RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeastyeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE4YOR035C ACS1Q01574 713 aa3.43□□□□□ -1.86
SHE4YOR035C IOC4Q04213 475 aa3.43□□□□□ -1.86
SHE4YOR035C ARG7Q04728 441 aa3.43□□□□□ -1.86
SHE4YOR035C GFD1Q04839 188 aaKnown RBP3.43□□□□□ -1.86
SHE4YOR035C YOL057WQ08225 711 aa3.43□□□□□ -1.86
SHE4YOR035C RNR3P21672 869 aaKnown RBP3.42□□□□□ -1.86
SHE4YOR035C AAD3P25612 363 aa3.42□□□□□ -1.86
SHE4YOR035C VFA1P40080 203 aa3.42□□□□□ -1.86
SHE4YOR035C PUS4P48567 403 aaKnown RBP3.42□□□□□ -1.86
SHE4YOR035C IMO32P53219 342 aa3.42□□□□□ -1.86
SHE4YOR035C USA1Q03714 838 aa3.42□□□□□ -1.86
SHE4YOR035C MLC2Q06580 163 aa3.42□□□□□ -1.86
SHE4YOR035C YOL114CQ12322 202 aa3.42□□□□□ -1.86
SHE4YOR035C RPL7AP05737 244 aaKnown RBP3.41□□□□□ -1.86
SHE4YOR035C CTT1P06115 562 aa3.41□□□□□ -1.86
SHE4YOR035C VPS34P22543 875 aa3.41□□□□□ -1.86
SHE4YOR035C RPS7AP26786 190 aaKnown RBP3.41□□□□□ -1.86
SHE4YOR035C YLF2P38746 405 aa3.41□□□□□ -1.86
SHE4YOR035C TRS31Q03337 283 aa3.41□□□□□ -1.86
SHE4YOR035C ENT2Q05785 613 aa3.41□□□□□ -1.86
SHE4YOR035C RPL7BQ12213 244 aaKnown RBP3.41□□□□□ -1.86
SHE4YOR035C GAL1P04385 528 aa3.41□□□□□ -1.86
SHE4YOR035C HEM1P09950 548 aaPredicted RBP3.41□□□□□ -1.86
SHE4YOR035C MRPL9P31334 269 aa3.41□□□□□ -1.86
SHE4YOR035C MAD3P47074 515 aa3.41□□□□□ -1.86
SHE4YOR035C YJR008WP47085 338 aa3.41□□□□□ -1.86
SHE4YOR035C COS12P53053 380 aa3.41□□□□□ -1.86
SHE4YOR035C ATP4P05626 244 aa3.4□□□□□ -1.86
SHE4YOR035C PMA2P19657 947 aa3.4□□□□□ -1.86
SHE4YOR035C PTP2P29461 750 aa3.4□□□□□ -1.86
SHE4YOR035C PIP2P52960 996 aa3.4□□□□□ -1.86
SHE4YOR035C HIM1Q06674 414 aa3.4□□□□□ -1.86
SHE4YOR035C LEU2P04173 364 aaPredicted RBP3.4□□□□□ -1.87
SHE4YOR035C HOM2P13663 365 aaKnown RBP3.4□□□□□ -1.87
SHE4YOR035C YPT10P38146 199 aa3.4□□□□□ -1.87
SHE4YOR035C SDH8P38345 138 aa3.4□□□□□ -1.87
SHE4YOR035C LNP1P38878 278 aa3.4□□□□□ -1.87
SHE4YOR035C HIS6P40545 261 aa3.4□□□□□ -1.87
SHE4YOR035C YFL015CP43578 164 aa3.4□□□□□ -1.87
SHE4YOR035C TAX4P47030 604 aa3.4□□□□□ -1.87
SHE4YOR035C YJL043WP47053 257 aa3.4□□□□□ -1.87
SHE4YOR035C TEP1P53916 434 aa3.4□□□□□ -1.87
SHE4YOR035C WAR1Q03631 944 aa3.4□□□□□ -1.87
SHE4YOR035C CRT10Q08226 957 aa3.4□□□□□ -1.87
SHE4YOR035C NDJ1Q12366 352 aa3.4□□□□□ -1.87
SHE4YOR035C PRE2P30656 287 aaKnown RBP3.39□□□□□ -1.87
SHE4YOR035C CDC5P32562 705 aa3.39□□□□□ -1.87
SHE4YOR035C CRD1Q07560 283 aa3.39□□□□□ -1.87
SHE4YOR035C AAD4Q07747 329 aa3.39□□□□□ -1.87
SHE4YOR035C OSW1Q08692 278 aa3.39□□□□□ -1.87
SHE4YOR035C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
SHE4YOR035C SEC3P33332 1336 aaKnown RBP3.39□□□□□ -1.87
SHE4YOR035C AAC1P04710 309 aa3.39□□□□□ -1.87
SHE4YOR035C ORC2P32833 620 aa3.39□□□□□ -1.87
SHE4YOR035C MTG2P38860 518 aa3.39□□□□□ -1.87
SHE4YOR035C VPS64Q03944 604 aa3.39□□□□□ -1.87
SHE4YOR035C YMR084WA2P2R3 262 aa3.38□□□□□ -1.87
SHE4YOR035C ERG11P10614 530 aa3.38□□□□□ -1.87
SHE4YOR035C RPC34P32910 317 aa3.38□□□□□ -1.87
SHE4YOR035C APM3P38153 483 aa3.38□□□□□ -1.87
SHE4YOR035C QRI7P43122 407 aa3.38□□□□□ -1.87
SHE4YOR035C POL31P46957 487 aa3.38□□□□□ -1.87
SHE4YOR035C MRI1Q06489 411 aaKnown RBP3.38□□□□□ -1.87
SHE4YOR035C PCL8Q08966 492 aa3.38□□□□□ -1.87
SHE4YOR035C AI5_ALPHAQ9ZZX1 630 aa3.38□□□□□ -1.87
SHE4YOR035C NOP2P40991 618 aaKnown RBP3.38□□□□□ -1.87
SHE4YOR035C THI7Q05998 598 aa3.38□□□□□ -1.87
SHE4YOR035C AHA1Q12449 350 aaKnown RBP3.38□□□□□ -1.87
SHE4YOR035C AQY1P0CD91 305 aa3.37□□□□□ -1.87
SHE4YOR035C MSH1P25846 959 aa3.37□□□□□ -1.87
SHE4YOR035C PRP45P28004 379 aaPredicted RBP3.37□□□□□ -1.87
SHE4YOR035C HOT13P36078 116 aa3.37□□□□□ -1.87
SHE4YOR035C VPS27P40343 622 aaKnown RBP3.37□□□□□ -1.87
SHE4YOR035C OPT1P40897 799 aa3.37□□□□□ -1.87
SHE4YOR035C CRF1Q04930 467 aa3.37□□□□□ -1.87
SHE4YOR035C YNL162W-AQ3E7A8 72 aa3.37□□□□□ -1.87
SHE4YOR035C YCR061WP25639 631 aa3.37□□□□□ -1.87
SHE4YOR035C GDA1P32621 518 aa3.37□□□□□ -1.87
SHE4YOR035C STT3P39007 718 aaKnown RBP3.37□□□□□ -1.87
SHE4YOR035C YNL092WP53934 400 aa3.37□□□□□ -1.87
SHE4YOR035C YML122CQ03207 126 aa3.37□□□□□ -1.87
SHE4YOR035C COQ11Q05892 277 aa3.37□□□□□ -1.87
SHE4YOR035C BRE1Q07457 700 aaKnown RBP3.37□□□□□ -1.87
SHE4YOR035C RRP6Q12149 733 aaKnown RBP3.37□□□□□ -1.87
SHE4YOR035C YER175W-AQ8TGU4 54 aa3.37□□□□□ -1.87
SHE4YOR035C PHO81P17442 1178 aa3.36□□□□□ -1.87
SHE4YOR035C RRP8P38961 392 aaKnown RBP3.36□□□□□ -1.87
SHE4YOR035C ARB1P40024 610 aaKnown RBP3.36□□□□□ -1.87
SHE4YOR035C CAB2P40506 365 aa3.36□□□□□ -1.87
SHE4YOR035C MOT3P54785 490 aaKnown RBP3.36□□□□□ -1.87
SHE4YOR035C YML119WQ03208 357 aa3.36□□□□□ -1.87
SHE4YOR035C MSS18P08593 268 aa3.36□□□□□ -1.87
SHE4YOR035C NUP1P20676 1076 aa3.36□□□□□ -1.87
SHE4YOR035C SIR1P21691 654 aa3.36□□□□□ -1.87
SHE4YOR035C ARO9P38840 513 aaPredicted RBP3.36□□□□□ -1.87
SHE4YOR035C MAM1P40065 302 aa3.36□□□□□ -1.87
SHE4YOR035C COG2P53271 262 aa3.36□□□□□ -1.87
SHE4YOR035C ESF2P53743 316 aaKnown RBP3.36□□□□□ -1.87
SHE4YOR035C AAT1Q01802 451 aa3.36□□□□□ -1.87
SHE4YOR035C UBP16Q02863 499 aa3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 80.8 ms