RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 IREB2P48200 963 aaKnown RBP20.6■□□□□ 0.89
PHGDH-234ENST00000642041 SUPT20HL1Q3ZLR7 823 aa20.6■□□□□ 0.89
PHGDH-234ENST00000642041 RNF20Q5VTR2 975 aa20.6■□□□□ 0.89
PHGDH-234ENST00000642041 ZSCAN25Q6NSZ9 544 aa20.6■□□□□ 0.89
PHGDH-234ENST00000642041 LPIN2Q92539 896 aa20.6■□□□□ 0.89
PHGDH-234ENST00000642041 FSD1Q9BTV5 496 aa20.6■□□□□ 0.89
PHGDH-234ENST00000642041 ZFYVE28Q9HCC9 887 aa20.6■□□□□ 0.89
PHGDH-234ENST00000642041 UNC80Q8N2C7 3258 aa20.6■□□□□ 0.89
PHGDH-234ENST00000642041 PUM3Q15397 648 aaKnown RBP20.59■□□□□ 0.89
PHGDH-234ENST00000642041 UBE2Q1Q7Z7E8 422 aa20.59■□□□□ 0.89
PHGDH-234ENST00000642041 MS4A4AQ96JQ5 239 aa20.59■□□□□ 0.89
PHGDH-234ENST00000642041 COA1Q9GZY4 146 aa20.59■□□□□ 0.89
PHGDH-234ENST00000642041 ANO2Q9NQ90 1003 aa20.59■□□□□ 0.89
PHGDH-234ENST00000642041 ZBTB22O15209 634 aa20.58■□□□□ 0.89
PHGDH-234ENST00000642041 IFIT1P09914 478 aaKnown RBP20.58■□□□□ 0.89
PHGDH-234ENST00000642041 TAF1CQ15572 869 aaPredicted RBP20.58■□□□□ 0.89
PHGDH-234ENST00000642041 ATP2B3Q16720 1220 aa20.58■□□□□ 0.89
PHGDH-234ENST00000642041 TTLL5Q6EMB2 1281 aa20.58■□□□□ 0.89
PHGDH-234ENST00000642041 TMED8Q6PL24 325 aaPredicted RBP20.58■□□□□ 0.89
PHGDH-234ENST00000642041 KIAA0825Q8IV33 1275 aa20.58■□□□□ 0.89
PHGDH-234ENST00000642041 ANKRD13AQ8IZ07 590 aa20.58■□□□□ 0.89
PHGDH-234ENST00000642041 NKX2-3Q8TAU0 364 aa20.58■□□□□ 0.89
PHGDH-234ENST00000642041 LRCH3Q96II8 777 aa20.58■□□□□ 0.89
PHGDH-234ENST00000642041 BOLA2Q9H3K6 86 aa20.58■□□□□ 0.89
PHGDH-234ENST00000642041 USP2O75604 605 aaPredicted RBP20.57■□□□□ 0.88
PHGDH-234ENST00000642041 SLC5A1P13866 664 aa20.57■□□□□ 0.88
PHGDH-234ENST00000642041 LRRC24Q50LG9 513 aa20.57■□□□□ 0.88
PHGDH-234ENST00000642041 TTC39AQ5SRH9 613 aa20.57■□□□□ 0.88
PHGDH-234ENST00000642041 KBTBD3Q8NAB2 608 aa20.57■□□□□ 0.88
PHGDH-234ENST00000642041 DBNDD2Q9BQY9 259 aa20.57■□□□□ 0.88
PHGDH-234ENST00000642041 HELLSQ9NRZ9 838 aa20.57■□□□□ 0.88
PHGDH-234ENST00000642041 BSDC1Q9NW68 430 aaPredicted RBP20.57■□□□□ 0.88
PHGDH-234ENST00000642041 GNRH1P01148 92 aa20.56■□□□□ 0.88
PHGDH-234ENST00000642041 ZKSCAN1P17029 563 aaPredicted RBP20.56■□□□□ 0.88
PHGDH-234ENST00000642041 PRMT2P55345 433 aa20.56■□□□□ 0.88
PHGDH-234ENST00000642041 DLGAP5Q15398 846 aa20.56■□□□□ 0.88
PHGDH-234ENST00000642041 TSHZ3Q63HK5 1081 aa20.56■□□□□ 0.88
PHGDH-234ENST00000642041 PUS3Q9BZE2 481 aaKnown RBP20.56■□□□□ 0.88
PHGDH-234ENST00000642041 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.56■□□□□ 0.881e-14■□□□□ 11
PHGDH-234ENST00000642041 ZNF804BA4D1E1 1349 aa20.55■□□□□ 0.88
PHGDH-234ENST00000642041 HSPA4P34932 840 aa20.55■□□□□ 0.88
PHGDH-234ENST00000642041 KIF22Q14807 665 aa20.55■□□□□ 0.88
PHGDH-234ENST00000642041 MTFR1Q15390 333 aa20.55■□□□□ 0.88
PHGDH-234ENST00000642041 MTMR14Q8NCE2 650 aa20.55■□□□□ 0.88
PHGDH-234ENST00000642041 BRI3BPQ8WY22 251 aa20.55■□□□□ 0.88
PHGDH-234ENST00000642041 OPTNQ96CV9 577 aa20.55■□□□□ 0.88
PHGDH-234ENST00000642041 ANKRD2Q9GZV1 360 aa20.55■□□□□ 0.88
PHGDH-234ENST00000642041 PAG1Q9NWQ8 432 aa20.55■□□□□ 0.88
PHGDH-234ENST00000642041 HMG20BQ9P0W2 317 aa20.55■□□□□ 0.88
PHGDH-234ENST00000642041 TIMM10P62072 90 aa20.54■□□□□ 0.88
PHGDH-234ENST00000642041 NBPF12Q5TAG4 269 aaPredicted RBP20.54■□□□□ 0.88
PHGDH-234ENST00000642041 GPR153Q6NV75 609 aa20.54■□□□□ 0.88
PHGDH-234ENST00000642041 CWC27Q6UX04 472 aaKnown RBP20.54■□□□□ 0.88
PHGDH-234ENST00000642041 XAGE2Q96GT9 111 aa20.54■□□□□ 0.88
PHGDH-234ENST00000642041 TBC1D2Q9BYX2 928 aa20.54■□□□□ 0.88
PHGDH-234ENST00000642041 GJA8P48165 433 aa20.53■□□□□ 0.88
PHGDH-234ENST00000642041 LACTBP83111 547 aaPredicted RBP20.53■□□□□ 0.88
PHGDH-234ENST00000642041 UBE4AQ14139 1066 aa20.53■□□□□ 0.88
PHGDH-234ENST00000642041 COL25A1Q9BXS0 654 aaPredicted RBP20.53■□□□□ 0.88
PHGDH-234ENST00000642041 ARHGAP39Q9C0H5 1083 aa20.53■□□□□ 0.88
PHGDH-234ENST00000642041 ELP3Q9H9T3 547 aa20.53■□□□□ 0.88
PHGDH-234ENST00000642041 GNL3LQ9NVN8 582 aaKnown RBP20.53■□□□□ 0.88
PHGDH-234ENST00000642041 CIZ1Q9ULV3 898 aaPredicted RBP20.53■□□□□ 0.88
PHGDH-234ENST00000642041 MINPP1Q9UNW1 487 aa20.53■□□□□ 0.88
PHGDH-234ENST00000642041 K7ELQ4 463 aaPredicted RBP20.52■□□□□ 0.88
PHGDH-234ENST00000642041 PSMA5P28066 241 aa20.52■□□□□ 0.88
PHGDH-234ENST00000642041 GTF2A2P52657 109 aa20.52■□□□□ 0.88
PHGDH-234ENST00000642041 KRT32Q14532 448 aa20.52■□□□□ 0.88
PHGDH-234ENST00000642041 MCMDC2Q4G0Z9 681 aa20.52■□□□□ 0.88
PHGDH-234ENST00000642041 TXNRD3Q86VQ6 643 aa20.52■□□□□ 0.88
PHGDH-234ENST00000642041 VGLL2Q8N8G2 317 aa20.52■□□□□ 0.88
PHGDH-234ENST00000642041 TM6SF1Q9BZW5 370 aa20.52■□□□□ 0.88
PHGDH-234ENST00000642041 CCL15-CCL14A0A0B4J2E2 113 aa20.51■□□□□ 0.87
PHGDH-234ENST00000642041 WDHD1O75717 1129 aaPredicted RBP20.51■□□□□ 0.87
PHGDH-234ENST00000642041 GJB1P08034 283 aa20.51■□□□□ 0.87
PHGDH-234ENST00000642041 CHRNDQ07001 517 aa20.51■□□□□ 0.87
PHGDH-234ENST00000642041 CCL15Q16663 113 aa20.51■□□□□ 0.87
PHGDH-234ENST00000642041 FAM43AQ8N2R8 423 aa20.51■□□□□ 0.87
PHGDH-234ENST00000642041 KIF2CQ99661 725 aa20.51■□□□□ 0.87
PHGDH-234ENST00000642041 CWC22Q9HCG8 908 aaKnown RBP20.51■□□□□ 0.87
PHGDH-234ENST00000642041 TLR7Q9NYK1 1049 aaKnown RBP20.51■□□□□ 0.87
PHGDH-234ENST00000642041 STXBP5LQ9Y2K9 1186 aa20.51■□□□□ 0.87
PHGDH-234ENST00000642041 A0A1B0GUL6 1792 aa20.51■□□□□ 0.87
PHGDH-234ENST00000642041 MYO1BO43795 1136 aa20.5■□□□□ 0.87
PHGDH-234ENST00000642041 TLR2O60603 784 aa20.5■□□□□ 0.87
PHGDH-234ENST00000642041 FGFR2P21802 821 aa20.5■□□□□ 0.87
PHGDH-234ENST00000642041 GTF2IP78347 998 aa20.5■□□□□ 0.87
PHGDH-234ENST00000642041 ECM29Q5VYK3 1845 aa20.5■□□□□ 0.87
PHGDH-234ENST00000642041 ARAP2Q8WZ64 1704 aa20.5■□□□□ 0.87
PHGDH-234ENST00000642041 SEMA3EO15041 775 aa20.49■□□□□ 0.87
PHGDH-234ENST00000642041 MAP4K4O95819 1239 aaPredicted RBP20.49■□□□□ 0.87
PHGDH-234ENST00000642041 HSP90AA1P07900 732 aaKnown RBP20.49■□□□□ 0.87
PHGDH-234ENST00000642041 PDIA4P13667 645 aaKnown RBP20.49■□□□□ 0.87
PHGDH-234ENST00000642041 ARID4AP29374 1257 aaPredicted RBP20.49■□□□□ 0.87
PHGDH-234ENST00000642041 DEFB123Q8N688 67 aa20.49■□□□□ 0.87
PHGDH-234ENST00000642041 MAP4K1Q92918 833 aa20.49■□□□□ 0.87
PHGDH-234ENST00000642041 KCNB2Q92953 911 aa20.49■□□□□ 0.87
PHGDH-234ENST00000642041 CHMP4CQ96CF2 233 aa20.49■□□□□ 0.87
PHGDH-234ENST00000642041 DNAJC2Q99543 621 aaKnown RBP20.49■□□□□ 0.87
PHGDH-234ENST00000642041 LSG1Q9H089 658 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms