RNA–Protein interactions for RNA: YBL024W

NCL1, Transcript of S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase, yeast

Gene NCL1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCL1	YBL024W	TRS31	Q03337	283 aa		2.59	□□□□□ -2
NCL1	YBL024W	ENT2	Q05785	613 aa		2.59	□□□□□ -2
NCL1	YBL024W	COG4	Q06096	861 aa		2.59	□□□□□ -2
NCL1	YBL024W	NEW1	Q08972	1196 aa	Known RBP	2.59	□□□□□ -2
NCL1	YBL024W	ICL2	Q12031	575 aa		2.59	□□□□□ -2
NCL1	YBL024W	YKL033W-A	Q86ZR7	236 aa		2.59	□□□□□ -2
NCL1	YBL024W	SNF1	P06782	633 aa	Known RBP	2.58	□□□□□ -2
NCL1	YBL024W	RPS7A	P26786	190 aa	Known RBP	2.58	□□□□□ -2
NCL1	YBL024W	XRS2	P33301	854 aa		2.58	□□□□□ -2
NCL1	YBL024W	RRN3	P36070	627 aa		2.58	□□□□□ -2
NCL1	YBL024W	CUE2	P36075	443 aa	Known RBP	2.58	□□□□□ -2
NCL1	YBL024W	VFA1	P40080	203 aa		2.58	□□□□□ -2
NCL1	YBL024W	PSF2	P40359	213 aa		2.58	□□□□□ -2
NCL1	YBL024W	COS12	P53053	380 aa		2.58	□□□□□ -2
NCL1	YBL024W	IZH3	Q07959	543 aa		2.58	□□□□□ -2
NCL1	YBL024W	TRM8	Q12009	286 aa		2.58	□□□□□ -2
NCL1	YBL024W	CLF1	Q12309	687 aa	Predicted RBP	2.58	□□□□□ -2
NCL1	YBL024W	THR1	P17423	357 aa	Known RBP	2.57	□□□□□ -2
NCL1	YBL024W	PRP45	P28004	379 aa	Predicted RBP	2.57	□□□□□ -2
NCL1	YBL024W	PRE2	P30656	287 aa	Known RBP	2.57	□□□□□ -2
NCL1	YBL024W	PPZ2	P33329	710 aa		2.57	□□□□□ -2
NCL1	YBL024W	MRPL7	P36519	292 aa		2.57	□□□□□ -2
NCL1	YBL024W	CTP1	P38152	299 aa		2.57	□□□□□ -2
NCL1	YBL024W	YHR097C	P38809	366 aa	Known RBP	2.57	□□□□□ -2
NCL1	YBL024W	AXL2	P38928	823 aa		2.57	□□□□□ -2
NCL1	YBL024W	YJL193W	P39542	402 aa		2.57	□□□□□ -2
NCL1	YBL024W	YEL025C	P39991	1188 aa		2.57	□□□□□ -2
NCL1	YBL024W	ARG2	P40360	574 aa		2.57	□□□□□ -2
NCL1	YBL024W	NDC80	P40460	691 aa		2.57	□□□□□ -2
NCL1	YBL024W	MNT3	P40549	630 aa		2.57	□□□□□ -2
NCL1	YBL024W	YDR056C	Q12025	205 aa		2.57	□□□□□ -2
NCL1	YBL024W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	2.57	□□□□□ -2	not detected
NCL1	YBL024W	SEC12	P11655	471 aa		2.57	□□□□□ -2
NCL1	YBL024W	GUK1	P15454	187 aa	Known RBP	2.57	□□□□□ -2
NCL1	YBL024W	GFD2	P25370	566 aa	Known RBP	2.57	□□□□□ -2
NCL1	YBL024W	RER1	P25560	188 aa		2.57	□□□□□ -2
NCL1	YBL024W	CHS3	P29465	1165 aa		2.57	□□□□□ -2
NCL1	YBL024W	ARP2	P32381	391 aa	Known RBP	2.57	□□□□□ -2
NCL1	YBL024W	ELF1	P36053	145 aa		2.57	□□□□□ -2
NCL1	YBL024W	YJL206C	P39529	758 aa		2.57	□□□□□ -2
NCL1	YBL024W	YIL166C	P40445	542 aa		2.57	□□□□□ -2
NCL1	YBL024W	CAB2	P40506	365 aa		2.57	□□□□□ -2
NCL1	YBL024W	CTF18	P49956	741 aa		2.57	□□□□□ -2
NCL1	YBL024W	IMA1	P53051	589 aa		2.57	□□□□□ -2
NCL1	YBL024W	VPS73	P53142	486 aa	Known RBP	2.57	□□□□□ -2
NCL1	YBL024W	SMX3	P54999	86 aa	Predicted RBP	2.57	□□□□□ -2
NCL1	YBL024W	LGE1	Q02796	332 aa	Known RBP	2.57	□□□□□ -2
NCL1	YBL024W	HOF1	Q05080	669 aa		2.57	□□□□□ -2
NCL1	YBL024W	VID22	Q05934	901 aa		2.57	□□□□□ -2
NCL1	YBL024W	OPY2	Q06810	360 aa		2.57	□□□□□ -2
NCL1	YBL024W	USV1	Q12132	391 aa		2.57	□□□□□ -2
NCL1	YBL024W	RRI2	Q12348	645 aa		2.57	□□□□□ -2
NCL1	YBL024W	BET2	P20133	325 aa		2.56	□□□□□ -2
NCL1	YBL024W	FUB1	P25659	250 aa		2.56	□□□□□ -2
NCL1	YBL024W	NTH1	P32356	751 aa		2.56	□□□□□ -2
NCL1	YBL024W	DSS4	P32601	143 aa		2.56	□□□□□ -2
NCL1	YBL024W	SLC1	P33333	303 aa		2.56	□□□□□ -2
NCL1	YBL024W	RAD26	P40352	1085 aa		2.56	□□□□□ -2
NCL1	YBL024W	SNF12	P53628	566 aa		2.56	□□□□□ -2
NCL1	YBL024W	EFR3	Q03653	782 aa	Known RBP	2.56	□□□□□ -2
NCL1	YBL024W	VPS64	Q03944	604 aa		2.56	□□□□□ -2
NCL1	YBL024W	ARA2	Q04212	335 aa		2.56	□□□□□ -2
NCL1	YBL024W	CSR1	Q06705	408 aa	Known RBP	2.56	□□□□□ -2
NCL1	YBL024W	YDL086W	Q07505	273 aa		2.56	□□□□□ -2
NCL1	YBL024W	AIM6	Q07716	390 aa		2.56	□□□□□ -2
NCL1	YBL024W	PCD1	Q12524	340 aa		2.56	□□□□□ -2
NCL1	YBL024W	BIK1	P11709	440 aa		2.56	□□□□□ -2
NCL1	YBL024W	SPO11	P23179	398 aa		2.56	□□□□□ -2
NCL1	YBL024W	RPN12	P32496	274 aa		2.56	□□□□□ -2
NCL1	YBL024W	GLG1	P36143	616 aa		2.56	□□□□□ -2
NCL1	YBL024W	NPR3	P38742	1146 aa		2.56	□□□□□ -2
NCL1	YBL024W	ARB1	P40024	610 aa	Known RBP	2.56	□□□□□ -2
NCL1	YBL024W	BST1	P43571	1029 aa		2.56	□□□□□ -2
NCL1	YBL024W	CTR1	P49573	406 aa		2.56	□□□□□ -2
NCL1	YBL024W	YGR151C	P53287	111 aa		2.56	□□□□□ -2
NCL1	YBL024W	DIP5	P53388	608 aa		2.56	□□□□□ -2
NCL1	YBL024W	YMR018W	Q04364	514 aa		2.56	□□□□□ -2
NCL1	YBL024W	SUL2	Q12325	893 aa		2.56	□□□□□ -2
NCL1	YBL024W	CTT1	P06115	562 aa		2.55	□□□□□ -2
NCL1	YBL024W	ILV6	P25605	309 aa	Known RBP	2.55	□□□□□ -2
NCL1	YBL024W	MUD2	P36084	527 aa	Known RBP	2.55	□□□□□ -2
NCL1	YBL024W	UBS1	P38290	277 aa		2.55	□□□□□ -2
NCL1	YBL024W	FSH1	P38777	243 aa	Known RBP	2.55	□□□□□ -2
NCL1	YBL024W	KAP123	P40069	1113 aa	Known RBP	2.55	□□□□□ -2
NCL1	YBL024W	DPH1	P40487	425 aa	Known RBP	2.55	□□□□□ -2
NCL1	YBL024W	FAF1	P40546	346 aa	Predicted RBP	2.55	□□□□□ -2
NCL1	YBL024W	NMA2	P53204	395 aa		2.55	□□□□□ -2
NCL1	YBL024W	ESF2	P53743	316 aa	Known RBP	2.55	□□□□□ -2
NCL1	YBL024W	APM1	Q00776	475 aa	Predicted RBP	2.55	□□□□□ -2
NCL1	YBL024W	YSH1	Q06224	779 aa	Predicted RBP	2.55	□□□□□ -2
NCL1	YBL024W	LEU2	P04173	364 aa	Predicted RBP	2.54	□□□□□ -2
NCL1	YBL024W	TUB1	P09733	447 aa	Known RBP	2.54	□□□□□ -2
NCL1	YBL024W	CAP1	P28495	268 aa	Known RBP	2.54	□□□□□ -2
NCL1	YBL024W	PEX2	P32800	271 aa		2.54	□□□□□ -2
NCL1	YBL024W	DHR2	P36009	735 aa	Predicted RBP	2.54	□□□□□ -2
NCL1	YBL024W	MRPL36	P36531	177 aa		2.54	□□□□□ -2
NCL1	YBL024W	KSP1	P38691	1029 aa	Known RBP	2.54	□□□□□ -2
NCL1	YBL024W	BDH2	P39713	417 aa		2.54	□□□□□ -2
NCL1	YBL024W	YER010C	P40011	234 aa		2.54	□□□□□ -2
NCL1	YBL024W	IDS2	P46958	469 aa		2.54	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms