A0A0MS02 117 aa12.22□□□□□ -0.45
CTDP1-201ENST00000075430 MRPL23Q16540 153 aaKnown RBP12.22□□□□□ -0.45
CTDP1-201ENST00000075430 CIRBPQ14011 172 aaKnown RBP12.21□□□□□ -0.45
CTDP1-201ENST00000075430 TRBV6-5A0A0K0K1A5 114 aa12.21□□□□□ -0.45
CTDP1-201ENST00000075430 RPL32P62910 135 aaKnown RBP12.21□□□□□ -0.45
CTDP1-201ENST00000075430 MIAQ16674 131 aa12.21□□□□□ -0.45
CTDP1-201ENST00000075430 TRBV30A0A0K0K1B3 111 aa12.21□□□□□ -0.46
CTDP1-201ENST00000075430 RNASE1P07998 156 aaKnown RBP12.2□□□□□ -0.46
CTDP1-201ENST00000075430 TMEM61Q8N0U2 210 aa12.2□□□□□ -0.46
CTDP1-201ENST00000075430 LITAFQ99732 161 aa12.2□□□□□ -0.46
CTDP1-201ENST00000075430 KLK5Q9Y337 293 aaPredicted RBP12.2□□□□□ -0.46
CTDP1-201ENST00000075430 K7EQG2 157 aa12.19□□□□□ -0.46
CTDP1-201ENST00000075430 TMEM101Q96IK0 257 aa12.19□□□□□ -0.46
CTDP1-201ENST00000075430 LINC00694P0DN24 101 aa12.18□□□□□ -0.46
CTDP1-201ENST00000075430 DYNLRB2Q8TF09 96 aa12.18□□□□□ -0.46
CTDP1-201ENST00000075430 C19orf54Q5BKX5 351 aa12.18□□□□□ -0.46
CTDP1-201ENST00000075430 OR13C6PQ8NH95 151 aa12.18□□□□□ -0.46
CTDP1-201ENST00000075430 USP24Q9UPU5 2620 aa12.17□□□□□ -0.46
CTDP1-201ENST00000075430 ATP5G1P05496 136 aa12.17□□□□□ -0.46
CTDP1-201ENST00000075430 BAALC-AS2P0C853 105 aa12.17□□□□□ -0.46
CTDP1-201ENST00000075430 PFN2P35080 140 aa12.16□□□□□ -0.46
CTDP1-201ENST00000075430 DAZ2Q13117 558 aaKnown RBP12.16□□□□□ -0.46
CTDP1-201ENST00000075430 DAZ4Q86SG3 579 aaKnown RBP12.16□□□□□ -0.46
CTDP1-201ENST00000075430 DAZ3Q9NR90 486 aaKnown RBP12.16□□□□□ -0.46
CTDP1-201ENST00000075430 MRPS36P82909 103 aaKnown RBP12.16□□□□□ -0.46
CTDP1-201ENST00000075430 LST1O00453 97 aa12.16□□□□□ -0.46
CTDP1-201ENST00000075430 UBE2D4Q9Y2X8 147 aa12.16□□□□□ -0.46
CTDP1-201ENST00000075430 SVIPQ8NHG7 77 aa12.15□□□□□ -0.46
CTDP1-201ENST00000075430 IGKV3D-7A0A0C4DH55 119 aa12.15□□□□□ -0.46
CTDP1-201ENST00000075430 IGLV1-40P01703 118 aa12.15□□□□□ -0.46
CTDP1-201ENST00000075430 C9orf153Q5TBE3 101 aa12.15□□□□□ -0.46
CTDP1-201ENST00000075430 LINC01356Q8N9X3 169 aa12.15□□□□□ -0.46
CTDP1-201ENST00000075430 FAM104AQ969W3 186 aa12.15□□□□□ -0.47
CTDP1-201ENST00000075430 EDA2RQ9HAV5 297 aa12.15□□□□□ -0.47
CTDP1-201ENST00000075430 LINC00308Q8TCZ7 52 aa12.14□□□□□ -0.47
CTDP1-201ENST00000075430 CHCHD7Q9BUK0 85 aa12.14□□□□□ -0.47
CTDP1-201ENST00000075430 KRTAP10-9P60411 292 aa12.14□□□□□ -0.47
CTDP1-201ENST00000075430 CITED2Q99967 270 aaPredicted RBP12.14□□□□□ -0.47
CTDP1-201ENST00000075430 FLNAP21333 2647 aaKnown RBP12.14□□□□□ -0.47
CTDP1-201ENST00000075430 YAE1D1Q9NRH1 226 aa12.13□□□□□ -0.47
CTDP1-201ENST00000075430 TINCRA0A1B0GVN0 87 aa12.13□□□□□ -0.47
CTDP1-201ENST00000075430 RBMY1BA6NDE4 496 aaKnown RBP12.13□□□□□ -0.47
CTDP1-201ENST00000075430 RBMY1EA6NEQ0 496 aaKnown RBP12.13□□□□□ -0.47
CTDP1-201ENST00000075430 RBMY1DP0C7P1 496 aaKnown RBP12.13□□□□□ -0.47
CTDP1-201ENST00000075430 PSMB8P28062 276 aa12.12□□□□□ -0.47
CTDP1-201ENST00000075430 LINC00158P58513 81 aa12.12□□□□□ -0.47
CTDP1-201ENST00000075430 HIST2H2BCQ6DN03 193 aa12.12□□□□□ -0.47
CTDP1-201ENST00000075430 SOSTDC1Q6X4U4 206 aa12.12□□□□□ -0.47
CTDP1-201ENST00000075430 PLA2G2AP14555 144 aa12.12□□□□□ -0.47
CTDP1-201ENST00000075430 SLPIP03973 132 aa12.12□□□□□ -0.47
CTDP1-201ENST00000075430 H3BT86 120 aa12.11□□□□□ -0.47
CTDP1-201ENST00000075430 ZNF415Q09FC8 603 aa12.11□□□□□ -0.47
CTDP1-201ENST00000075430 K7EMT4 169 aa12.1□□□□□ -0.47
CTDP1-201ENST00000075430 SDIM1Q6ZPB5 146 aa12.1□□□□□ -0.47
CTDP1-201ENST00000075430 LOC107984640A0A0U1RRK4 108 aa12.1□□□□□ -0.47
CTDP1-201ENST00000075430 FAM218AQ96MZ4 157 aa12.1□□□□□ -0.47
CTDP1-201ENST00000075430 CLPSL2Q6UWE3 100 aa12.09□□□□□ -0.47
CTDP1-201ENST00000075430 SMCR5Q8TEV8 140 aa12.09□□□□□ -0.47
CTDP1-201ENST00000075430 PPDPFQ9H3Y8 114 aa12.09□□□□□ -0.47
CTDP1-201ENST00000075430 UBE2L6O14933 153 aa12.09□□□□□ -0.47
CTDP1-201ENST00000075430 C14orf132Q9NPU4 83 aa12.09□□□□□ -0.47
CTDP1-201ENST00000075430 APCP25054 2843 aa12.09□□□□□ -0.47
CTDP1-201ENST00000075430 LOC100131303A0A0U1RQF7 123 aa12.08□□□□□ -0.47
CTDP1-201ENST00000075430 DNAL4O96015 105 aa12.08□□□□□ -0.47
CTDP1-201ENST00000075430 Q6ZTI0 123 aa12.08□□□□□ -0.47
CTDP1-201ENST00000075430 Q96MF0 132 aa12.08□□□□□ -0.48
CTDP1-201ENST00000075430 LINC00242Q5T6M2 205 aa12.08□□□□□ -0.48
CTDP1-201ENST00000075430 C5orf38Q86SI9 138 aa12.08□□□□□ -0.48
CTDP1-201ENST00000075430 ITPR3Q14573 2671 aa12.08□□□□□ -0.48
CTDP1-201ENST00000075430 SETXQ7Z333 2677 aaKnown RBP12.08□□□□□ -0.48
CTDP1-201ENST00000075430 H3BUA1 57 aa12.07□□□□□ -0.48
CTDP1-201ENST00000075430 SPANXDQ9BXN6 97 aa12.07□□□□□ -0.48
CTDP1-201ENST00000075430 SPANXCQ9NY87 97 aa12.07□□□□□ -0.48
CTDP1-201ENST00000075430 FASNP49327 2511 aaKnown RBP12.07□□□□□ -0.48
CTDP1-201ENST00000075430 TRGV2A0A075B6R0 118 aa12.06□□□□□ -0.48
CTDP1-201ENST00000075430 RPL35AP18077 110 aaKnown RBP12.06□□□□□ -0.48
CTDP1-201ENST00000075430 MIR7-3HGQ8N6C7 128 aa12.06□□□□□ -0.48
CTDP1-201ENST00000075430 SPANXA1Q9NS26 97 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms