RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	BUL1	P48524	976 aa		6.13	□□□□□ -1.43
RPN5	YDL147W	MDM1	Q01846	1127 aa		6.13	□□□□□ -1.43
RPN5	YDL147W	CLU1	Q03690	1277 aa	Known RBP	6.13	□□□□□ -1.43
RPN5	YDL147W	IZH3	Q07959	543 aa		6.13	□□□□□ -1.43
RPN5	YDL147W	TPK1	P06244	397 aa		6.12	□□□□□ -1.43
RPN5	YDL147W	SIR3	P06701	978 aa		6.12	□□□□□ -1.43
RPN5	YDL147W	BIK1	P11709	440 aa		6.12	□□□□□ -1.43
RPN5	YDL147W	FUB1	P25659	250 aa		6.12	□□□□□ -1.43
RPN5	YDL147W	PRP45	P28004	379 aa	Predicted RBP	6.12	□□□□□ -1.43
RPN5	YDL147W	CAP1	P28495	268 aa	Known RBP	6.12	□□□□□ -1.43
RPN5	YDL147W	THI80	P35202	319 aa		6.12	□□□□□ -1.43
RPN5	YDL147W	NUP120	P35729	1037 aa		6.12	□□□□□ -1.43
RPN5	YDL147W	SUL1	P38359	859 aa		6.12	□□□□□ -1.43
RPN5	YDL147W	YER010C	P40011	234 aa		6.12	□□□□□ -1.43
RPN5	YDL147W	SKP2	P42843	763 aa		6.12	□□□□□ -1.43
RPN5	YDL147W	BST1	P43571	1029 aa		6.12	□□□□□ -1.43
RPN5	YDL147W	COS12	P53053	380 aa		6.12	□□□□□ -1.43
RPN5	YDL147W	YSH1	Q06224	779 aa	Predicted RBP	6.12	□□□□□ -1.43
RPN5	YDL147W	YDL086W	Q07505	273 aa		6.12	□□□□□ -1.43
RPN5	YDL147W	AIM6	Q07716	390 aa		6.12	□□□□□ -1.43
RPN5	YDL147W	ICL2	Q12031	575 aa		6.12	□□□□□ -1.43
RPN5	YDL147W	TRM13	Q12383	476 aa		6.12	□□□□□ -1.43
RPN5	YDL147W	IMP2'	P32351	346 aa		6.11	□□□□□ -1.43
RPN5	YDL147W	MSS1	P32559	526 aa	Predicted RBP	6.11	□□□□□ -1.43
RPN5	YDL147W	SET3	P36124	751 aa		6.11	□□□□□ -1.43
RPN5	YDL147W	AXL2	P38928	823 aa		6.11	□□□□□ -1.43
RPN5	YDL147W	THI6	P41835	540 aa		6.11	□□□□□ -1.43
RPN5	YDL147W	AVT1	P47082	602 aa		6.11	□□□□□ -1.43
RPN5	YDL147W	PHO23	P50947	330 aa		6.11	□□□□□ -1.43
RPN5	YDL147W	FHN1	P53279	174 aa		6.11	□□□□□ -1.43
RPN5	YDL147W	HOF1	Q05080	669 aa		6.11	□□□□□ -1.43
RPN5	YDL147W	URN1	Q06525	465 aa	Known RBP	6.11	□□□□□ -1.43
RPN5	YDL147W	MLH3	Q12083	715 aa		6.11	□□□□□ -1.43
RPN5	YDL147W	COX17	Q12287	69 aa		6.11	□□□□□ -1.43
RPN5	YDL147W	PPR1	P07272	904 aa	Predicted RBP	6.1	□□□□□ -1.43
RPN5	YDL147W	PET122	P10355	254 aa		6.1	□□□□□ -1.43
RPN5	YDL147W	GUK1	P15454	187 aa	Known RBP	6.1	□□□□□ -1.43
RPN5	YDL147W	VPS34	P22543	875 aa		6.1	□□□□□ -1.43
RPN5	YDL147W	PRE2	P30656	287 aa	Known RBP	6.1	□□□□□ -1.43
RPN5	YDL147W	APL3	P38065	1025 aa		6.1	□□□□□ -1.43
RPN5	YDL147W	IRC24	P40580	263 aa		6.1	□□□□□ -1.43
RPN5	YDL147W	ESF2	P53743	316 aa	Known RBP	6.1	□□□□□ -1.43
RPN5	YDL147W	EFR3	Q03653	782 aa	Known RBP	6.1	□□□□□ -1.43
RPN5	YDL147W	MED1	Q12321	566 aa		6.1	□□□□□ -1.43
RPN5	YDL147W	FUM1	P08417	488 aa	Known RBP	6.09	□□□□□ -1.43
RPN5	YDL147W	THR1	P17423	357 aa	Known RBP	6.09	□□□□□ -1.43
RPN5	YDL147W	ELF1	P36053	145 aa		6.09	□□□□□ -1.43
RPN5	YDL147W	RIC1	P40395	1056 aa		6.09	□□□□□ -1.43
RPN5	YDL147W	YGR151C	P53287	111 aa		6.09	□□□□□ -1.43
RPN5	YDL147W	RIA1	P53893	1110 aa		6.09	□□□□□ -1.43
RPN5	YDL147W	SSL2	Q00578	843 aa		6.09	□□□□□ -1.43
RPN5	YDL147W	USV1	Q12132	391 aa		6.09	□□□□□ -1.43
RPN5	YDL147W	ELM1	P32801	640 aa		6.08	□□□□□ -1.44
RPN5	YDL147W	DEF1	P35732	738 aa	Known RBP	6.08	□□□□□ -1.44
RPN5	YDL147W	MUD2	P36084	527 aa	Known RBP	6.08	□□□□□ -1.44
RPN5	YDL147W	YEL068C	P39977	110 aa		6.08	□□□□□ -1.44
RPN5	YDL147W	NOP16	P40007	231 aa	Known RBP	6.08	□□□□□ -1.44
RPN5	YDL147W	NDE1	P40215	560 aa		6.08	□□□□□ -1.44
RPN5	YDL147W	ZAP1	P47043	880 aa		6.08	□□□□□ -1.44
RPN5	YDL147W	RRT6	P53117	311 aa	Predicted RBP	6.08	□□□□□ -1.44
RPN5	YDL147W	DIP5	P53388	608 aa		6.08	□□□□□ -1.44
RPN5	YDL147W	MFM1	Q02783	413 aa		6.08	□□□□□ -1.44
RPN5	YDL147W	YLR040C	Q07988	224 aa		6.08	□□□□□ -1.44
RPN5	YDL147W	NBP2	Q12163	236 aa		6.08	□□□□□ -1.44
RPN5	YDL147W	NTO1	Q12311	748 aa		6.08	□□□□□ -1.44
RPN5	YDL147W	SUL2	Q12325	893 aa		6.08	□□□□□ -1.44
RPN5	YDL147W	SAN1	P22470	610 aa		6.07	□□□□□ -1.44
RPN5	YDL147W	MPE1	P35728	441 aa	Known RBP	6.07	□□□□□ -1.44
RPN5	YDL147W	MRPL7	P36519	292 aa		6.07	□□□□□ -1.44
RPN5	YDL147W	YHR097C	P38809	366 aa	Known RBP	6.07	□□□□□ -1.44
RPN5	YDL147W	LNP1	P38878	278 aa		6.07	□□□□□ -1.44
RPN5	YDL147W	ARB1	P40024	610 aa	Known RBP	6.07	□□□□□ -1.44
RPN5	YDL147W	DPH1	P40487	425 aa	Known RBP	6.07	□□□□□ -1.44
RPN5	YDL147W	IST3	P40565	148 aa	Predicted RBP	6.07	□□□□□ -1.44
RPN5	YDL147W	SRB7	P47822	140 aa		6.07	□□□□□ -1.44
RPN5	YDL147W	ATG4	P53867	494 aa		6.07	□□□□□ -1.44
RPN5	YDL147W	DAK1	P54838	584 aa	Known RBP	6.07	□□□□□ -1.44
RPN5	YDL147W	SNO4	Q04902	237 aa		6.07	□□□□□ -1.44
RPN5	YDL147W	TFC6	Q06339	672 aa		6.07	□□□□□ -1.44
RPN5	YDL147W	HSP33	Q08914	237 aa	Known RBP	6.07	□□□□□ -1.44
RPN5	YDL147W	YPL216W	Q08964	1102 aa		6.07	□□□□□ -1.44
RPN5	YDL147W	HSP32	Q08992	237 aa		6.07	□□□□□ -1.44
RPN5	YDL147W	YLR302C	O13544	120 aa		6.06	□□□□□ -1.44
RPN5	YDL147W	PAH1	P32567	862 aa		6.06	□□□□□ -1.44
RPN5	YDL147W	PPS1	P38148	807 aa		6.06	□□□□□ -1.44
RPN5	YDL147W	CBR1	P38626	284 aa	Known RBP	6.06	□□□□□ -1.44
RPN5	YDL147W	PSP1	P50896	841 aa	Known RBP	6.06	□□□□□ -1.44
RPN5	YDL147W	COG1	P53079	417 aa		6.06	□□□□□ -1.44
RPN5	YDL147W	UFO1	Q04511	668 aa		6.06	□□□□□ -1.44
RPN5	YDL147W	ATP2	P00830	511 aa	Known RBP	6.05	□□□□□ -1.44
RPN5	YDL147W	ARG2	P40360	574 aa		6.05	□□□□□ -1.44
RPN5	YDL147W	CTR1	P49573	406 aa		6.05	□□□□□ -1.44
RPN5	YDL147W	NMA2	P53204	395 aa		6.05	□□□□□ -1.44
RPN5	YDL147W	CRF1	Q04930	467 aa		6.05	□□□□□ -1.44
RPN5	YDL147W	YOL073C	Q08232	322 aa		6.05	□□□□□ -1.44
RPN5	YDL147W	TGS1	Q12052	315 aa		6.05	□□□□□ -1.44
RPN5	YDL147W	SKM1	Q12469	655 aa		6.05	□□□□□ -1.44
RPN5	YDL147W	CTS1	P29029	562 aa		6.04	□□□□□ -1.44
RPN5	YDL147W	CBF2	P32504	956 aa		6.04	□□□□□ -1.44
RPN5	YDL147W	KSP1	P38691	1029 aa	Known RBP	6.04	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms