RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 IGHV3-73A0A0B4J1V6 119 aa15.67■□□□□ 0.1
HOXC8-201ENST00000040584 GAGE7O76087 117 aa15.67■□□□□ 0.1
HOXC8-201ENST00000040584 GAGE12FP0CL80 117 aa15.67■□□□□ 0.1
HOXC8-201ENST00000040584 GAGE12GP0CL81 117 aa15.67■□□□□ 0.1
HOXC8-201ENST00000040584 GAGE12IP0CL82 117 aa15.67■□□□□ 0.1
HOXC8-201ENST00000040584 RPL39P62891 51 aaKnown RBP15.67■□□□□ 0.1
HOXC8-201ENST00000040584 NFE4Q86UQ8 179 aa15.67■□□□□ 0.1
HOXC8-201ENST00000040584 F8W1H4 67 aa15.66■□□□□ 0.1
HOXC8-201ENST00000040584 RS1O15537 224 aa15.66■□□□□ 0.1
HOXC8-201ENST00000040584 SRSF9Q13242 221 aaKnown RBP eCLIP15.65■□□□□ 0.1
HOXC8-201ENST00000040584 C20orf203Q8NBC4 194 aa15.65■□□□□ 0.1
HOXC8-201ENST00000040584 CRYBA4P53673 196 aa15.65■□□□□ 0.1
HOXC8-201ENST00000040584 NACAE9PAV3 2078 aa15.64■□□□□ 0.09
HOXC8-201ENST00000040584 SPANXB1Q9NS25 103 aaPredicted RBP15.64■□□□□ 0.09
HOXC8-201ENST00000040584 TRGV2A0A075B6R0 118 aa15.63■□□□□ 0.09
HOXC8-201ENST00000040584 RHODO00212 210 aa15.63■□□□□ 0.09
HOXC8-201ENST00000040584 FAM222AQ5U5X8 452 aa15.63■□□□□ 0.09
HOXC8-201ENST00000040584 IGHV3-53P01767 116 aa15.63■□□□□ 0.09
HOXC8-201ENST00000040584 DEFB130BP0DP73 79 aa15.63■□□□□ 0.09
HOXC8-201ENST00000040584 DEFB130AP0DP74 79 aa15.63■□□□□ 0.09
HOXC8-201ENST00000040584 TMEM170BQ5T4T1 132 aa15.63■□□□□ 0.09
HOXC8-201ENST00000040584 PYGO1Q9Y3Y4 419 aa15.62■□□□□ 0.09
HOXC8-201ENST00000040584 TRAV4A0A0B4J268 109 aa15.61■□□□□ 0.09
HOXC8-201ENST00000040584 P0DMU3 169 aa15.61■□□□□ 0.09
HOXC8-201ENST00000040584 FAM231AP0DMU4 169 aa15.61■□□□□ 0.09
HOXC8-201ENST00000040584 FAM231CP0DMU5 169 aa15.61■□□□□ 0.09
HOXC8-201ENST00000040584 Q6ZSN1 163 aa15.61■□□□□ 0.09
HOXC8-201ENST00000040584 LINC00612Q8N6U2 182 aa15.61■□□□□ 0.09
HOXC8-201ENST00000040584 A0A0J9YY99 117 aa15.6■□□□□ 0.09
HOXC8-201ENST00000040584 LYRM9A8MSI8 78 aa15.6■□□□□ 0.09
HOXC8-201ENST00000040584 ZNRF2Q8NHG8 242 aa15.6■□□□□ 0.09
HOXC8-201ENST00000040584 VCX2Q9H322 139 aa15.6■□□□□ 0.09
HOXC8-201ENST00000040584 LGALS3P17931 250 aaKnown RBP15.59■□□□□ 0.09
HOXC8-201ENST00000040584 TM2D3Q9BRN9 247 aa15.59■□□□□ 0.09
HOXC8-201ENST00000040584 CELA1Q9UNI1 258 aa15.59■□□□□ 0.09
HOXC8-201ENST00000040584 LEPROTO15243 131 aa15.59■□□□□ 0.09
HOXC8-201ENST00000040584 UBE2D1P51668 147 aa15.59■□□□□ 0.09
HOXC8-201ENST00000040584 SLC25A29Q8N8R3 303 aa15.59■□□□□ 0.09
HOXC8-201ENST00000040584 PLEKHB2Q96CS7 222 aa15.59■□□□□ 0.09
HOXC8-201ENST00000040584 SPATA25Q9BR10 227 aa15.59■□□□□ 0.09
HOXC8-201ENST00000040584 TNFRSF18Q9Y5U5 241 aa15.59■□□□□ 0.09
HOXC8-201ENST00000040584 TENM3Q9P273 2699 aa15.58■□□□□ 0.08
HOXC8-201ENST00000040584 J3QQQ9 107 aa15.58■□□□□ 0.08
HOXC8-201ENST00000040584 LYRM7Q5U5X0 104 aa15.57■□□□□ 0.08
HOXC8-201ENST00000040584 TMEM223A0PJW6 202 aa15.57■□□□□ 0.08
HOXC8-201ENST00000040584 DNAJC30Q96LL9 226 aa15.57■□□□□ 0.08
HOXC8-201ENST00000040584 SPART-AS1P0CW21 52 aa15.55■□□□□ 0.08
HOXC8-201ENST00000040584 IGLV4-3A0A075B6K6 122 aa15.54■□□□□ 0.08
HOXC8-201ENST00000040584 J3QR89 54 aa15.54■□□□□ 0.08
HOXC8-201ENST00000040584 CIDEAO60543 219 aa15.54■□□□□ 0.08
HOXC8-201ENST00000040584 GAGE13Q4V321 117 aa15.54■□□□□ 0.08
HOXC8-201ENST00000040584 DEFB104AQ8WTQ1 72 aa15.54■□□□□ 0.08
HOXC8-201ENST00000040584 PGPEP1Q9NXJ5 209 aa15.54■□□□□ 0.08
HOXC8-201ENST00000040584 Q9UF83 564 aa15.54■□□□□ 0.08
HOXC8-201ENST00000040584 DAD1P61803 113 aa15.53■□□□□ 0.08
HOXC8-201ENST00000040584 HUWE1Q7Z6Z7 4374 aaKnown RBP15.53■□□□□ 0.08
HOXC8-201ENST00000040584 RPL24P83731 157 aaKnown RBP15.52■□□□□ 0.08
HOXC8-201ENST00000040584 AMELXQ99217 191 aa15.52■□□□□ 0.08
HOXC8-201ENST00000040584 C11orf68Q9H3H3 251 aaKnown RBP15.52■□□□□ 0.08
HOXC8-201ENST00000040584 TRGV4A0A0C4DH28 118 aa15.52■□□□□ 0.07
HOXC8-201ENST00000040584 A0A0J9YWU9 116 aa15.52■□□□□ 0.07
HOXC8-201ENST00000040584 IGHV3-30P01768 117 aa15.52■□□□□ 0.07
HOXC8-201ENST00000040584 IGHV3-30-5P0DP03 117 aa15.52■□□□□ 0.07
HOXC8-201ENST00000040584 FHL2Q14192 279 aa15.52■□□□□ 0.07
HOXC8-201ENST00000040584 ZNF22P17026 224 aaPredicted RBP15.51■□□□□ 0.07
HOXC8-201ENST00000040584 SPANXA1Q9NS26 97 aa15.51■□□□□ 0.07
HOXC8-201ENST00000040584 H3BMG7 143 aa15.5■□□□□ 0.07
HOXC8-201ENST00000040584 B9D2Q9BPU9 175 aa15.5■□□□□ 0.07
HOXC8-201ENST00000040584 TSPEAR-AS2P59090 65 aa15.5■□□□□ 0.07
HOXC8-201ENST00000040584 OPRPNQ99935 248 aaPredicted RBP15.5■□□□□ 0.07
HOXC8-201ENST00000040584 MRPS36P82909 103 aaKnown RBP15.49■□□□□ 0.07
HOXC8-201ENST00000040584 DNAH9Q9NYC9 4486 aa15.48■□□□□ 0.07
HOXC8-201ENST00000040584 TEX48A0A1B0GUV7 120 aa15.48■□□□□ 0.07
HOXC8-201ENST00000040584 K7EQD1 137 aa15.48■□□□□ 0.07
HOXC8-201ENST00000040584 MEGF8Q7Z7M0 2845 aa15.47■□□□□ 0.07
HOXC8-201ENST00000040584 A0A0J9YXV3 536 aa15.47■□□□□ 0.07
HOXC8-201ENST00000040584 TRBV6-4A0A1B0GX49 114 aa15.47■□□□□ 0.07
HOXC8-201ENST00000040584 TRBV20-1A0A075B6N2 111 aa15.46■□□□□ 0.07
HOXC8-201ENST00000040584 TRBV10-1A0A0K0K1A3 114 aa15.46■□□□□ 0.07
HOXC8-201ENST00000040584 TMEM238C9JI98 176 aa15.46■□□□□ 0.07
HOXC8-201ENST00000040584 COTL1Q14019 142 aa15.46■□□□□ 0.07
HOXC8-201ENST00000040584 WFDC2Q14508 124 aa15.46■□□□□ 0.07
HOXC8-201ENST00000040584 TSPAN13O95857 204 aa15.46■□□□□ 0.06
HOXC8-201ENST00000040584 UBE2D3P61077 147 aa15.46■□□□□ 0.06
HOXC8-201ENST00000040584 UBE2D2P62837 147 aa15.46■□□□□ 0.06
HOXC8-201ENST00000040584 APOMO95445 188 aa15.45■□□□□ 0.06
HOXC8-201ENST00000040584 ATP5G1P05496 136 aa15.45■□□□□ 0.06
HOXC8-201ENST00000040584 PRO0461Q9UI25 63 aa15.45■□□□□ 0.06
HOXC8-201ENST00000040584 TINCRA0A1B0GVN0 87 aa15.44■□□□□ 0.06
HOXC8-201ENST00000040584 C10orf126Q8N4M7 172 aa15.44■□□□□ 0.06
HOXC8-201ENST00000040584 PRO1854Q9UHT4 67 aa15.44■□□□□ 0.06
HOXC8-201ENST00000040584 LOC100131303A0A0U1RQF7 123 aa15.44■□□□□ 0.06
HOXC8-201ENST00000040584 CFC1BP0CG36 223 aa15.44■□□□□ 0.06
HOXC8-201ENST00000040584 CFC1P0CG37 223 aa15.44■□□□□ 0.06
HOXC8-201ENST00000040584 HTN3P15516 51 aa15.44■□□□□ 0.06
HOXC8-201ENST00000040584 CHCHD7Q9BUK0 85 aa15.44■□□□□ 0.06
HOXC8-201ENST00000040584 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.43■□□□□ 0.06
HOXC8-201ENST00000040584 C21orf62-AS1Q17RA5 79 aa15.42■□□□□ 0.06
HOXC8-201ENST00000040584 C11orf45Q8TAV5 145 aa15.42■□□□□ 0.06
HOXC8-201ENST00000040584 TIMM21Q9BVV7 248 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms