RNA–Protein interactions for RNA: YOR159C

SME1, Transcript of Core Sm protein Sm E, yeastyeast

Gene SME1, Length 285 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SME1YOR159C MTC7P32633 139 aa4.34□□□□□ -1.71
SME1YOR159C SER1P33330 395 aaKnown RBP4.34□□□□□ -1.71
SME1YOR159C YEL025CP39991 1188 aa4.34□□□□□ -1.71
SME1YOR159C SPC105P53148 917 aa4.34□□□□□ -1.71
SME1YOR159C BUD17P53727 317 aa4.34□□□□□ -1.71
SME1YOR159C NGL1Q08213 363 aaKnown RBP4.34□□□□□ -1.71
SME1YOR159C RGT2Q12300 763 aa4.34□□□□□ -1.71
SME1YOR159C USO1P25386 1790 aa4.33□□□□□ -1.72
SME1YOR159C CPA2P03965 1118 aaKnown RBP4.33□□□□□ -1.72
SME1YOR159C HMG2P12684 1045 aa4.33□□□□□ -1.72
SME1YOR159C CNE1P27825 502 aa4.33□□□□□ -1.72
SME1YOR159C HXT4P32467 576 aa4.33□□□□□ -1.72
SME1YOR159C DHR2P36009 735 aaPredicted RBP4.33□□□□□ -1.72
SME1YOR159C SRP68P38687 599 aaKnown RBP4.33□□□□□ -1.72
SME1YOR159C PIH1P38768 344 aa4.33□□□□□ -1.72
SME1YOR159C YNL018CP53976 612 aa4.33□□□□□ -1.72
SME1YOR159C YPL216WQ08964 1102 aa4.33□□□□□ -1.72
SME1YOR159C TMA17Q12513 150 aa4.33□□□□□ -1.72
SME1YOR159C NUP159P40477 1460 aa4.32□□□□□ -1.72
SME1YOR159C RPL7AP05737 244 aaKnown RBP4.32□□□□□ -1.72
SME1YOR159C AQY1P0CD91 305 aa4.32□□□□□ -1.72
SME1YOR159C ATP12P22135 325 aa4.32□□□□□ -1.72
SME1YOR159C NIT2P47016 307 aa4.32□□□□□ -1.72
SME1YOR159C YDL183CP48569 320 aa4.32□□□□□ -1.72
SME1YOR159C RPS15Q01855 142 aaKnown RBP4.32□□□□□ -1.72
SME1YOR159C RPL7BQ12213 244 aaKnown RBP4.32□□□□□ -1.72
SME1YOR159C TUF1P02992 437 aaKnown RBP4.31□□□□□ -1.72
SME1YOR159C COX11P19516 300 aaKnown RBP4.31□□□□□ -1.72
SME1YOR159C YBR071WP38243 211 aa4.31□□□□□ -1.72
SME1YOR159C ATG36P46983 293 aa4.31□□□□□ -1.72
SME1YOR159C SLD3P53135 668 aa4.31□□□□□ -1.72
SME1YOR159C COQ6P53318 479 aa4.31□□□□□ -1.72
SME1YOR159C STP1Q00947 519 aa4.31□□□□□ -1.72
SME1YOR159C YDL073WQ07454 984 aa4.31□□□□□ -1.72
SME1YOR159C HEM1P09950 548 aaPredicted RBP4.3□□□□□ -1.72
SME1YOR159C YEL076C-AP0CX16 216 aa4.3□□□□□ -1.72
SME1YOR159C YLR464WP0CX17 216 aa4.3□□□□□ -1.72
SME1YOR159C KAR1P11927 433 aa4.3□□□□□ -1.72
SME1YOR159C CAP1P28495 268 aaKnown RBP4.3□□□□□ -1.72
SME1YOR159C YEL076CP39971 216 aa4.3□□□□□ -1.72
SME1YOR159C EMP65P40085 556 aa4.3□□□□□ -1.72
SME1YOR159C ULP2P40537 1034 aaPredicted RBP4.3□□□□□ -1.72
SME1YOR159C YJR120WP47157 116 aa4.3□□□□□ -1.72
SME1YOR159C MDR1P53258 950 aa4.3□□□□□ -1.72
SME1YOR159C ATP23P53722 227 aa4.3□□□□□ -1.72
SME1YOR159C PDR10P51533 1564 aa4.3□□□□□ -1.72
SME1YOR159C TRM732Q03496 1420 aa4.29□□□□□ -1.72
SME1YOR159C SEC12P11655 471 aa4.29□□□□□ -1.72
SME1YOR159C RMA1P36001 430 aaKnown RBP4.29□□□□□ -1.72
SME1YOR159C YJL043WP47053 257 aa4.29□□□□□ -1.72
SME1YOR159C CWC2Q12046 339 aaPredicted RBP4.29□□□□□ -1.72
SME1YOR159C VPS5Q92331 675 aa4.29□□□□□ -1.72
SME1YOR159C ARO1P08566 1588 aaKnown RBP4.28□□□□□ -1.72
SME1YOR159C TY1B-DR3Q99231 1755 aa4.28□□□□□ -1.72
SME1YOR159C HOP1P20050 605 aa4.28□□□□□ -1.72
SME1YOR159C LOT5P34234 306 aa4.28□□□□□ -1.72
SME1YOR159C YJL193WP39542 402 aa4.28□□□□□ -1.72
SME1YOR159C LRO1P40345 661 aa4.28□□□□□ -1.72
SME1YOR159C YFL015CP43578 164 aa4.28□□□□□ -1.72
SME1YOR159C PEF1P53238 335 aa4.28□□□□□ -1.72
SME1YOR159C HOL1P53389 586 aa4.28□□□□□ -1.72
SME1YOR159C ARR3Q06598 404 aa4.28□□□□□ -1.72
SME1YOR159C PEX15Q08215 383 aa4.28□□□□□ -1.72
SME1YOR159C TGS1Q12052 315 aa4.28□□□□□ -1.72
SME1YOR159C TY1B-JR2P47100 1755 aaKnown RBP4.27□□□□□ -1.73
SME1YOR159C TY1B-ER2Q03619 1755 aa4.27□□□□□ -1.73
SME1YOR159C TY1B-MR1Q04214 1755 aa4.27□□□□□ -1.73
SME1YOR159C TY1B-MR2Q04670 1755 aaKnown RBP4.27□□□□□ -1.73
SME1YOR159C TY1B-LR1Q12088 1755 aaKnown RBP4.27□□□□□ -1.73
SME1YOR159C TY1B-NL1Q12112 1755 aa4.27□□□□□ -1.73
SME1YOR159C TY1B-GR1Q12141 1755 aa4.27□□□□□ -1.73
SME1YOR159C TY1B-BLQ12490 1755 aa4.27□□□□□ -1.73
SME1YOR159C PCK1P10963 549 aa4.27□□□□□ -1.73
SME1YOR159C WHI2P12611 486 aa4.27□□□□□ -1.73
SME1YOR159C VPS33P20795 691 aa4.27□□□□□ -1.73
SME1YOR159C RNR3P21672 869 aaKnown RBP4.27□□□□□ -1.73
SME1YOR159C BEM3P32873 1128 aa4.27□□□□□ -1.73
SME1YOR159C PSA1P41940 361 aaKnown RBP4.27□□□□□ -1.73
SME1YOR159C IRC5P43610 853 aa4.27□□□□□ -1.73
SME1YOR159C SAP4P53036 818 aa4.27□□□□□ -1.73
SME1YOR159C PEX14P53112 341 aa4.27□□□□□ -1.73
SME1YOR159C COG6P53959 839 aa4.27□□□□□ -1.73
SME1YOR159C MPS1P54199 764 aa4.27□□□□□ -1.73
SME1YOR159C ECM38Q05902 660 aaPredicted RBP4.27□□□□□ -1.73
SME1YOR159C ORM2Q06144 216 aa4.27□□□□□ -1.73
SME1YOR159C GEP3Q08622 556 aa4.27□□□□□ -1.73
SME1YOR159C CIR2Q08822 631 aa4.27□□□□□ -1.73
SME1YOR159C MRN1Q08925 612 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
SME1YOR159C PRS5Q12265 496 aaKnown RBP4.27□□□□□ -1.73
SME1YOR159C SSB1P11484 613 aaKnown RBP4.26□□□□□ -1.73
SME1YOR159C CWH43P25618 953 aa4.26□□□□□ -1.73
SME1YOR159C ECM32P32644 1121 aaKnown RBP4.26□□□□□ -1.73
SME1YOR159C TFC4P33339 1025 aa4.26□□□□□ -1.73
SME1YOR159C YPT10P38146 199 aa4.26□□□□□ -1.73
SME1YOR159C EXO1P39875 702 aa4.26□□□□□ -1.73
SME1YOR159C EAF5P39995 279 aa4.26□□□□□ -1.73
SME1YOR159C SSB2P40150 613 aaKnown RBP4.26□□□□□ -1.73
SME1YOR159C MTD1Q02046 320 aaKnown RBP4.26□□□□□ -1.73
SME1YOR159C GFD1Q04839 188 aaKnown RBP4.26□□□□□ -1.73
SME1YOR159C YOR378WQ08902 515 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 88.6 ms