RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Gm5615Q3UW02 101 aa14□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Prima1Q810F0 153 aa14□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Prss8Q9ESD1 342 aa14□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Znf431E9QAG8 526 aa14□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Pax8Q00288 457 aa14□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Treml4Q3LRV9 263 aa13.99□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Srsf6Q3TWW8 339 aaKnown RBP13.99□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Zfp983E9PUT0 460 aa13.99□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Hist1h2bmP10854 126 aa13.99□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Hist1h2bhQ64478 126 aa13.99□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Hist2h2bbQ64525 126 aa13.99□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Hist1h2bcQ6ZWY9 126 aaKnown RBP13.99□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Rtn4rQ99PI8 473 aa13.99□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 4930544G11RikQ9CR99 193 aa13.99□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 3100002H09RikQ9CXW6 140 aa13.99□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 C2cd3Q52KB6 2323 aa13.99□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Spint5J3KMK8 105 aa13.99□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Defa26Q3L180 93 aa13.99□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Srsf7Q8BL97 267 aaKnown RBP13.99□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 GrhprQ91Z53 328 aa13.99□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Phpt1Q9DAK9 124 aa13.99□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Cd200r5Q8BTP3 270 aa13.99□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Ccl2P10148 148 aa13.99□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Tmem136Q3TYE7 245 aa13.99□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Slamf6Q9ET39 351 aa13.99□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Trbv17A0A140T8P8 114 aa13.99□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Vmn1r197Q8R265 298 aa13.99□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Spred3Q6P6N5 408 aa13.98□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Prss41Q920S2 322 aa13.98□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Frrs1lB1AXV0 293 aa13.98□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Gm21789J3QMZ1 123 aa13.98□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Gm21870J3QPN2 123 aa13.98□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Gm21883J3QPV3 123 aa13.98□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Ccl11P48298 97 aa13.98□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Nhlrc4Q3UP44 136 aa13.98□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Dmrt3Q80WT2 476 aa13.98□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Siglec12Q91Y57 467 aa13.98□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Sorl1O88307 2215 aaKnown RBP13.98□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Mbnl2Q8C181 373 aaKnown RBP13.98□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Saa3P04918 122 aa13.98□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Timp3P39876 211 aa13.98□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Gm5089A1L3C8 106 aa13.97□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Gm614Q3V2K1 191 aa13.97□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 St6galnac3Q9WUV2 305 aa13.97□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Trdv5A0A075B661 115 aa13.97□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Gm17727E9Q4V7 109 aa13.97□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Mex3bQ69Z36 601 aaKnown RBP13.97□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 LgalslbQ7TPX9 165 aa13.97□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 P01634 136 aa13.97□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Saxo2Q8BQB6 394 aa13.97□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Q9DAS2 200 aa13.97□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Itgb1bp1O35671 200 aa13.97□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Dtx2Q8R3P2 619 aa13.97□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Tmem89Q9DA04 169 aa13.97□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Tmem171Q4KL18 322 aa13.97□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Klf11Q8K1S5 502 aa13.97□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 St6galnac6Q9JM95 333 aa13.97□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Fam117aQ7TNF9 451 aa13.96□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Pxt1Q8K459 51 aa13.96□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Cks1bP61025 79 aa13.96□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Tmem241Q3UME2 297 aa13.96□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Nhlrc3Q8CCH2 347 aa13.96□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Dkk2Q9QYZ8 259 aa13.96□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 MavsQ8VCF0 503 aa13.96□□□□□ -0.17
Ccdc88a-201ENSMUST00000040182 Il12rb1Q60837 738 aa13.96□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Ypel2Q65Z95 119 aa13.96□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Ypel1Q9ESC7 118 aa13.96□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 QrfpQ8CE23 124 aa13.96□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Tspan2Q922J6 221 aa13.96□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Ighv6-3A0A075B5T2 118 aa13.95□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Gm14548E9Q1Z6 680 aa13.95□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Olfr749E9Q438 313 aa13.95□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Wfdc18P62810 74 aa13.95□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Gm11232Q5SPI8 295 aa13.95□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Olfr1258Q8VGN6 311 aa13.95□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Stac2Q8R1B0 408 aa13.95□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Trav7n-4A0A075B620 113 aa13.95□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Tmem158Q6F5E0 286 aa13.95□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Q8CF25 301 aa13.95□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Q8VE95 218 aa13.95□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Olfr1199Q8VF94 310 aa13.95□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Vmn1r54Q9EPB8 315 aa13.95□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Nav3Q80TN7 2359 aa13.95□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 eef1akmt3D3YWP0 232 aa13.95□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Rnase2O35291 155 aa13.95□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 4930596D02RikQ3V0H9 216 aa13.95□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Gm867A0A1W2P7T4 151 aa13.95□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 P18525 117 aa13.95□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Lhfpl4Q5U4E0 247 aa13.95□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 CklfQ9DAS1 152 aa13.95□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Spata45Q9CVW4 97 aa13.94□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Ighv8-9A0A0G2JET1 119 aa13.94□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Olfr33Q8VGX7 318 aa13.94□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Pglyrp3A1A547 347 aa13.94□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Znf385cA2A5E6 429 aa13.94□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Gm4788E9Q8B5 879 aa13.94□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Rpl23P62830 140 aaKnown RBP13.94□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Tmem129Q8K304 362 aa13.94□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Mrpl51Q9CPY1 128 aa13.94□□□□□ -0.18
Ccdc88a-201ENSMUST00000040182 Gm9945Q8BNZ3 91 aa13.94□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 49.1 ms