RNA–Protein interactions for RNA: RUF22

RUF22, Transcript of RNA of Unknown Function, yeast

Gene RUF22, Length 515 nt, Biotype ncRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUF22	RUF22	YPK1	P12688	680 aa	Known RBP	3.88	□□□□□ -1.79
RUF22	RUF22	AIM17	P23180	465 aa	Known RBP	3.88	□□□□□ -1.79
RUF22	RUF22	MTG2	P38860	518 aa		3.88	□□□□□ -1.79
RUF22	RUF22	RRP8	P38961	392 aa	Known RBP	3.88	□□□□□ -1.79
RUF22	RUF22	GZF3	P42944	551 aa	Known RBP	3.88	□□□□□ -1.79
RUF22	RUF22	BOP3	P53958	396 aa		3.88	□□□□□ -1.79
RUF22	RUF22	MTD1	Q02046	320 aa	Known RBP	3.88	□□□□□ -1.79
RUF22	RUF22	ECM9	Q02202	377 aa		3.88	□□□□□ -1.79
RUF22	RUF22	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	3.88	□□□□□ -1.79	not detected
RUF22	RUF22	NOP14	Q99207	810 aa	Known RBP	3.88	□□□□□ -1.79
RUF22	RUF22	PNO1	Q99216	274 aa	Known RBP	3.88	□□□□□ -1.79
RUF22	RUF22	DGR2	P32330	852 aa		3.87	□□□□□ -1.79
RUF22	RUF22	DSS4	P32601	143 aa		3.87	□□□□□ -1.79
RUF22	RUF22	YIR016W	P40572	265 aa		3.87	□□□□□ -1.79
RUF22	RUF22	CIR1	P42940	261 aa		3.87	□□□□□ -1.79
RUF22	RUF22	LYS20	P48570	428 aa	Known RBP	3.87	□□□□□ -1.79
RUF22	RUF22	SQS1	P53866	767 aa	Known RBP	3.87	□□□□□ -1.79
RUF22	RUF22	VTC3	Q02725	835 aa		3.87	□□□□□ -1.79
RUF22	RUF22	GRS2	Q06817	618 aa		3.87	□□□□□ -1.79
RUF22	RUF22	ILS1	P09436	1072 aa	Known RBP	3.86	□□□□□ -1.79
RUF22	RUF22	CDC26	P14724	124 aa		3.86	□□□□□ -1.79
RUF22	RUF22	RPL8A	P17076	256 aa	Known RBP	3.86	□□□□□ -1.79
RUF22	RUF22	DID4	P36108	232 aa		3.86	□□□□□ -1.79
RUF22	RUF22	NDD1	Q08887	554 aa		3.86	□□□□□ -1.79
RUF22	RUF22	ATX2	Q12067	313 aa		3.86	□□□□□ -1.79
RUF22	RUF22	UBX3	Q12229	455 aa		3.86	□□□□□ -1.79
RUF22	RUF22	NOP1	P15646	327 aa	Known RBP	3.85	□□□□□ -1.79
RUF22	RUF22	AEP2	P22136	580 aa		3.85	□□□□□ -1.79
RUF22	RUF22	RPT3	P33298	428 aa	Known RBP	3.85	□□□□□ -1.79
RUF22	RUF22	FTH1	P38310	465 aa		3.85	□□□□□ -1.79
RUF22	RUF22	TOM71	P38825	639 aa	Known RBP	3.85	□□□□□ -1.79
RUF22	RUF22	RAD26	P40352	1085 aa		3.85	□□□□□ -1.79
RUF22	RUF22	LAS21	P40367	830 aa		3.85	□□□□□ -1.79
RUF22	RUF22	SNU56	Q03782	492 aa	Known RBP	3.85	□□□□□ -1.79
RUF22	RUF22	YPT1	P01123	206 aa	Known RBP	3.84	□□□□□ -1.79
RUF22	RUF22	PCK1	P10963	549 aa		3.84	□□□□□ -1.79
RUF22	RUF22	CBP3	P21560	335 aa		3.84	□□□□□ -1.79
RUF22	RUF22	CDC5	P32562	705 aa		3.84	□□□□□ -1.79
RUF22	RUF22	MNN11	P46985	422 aa	Known RBP	3.84	□□□□□ -1.79
RUF22	RUF22	AAT1	Q01802	451 aa		3.84	□□□□□ -1.79
RUF22	RUF22	RAD33	Q04231	177 aa		3.84	□□□□□ -1.79
RUF22	RUF22	YTM1	Q12024	460 aa	Predicted RBP	3.84	□□□□□ -1.79
RUF22	RUF22	MAK32	P23060	363 aa		3.83	□□□□□ -1.8
RUF22	RUF22	RRP14	P36080	434 aa	Known RBP	3.83	□□□□□ -1.8
RUF22	RUF22	FAT1	P38225	669 aa		3.83	□□□□□ -1.8
RUF22	RUF22	PEF1	P53238	335 aa		3.83	□□□□□ -1.8
RUF22	RUF22	COG2	P53271	262 aa		3.83	□□□□□ -1.8
RUF22	RUF22	SCW10	Q04951	389 aa		3.83	□□□□□ -1.8
RUF22	RUF22	FPR4	Q06205	392 aa	Predicted RBP	3.83	□□□□□ -1.8
RUF22	RUF22	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.83	□□□□□ -1.8	not detected
RUF22	RUF22	RMA1	P36001	430 aa	Known RBP	3.82	□□□□□ -1.8
RUF22	RUF22	TYS1	P36421	394 aa	Known RBP	3.82	□□□□□ -1.8
RUF22	RUF22	SDH8	P38345	138 aa		3.82	□□□□□ -1.8
RUF22	RUF22	RTT107	P38850	1070 aa		3.82	□□□□□ -1.8
RUF22	RUF22	MNN1	P39106	762 aa		3.82	□□□□□ -1.8
RUF22	RUF22	HLJ1	P48353	224 aa		3.82	□□□□□ -1.8
RUF22	RUF22	MTQ2	Q03920	221 aa	Predicted RBP	3.82	□□□□□ -1.8
RUF22	RUF22	DSE3	Q08729	430 aa		3.82	□□□□□ -1.8
RUF22	RUF22	GDA1	P32621	518 aa		3.81	□□□□□ -1.8
RUF22	RUF22	SCO2	P38072	301 aa		3.81	□□□□□ -1.8
RUF22	RUF22	NOP2	P40991	618 aa	Known RBP	3.81	□□□□□ -1.8
RUF22	RUF22	PHO2	P07269	559 aa		3.8	□□□□□ -1.8
RUF22	RUF22	IMD2	P38697	523 aa	Known RBP	3.8	□□□□□ -1.8
RUF22	RUF22	GND1	P38720	489 aa	Known RBP	3.8	□□□□□ -1.8
RUF22	RUF22	MAM1	P40065	302 aa		3.8	□□□□□ -1.8
RUF22	RUF22	YIL152W	P40455	235 aa		3.8	□□□□□ -1.8
RUF22	RUF22	CIN1	P40987	1014 aa		3.8	□□□□□ -1.8
RUF22	RUF22	IMD3	P50095	523 aa	Known RBP	3.8	□□□□□ -1.8
RUF22	RUF22	YNL092W	P53934	400 aa		3.8	□□□□□ -1.8
RUF22	RUF22	UTP14	Q04500	899 aa	Known RBP	3.8	□□□□□ -1.8
RUF22	RUF22	YTH1	Q06102	208 aa	Predicted RBP	3.8	□□□□□ -1.8
RUF22	RUF22	THI73	Q07904	523 aa		3.8	□□□□□ -1.8
RUF22	RUF22	GET3	Q12154	354 aa	Known RBP	3.8	□□□□□ -1.8
RUF22	RUF22	CHO2	P05374	869 aa	Known RBP	3.79	□□□□□ -1.8
RUF22	RUF22	RPS21A	P0C0V8	87 aa	Known RBP	3.79	□□□□□ -1.8
RUF22	RUF22	PLC1	P32383	869 aa		3.79	□□□□□ -1.8
RUF22	RUF22	RNR4	P49723	345 aa	Known RBP	3.79	□□□□□ -1.8
RUF22	RUF22	MDR1	P53258	950 aa		3.79	□□□□□ -1.8
RUF22	RUF22	CWH43	P25618	953 aa		3.78	□□□□□ -1.8
RUF22	RUF22	KES1	P35844	434 aa	Known RBP	3.78	□□□□□ -1.8
RUF22	RUF22	SRP68	P38687	599 aa	Known RBP	3.78	□□□□□ -1.8
RUF22	RUF22	YGL260W	P53056	76 aa		3.78	□□□□□ -1.8
RUF22	RUF22	YOR389W	Q08912	624 aa		3.78	□□□□□ -1.8
RUF22	RUF22	VPS5	Q92331	675 aa		3.78	□□□□□ -1.8
RUF22	RUF22	YCR043C	P25361	127 aa		3.77	□□□□□ -1.81
RUF22	RUF22	HXT4	P32467	576 aa		3.77	□□□□□ -1.81
RUF22	RUF22	ARC40	P38328	384 aa	Known RBP	3.77	□□□□□ -1.81
RUF22	RUF22	TES1	P41903	349 aa	Known RBP	3.77	□□□□□ -1.81
RUF22	RUF22	PMT3	P47190	753 aa		3.77	□□□□□ -1.81
RUF22	RUF22	NRT1	Q08485	598 aa		3.77	□□□□□ -1.81
RUF22	RUF22	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.77	□□□□□ -1.81	not detected
RUF22	RUF22	ADR1	P07248	1323 aa		3.76	□□□□□ -1.81
RUF22	RUF22	ALG12	P53730	551 aa		3.76	□□□□□ -1.81
RUF22	RUF22	PLM2	Q04383	521 aa		3.76	□□□□□ -1.81
RUF22	RUF22	MLH2	Q07980	695 aa		3.76	□□□□□ -1.81
RUF22	RUF22	NGL1	Q08213	363 aa	Known RBP	3.76	□□□□□ -1.81
RUF22	RUF22	LYS21	Q12122	440 aa	Known RBP	3.76	□□□□□ -1.81
RUF22	RUF22	GAL4	P04386	881 aa		3.75	□□□□□ -1.81
RUF22	RUF22	PPG1	P32838	368 aa		3.75	□□□□□ -1.81
RUF22	RUF22	UME1	Q03010	460 aa		3.75	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms