RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W YDL073WQ07454 984 aa3.46□□□□□ -1.86
SHS1YDL225W RPN13O13563 156 aa3.45□□□□□ -1.86
SHS1YDL225W POL3P15436 1097 aa3.45□□□□□ -1.86
SHS1YDL225W MCM3P24279 971 aaKnown RBP3.45□□□□□ -1.86
SHS1YDL225W PRP45P28004 379 aaPredicted RBP3.45□□□□□ -1.86
SHS1YDL225W MUP3P38734 546 aa3.45□□□□□ -1.86
SHS1YDL225W ACA1P39970 489 aa3.45□□□□□ -1.86
SHS1YDL225W YEL020CP39994 560 aa3.45□□□□□ -1.86
SHS1YDL225W RPT2P40327 437 aaKnown RBP3.45□□□□□ -1.86
SHS1YDL225W YIL166CP40445 542 aa3.45□□□□□ -1.86
SHS1YDL225W IDS2P46958 469 aa3.45□□□□□ -1.86
SHS1YDL225W YPK1P12688 680 aaKnown RBP3.44□□□□□ -1.86
SHS1YDL225W PHO81P17442 1178 aa3.44□□□□□ -1.86
SHS1YDL225W SIR1P21691 654 aa3.44□□□□□ -1.86
SHS1YDL225W VPS34P22543 875 aa3.44□□□□□ -1.86
SHS1YDL225W RPS7AP26786 190 aaKnown RBP3.44□□□□□ -1.86
SHS1YDL225W LOT5P34234 306 aa3.44□□□□□ -1.86
SHS1YDL225W SPC72P39723 622 aa3.44□□□□□ -1.86
SHS1YDL225W YGL117WP53133 265 aa3.44□□□□□ -1.86
SHS1YDL225W VPS64Q03944 604 aa3.44□□□□□ -1.86
SHS1YDL225W ZPS1Q12512 249 aa3.44□□□□□ -1.86
SHS1YDL225W CPA2P03965 1118 aaKnown RBP3.43□□□□□ -1.86
SHS1YDL225W TPK2P06245 380 aa3.43□□□□□ -1.86
SHS1YDL225W RPA135P22138 1203 aaKnown RBP3.43□□□□□ -1.86
SHS1YDL225W PWP2P25635 923 aaKnown RBP3.43□□□□□ -1.86
SHS1YDL225W SAP4P53036 818 aa3.43□□□□□ -1.86
SHS1YDL225W COQ6P53318 479 aa3.43□□□□□ -1.86
SHS1YDL225W APM1Q00776 475 aaPredicted RBP3.43□□□□□ -1.86
SHS1YDL225W ATG16Q03818 150 aa3.43□□□□□ -1.86
SHS1YDL225W GIS1Q03833 894 aa3.43□□□□□ -1.86
SHS1YDL225W EIS1Q05050 843 aaKnown RBP3.43□□□□□ -1.86
SHS1YDL225W IWR1Q07532 353 aaPredicted RBP3.43□□□□□ -1.86
SHS1YDL225W MIS1P09440 975 aaKnown RBP3.43□□□□□ -1.86
SHS1YDL225W WHI2P12611 486 aa3.43□□□□□ -1.86
SHS1YDL225W RNR3P21672 869 aaKnown RBP3.43□□□□□ -1.86
SHS1YDL225W SPO11P23179 398 aa3.43□□□□□ -1.86
SHS1YDL225W DBF20P32328 564 aa3.43□□□□□ -1.86
SHS1YDL225W YMC1P32331 307 aa3.43□□□□□ -1.86
SHS1YDL225W CDC5P32562 705 aa3.43□□□□□ -1.86
SHS1YDL225W FRD1P32614 470 aaKnown RBP3.43□□□□□ -1.86
SHS1YDL225W UGP1P32861 499 aaKnown RBP3.43□□□□□ -1.86
SHS1YDL225W VPS24P36095 224 aaKnown RBP3.43□□□□□ -1.86
SHS1YDL225W SDH8P38345 138 aa3.43□□□□□ -1.86
SHS1YDL225W ARB1P40024 610 aaKnown RBP3.43□□□□□ -1.86
SHS1YDL225W IES5P40060 125 aa3.43□□□□□ -1.86
SHS1YDL225W CPR6P53691 371 aaKnown RBP3.43□□□□□ -1.86
SHS1YDL225W CPR8P53728 308 aa3.43□□□□□ -1.86
SHS1YDL225W AIM6Q07716 390 aa3.43□□□□□ -1.86
SHS1YDL225W ICL2Q12031 575 aa3.43□□□□□ -1.86
SHS1YDL225W AAC1P04710 309 aa3.42□□□□□ -1.86
SHS1YDL225W ADE3P07245 946 aaKnown RBP3.42□□□□□ -1.86
SHS1YDL225W MSM1P22438 575 aa3.42□□□□□ -1.86
SHS1YDL225W SAT4P25333 603 aaKnown RBP3.42□□□□□ -1.86
SHS1YDL225W PPZ2P33329 710 aa3.42□□□□□ -1.86
SHS1YDL225W PTH2P34222 208 aa3.42□□□□□ -1.86
SHS1YDL225W PAC2P39937 518 aa3.42□□□□□ -1.86
SHS1YDL225W CAB2P40506 365 aa3.42□□□□□ -1.86
SHS1YDL225W VMS1Q04311 632 aaKnown RBP3.42□□□□□ -1.86
SHS1YDL225W ARG7Q04728 441 aa3.42□□□□□ -1.86
SHS1YDL225W GFD1Q04839 188 aaKnown RBP3.42□□□□□ -1.86
SHS1YDL225W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
SHS1YDL225W ADE5,7P07244 802 aaKnown RBP3.41□□□□□ -1.86
SHS1YDL225W RIT1P23796 513 aa3.41□□□□□ -1.86
SHS1YDL225W SWI4P25302 1093 aaKnown RBP3.41□□□□□ -1.86
SHS1YDL225W AAD3P25612 363 aa3.41□□□□□ -1.86
SHS1YDL225W ADY2P25613 283 aa3.41□□□□□ -1.86
SHS1YDL225W MRPL9P31334 269 aa3.41□□□□□ -1.86
SHS1YDL225W FUI1P38196 639 aa3.41□□□□□ -1.86
SHS1YDL225W PUG1P40100 303 aa3.41□□□□□ -1.86
SHS1YDL225W MRK1P50873 501 aa3.41□□□□□ -1.86
SHS1YDL225W CIA1Q05583 330 aa3.41□□□□□ -1.86
SHS1YDL225W PMA2P19657 947 aa3.4□□□□□ -1.86
SHS1YDL225W CLB4P24871 460 aa3.4□□□□□ -1.86
SHS1YDL225W YCR061WP25639 631 aa3.4□□□□□ -1.86
SHS1YDL225W YGR021WP53212 290 aa3.4□□□□□ -1.86
SHS1YDL225W ATG21Q02887 496 aa3.4□□□□□ -1.86
SHS1YDL225W ARA2Q04212 335 aa3.4□□□□□ -1.86
SHS1YDL225W CRF1Q04930 467 aa3.4□□□□□ -1.86
SHS1YDL225W ULA1Q12059 462 aa3.4□□□□□ -1.86
SHS1YDL225W LNP1P38878 278 aa3.39□□□□□ -1.87
SHS1YDL225W RIX1P38883 763 aaPredicted RBP3.39□□□□□ -1.87
SHS1YDL225W ERR3P42222 437 aa3.39□□□□□ -1.87
SHS1YDL225W ESF2P53743 316 aaKnown RBP3.39□□□□□ -1.87
SHS1YDL225W WAR1Q03631 944 aa3.39□□□□□ -1.87
SHS1YDL225W LEU2P04173 364 aaPredicted RBP3.39□□□□□ -1.87
SHS1YDL225W NCP1P16603 691 aaKnown RBP3.39□□□□□ -1.87
SHS1YDL225W TRX2P22803 104 aaKnown RBP3.39□□□□□ -1.87
SHS1YDL225W ILV6P25605 309 aaKnown RBP3.39□□□□□ -1.87
SHS1YDL225W MRS6P32864 603 aaKnown RBP3.39□□□□□ -1.87
SHS1YDL225W ARO9P38840 513 aaPredicted RBP3.39□□□□□ -1.87
SHS1YDL225W MTG2P38860 518 aa3.39□□□□□ -1.87
SHS1YDL225W FAF1P40546 346 aaPredicted RBP3.39□□□□□ -1.87
SHS1YDL225W YFL015CP43578 164 aa3.39□□□□□ -1.87
SHS1YDL225W YNL092WP53934 400 aa3.39□□□□□ -1.87
SHS1YDL225W UBP16Q02863 499 aa3.39□□□□□ -1.87
SHS1YDL225W YPL108WQ02872 168 aaPredicted RBP3.39□□□□□ -1.87
SHS1YDL225W YML119WQ03208 357 aa3.39□□□□□ -1.87
SHS1YDL225W BLS1Q06071 122 aa3.39□□□□□ -1.87
SHS1YDL225W ARO10Q06408 635 aa3.39□□□□□ -1.87
SHS1YDL225W CRT10Q08226 957 aa3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms