RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeastyeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP1YDR007W TRM8Q12009 286 aa6.49□□□□□ -1.37
TRP1YDR007W ENT1Q12518 454 aa6.49□□□□□ -1.37
TRP1YDR007W NUP170P38181 1502 aa6.49□□□□□ -1.37
TRP1YDR007W BET2P20133 325 aa6.48□□□□□ -1.37
TRP1YDR007W VPS33P20795 691 aa6.48□□□□□ -1.37
TRP1YDR007W PRE10P21242 288 aaKnown RBP RIP-Chip data6.48□□□□□ -1.37not detected
TRP1YDR007W STE11P23561 717 aa6.48□□□□□ -1.37
TRP1YDR007W MAC1P35192 417 aa6.48□□□□□ -1.37
TRP1YDR007W FSH1P38777 243 aaKnown RBP6.48□□□□□ -1.37
TRP1YDR007W YEL025CP39991 1188 aa6.48□□□□□ -1.37
TRP1YDR007W NDE1P40215 560 aa6.48□□□□□ -1.37
TRP1YDR007W AIM21P40563 679 aa6.48□□□□□ -1.37
TRP1YDR007W MNN10P50108 393 aaKnown RBP6.48□□□□□ -1.37
TRP1YDR007W MCM6P53091 1017 aaKnown RBP6.48□□□□□ -1.37
TRP1YDR007W CBK1P53894 756 aa6.48□□□□□ -1.37
TRP1YDR007W TRS31Q03337 283 aa6.48□□□□□ -1.37
TRP1YDR007W CDA2Q06703 312 aa6.48□□□□□ -1.37
TRP1YDR007W CHS5Q12114 671 aaKnown RBP6.48□□□□□ -1.37
TRP1YDR007W MED1Q12321 566 aa6.48□□□□□ -1.37
TRP1YDR007W ZRT2Q12436 422 aa6.48□□□□□ -1.37
TRP1YDR007W YLR419WQ06698 1435 aaKnown RBP6.48□□□□□ -1.37
TRP1YDR007W SMC4Q12267 1418 aa6.48□□□□□ -1.37
TRP1YDR007W GUK1P15454 187 aaKnown RBP6.47□□□□□ -1.37
TRP1YDR007W YCR015CP25616 317 aa6.47□□□□□ -1.37
TRP1YDR007W ARP2P32381 391 aaKnown RBP6.47□□□□□ -1.37
TRP1YDR007W HIS7P33734 552 aaKnown RBP6.47□□□□□ -1.37
TRP1YDR007W SET3P36124 751 aa6.47□□□□□ -1.37
TRP1YDR007W REV7P38927 245 aa6.47□□□□□ -1.37
TRP1YDR007W YJL193WP39542 402 aa6.47□□□□□ -1.37
TRP1YDR007W YER010CP40011 234 aa6.47□□□□□ -1.37
TRP1YDR007W UBC11P52492 156 aa6.47□□□□□ -1.37
TRP1YDR007W PRP43P53131 767 aaKnown RBP6.47□□□□□ -1.37
TRP1YDR007W ADY4Q05955 493 aa6.47□□□□□ -1.37
TRP1YDR007W TFC6Q06339 672 aa6.47□□□□□ -1.37
TRP1YDR007W YLR358CO13565 187 aa6.46□□□□□ -1.38
TRP1YDR007W ROX1P25042 368 aa6.46□□□□□ -1.38
TRP1YDR007W RPS7AP26786 190 aaKnown RBP6.46□□□□□ -1.38
TRP1YDR007W NTH1P32356 751 aa6.46□□□□□ -1.38
TRP1YDR007W TEF4P36008 412 aaKnown RBP6.46□□□□□ -1.38
TRP1YDR007W MUD2P36084 527 aaKnown RBP6.46□□□□□ -1.38
TRP1YDR007W STB5P38699 743 aa6.46□□□□□ -1.38
TRP1YDR007W BCD1P38772 366 aa6.46□□□□□ -1.38
TRP1YDR007W LRO1P40345 661 aa6.46□□□□□ -1.38
TRP1YDR007W SMC3P47037 1230 aa6.46□□□□□ -1.38
TRP1YDR007W TEL2P53038 688 aa6.46□□□□□ -1.38
TRP1YDR007W RRT6P53117 311 aaPredicted RBP6.46□□□□□ -1.38
TRP1YDR007W MMS1Q06211 1407 aa6.46□□□□□ -1.38
TRP1YDR007W ICL2Q12031 575 aa6.46□□□□□ -1.38
TRP1YDR007W CFT1Q06632 1357 aaKnown RBP6.45□□□□□ -1.38
TRP1YDR007W BIK1P11709 440 aa6.45□□□□□ -1.38
TRP1YDR007W SAN1P22470 610 aa6.45□□□□□ -1.38
TRP1YDR007W CNS1P33313 385 aa6.45□□□□□ -1.38
TRP1YDR007W DPH1P40487 425 aaKnown RBP6.45□□□□□ -1.38
TRP1YDR007W BST1P43571 1029 aa6.45□□□□□ -1.38
TRP1YDR007W YGR054WP53235 642 aaKnown RBP6.45□□□□□ -1.38
TRP1YDR007W ARR3Q06598 404 aa6.45□□□□□ -1.38
TRP1YDR007W IRC13Q08630 104 aa6.45□□□□□ -1.38
TRP1YDR007W PDR10P51533 1564 aa6.44□□□□□ -1.38
TRP1YDR007W PRP6P19735 899 aaPredicted RBP6.44□□□□□ -1.38
TRP1YDR007W PRP45P28004 379 aaPredicted RBP6.44□□□□□ -1.38
TRP1YDR007W HRB1P38922 454 aaKnown RBP RIP-Chip data6.44□□□□□ -1.38not detected
TRP1YDR007W YEL068CP39977 110 aa6.44□□□□□ -1.38
TRP1YDR007W NOP16P40007 231 aaKnown RBP6.44□□□□□ -1.38
TRP1YDR007W YIR014WP40570 242 aa6.44□□□□□ -1.38
TRP1YDR007W MPS3P47069 682 aa6.44□□□□□ -1.38
TRP1YDR007W PAN2P53010 1115 aaPredicted RBP6.44□□□□□ -1.38
TRP1YDR007W COX17Q12287 69 aa6.44□□□□□ -1.38
TRP1YDR007W YKL033W-AQ86ZR7 236 aa6.44□□□□□ -1.38
TRP1YDR007W SCC2Q04002 1493 aa6.44□□□□□ -1.38
TRP1YDR007W IRC20Q06554 1556 aa6.44□□□□□ -1.38
TRP1YDR007W RPO31P04051 1460 aa6.43□□□□□ -1.38
TRP1YDR007W TPK1P06244 397 aa6.43□□□□□ -1.38
TRP1YDR007W FUM1P08417 488 aaKnown RBP6.43□□□□□ -1.38
TRP1YDR007W MSS1P32559 526 aaPredicted RBP6.43□□□□□ -1.38
TRP1YDR007W DSS4P32601 143 aa6.43□□□□□ -1.38
TRP1YDR007W VPS8P39702 1274 aa6.43□□□□□ -1.38
TRP1YDR007W IDS2P46958 469 aa6.43□□□□□ -1.38
TRP1YDR007W YJL163CP46996 555 aa6.43□□□□□ -1.38
TRP1YDR007W SRB7P47822 140 aa6.43□□□□□ -1.38
TRP1YDR007W AIM6Q07716 390 aa6.43□□□□□ -1.38
TRP1YDR007W STU1P38198 1513 aa6.43□□□□□ -1.38
TRP1YDR007W MYO4P32492 1471 aa6.42□□□□□ -1.38
TRP1YDR007W ERG4P25340 473 aa6.42□□□□□ -1.38
TRP1YDR007W PRE2P30656 287 aaKnown RBP6.42□□□□□ -1.38
TRP1YDR007W PAH1P32567 862 aa6.42□□□□□ -1.38
TRP1YDR007W DHR2P36009 735 aaPredicted RBP6.42□□□□□ -1.38
TRP1YDR007W KHA1P40309 873 aa6.42□□□□□ -1.38
TRP1YDR007W ESL1P40456 1118 aa6.42□□□□□ -1.38
TRP1YDR007W BUL1P48524 976 aa6.42□□□□□ -1.38
TRP1YDR007W PSP1P50896 841 aaKnown RBP6.42□□□□□ -1.38
TRP1YDR007W COS12P53053 380 aa6.42□□□□□ -1.38
TRP1YDR007W PIL1P53252 339 aaKnown RBP6.42□□□□□ -1.38
TRP1YDR007W YPL108WQ02872 168 aaPredicted RBP6.42□□□□□ -1.38
TRP1YDR007W GIR2Q03768 265 aaPredicted RBP6.42□□□□□ -1.38
TRP1YDR007W SNO4Q04902 237 aa6.42□□□□□ -1.38
TRP1YDR007W IZH3Q07959 543 aa6.42□□□□□ -1.38
TRP1YDR007W FRE5Q08908 694 aa6.42□□□□□ -1.38
TRP1YDR007W HSP33Q08914 237 aaKnown RBP6.42□□□□□ -1.38
TRP1YDR007W HSP32Q08992 237 aa6.42□□□□□ -1.38
TRP1YDR007W CDC31P06704 161 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms