RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	KCNQ4	P56696	695 aa		19.47	■□□□□ 0.71
PHGDH-223	ENST00000641597	DPF2	Q92785	391 aa		19.47	■□□□□ 0.71
PHGDH-223	ENST00000641597	ZNF512B	Q96KM6	892 aa	Predicted RBP	19.47	■□□□□ 0.71
PHGDH-223	ENST00000641597	CCDC94	Q9BW85	323 aa	Predicted RBP	19.47	■□□□□ 0.71
PHGDH-223	ENST00000641597	NAT10	Q9H0A0	1025 aa	Known RBP	19.47	■□□□□ 0.71
PHGDH-223	ENST00000641597	ECM29	Q5VYK3	1845 aa		19.47	■□□□□ 0.71
PHGDH-223	ENST00000641597	hCG_1642624	A0A1W2PR95	340 aa		19.47	■□□□□ 0.71
PHGDH-223	ENST00000641597	EXOC5	O00471	708 aa		19.47	■□□□□ 0.71
PHGDH-223	ENST00000641597	LONRF3	Q496Y0	759 aa		19.47	■□□□□ 0.71
PHGDH-223	ENST00000641597	CEP135	Q66GS9	1140 aa		19.47	■□□□□ 0.71
PHGDH-223	ENST00000641597	SDR42E1	Q8WUS8	393 aa		19.47	■□□□□ 0.71
PHGDH-223	ENST00000641597	SLC12A7	Q9Y666	1083 aa		19.47	■□□□□ 0.71
PHGDH-223	ENST00000641597	PATL2	C9JE40	543 aa	Known RBP	19.46	■□□□□ 0.71
PHGDH-223	ENST00000641597	INTS5	Q6P9B9	1019 aa	Known RBP	19.46	■□□□□ 0.71
PHGDH-223	ENST00000641597	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	19.46	■□□□□ 0.71
PHGDH-223	ENST00000641597	STRC	Q7RTU9	1775 aa		19.46	■□□□□ 0.71
PHGDH-223	ENST00000641597	PDCL2	Q8N4E4	241 aa		19.46	■□□□□ 0.71
PHGDH-223	ENST00000641597	SLC4A4	Q9Y6R1	1079 aa		19.46	■□□□□ 0.71
PHGDH-223	ENST00000641597	TDO2	P48775	406 aa		19.45	■□□□□ 0.7
PHGDH-223	ENST00000641597	NLRP12	P59046	1061 aa		19.45	■□□□□ 0.7
PHGDH-223	ENST00000641597	RBM6	P78332	1123 aa	Known RBP	19.45	■□□□□ 0.7
PHGDH-223	ENST00000641597	EVX2	Q03828	476 aa		19.45	■□□□□ 0.7
PHGDH-223	ENST00000641597	NR5A1	Q13285	461 aa		19.45	■□□□□ 0.7
PHGDH-223	ENST00000641597	WDR19	Q8NEZ3	1342 aa		19.45	■□□□□ 0.7
PHGDH-223	ENST00000641597	UQCRFS1P1	P0C7P4	283 aa		19.45	■□□□□ 0.7
PHGDH-223	ENST00000641597	IL6ST	P40189	918 aa	Predicted RBP	19.45	■□□□□ 0.7
PHGDH-223	ENST00000641597	METTL16	Q86W50	562 aa	Known RBP	19.45	■□□□□ 0.7
PHGDH-223	ENST00000641597	ANKRD36C	Q5JPF3	1778 aa		19.45	■□□□□ 0.7
PHGDH-223	ENST00000641597	CYP2D7	A0A087X1C5	515 aa		19.44	■□□□□ 0.7
PHGDH-223	ENST00000641597	SMTNL1	A8MU46	457 aa		19.44	■□□□□ 0.7
PHGDH-223	ENST00000641597	SLC5A1	P13866	664 aa		19.44	■□□□□ 0.7
PHGDH-223	ENST00000641597	TOB1	P50616	345 aa	Predicted RBP	19.44	■□□□□ 0.7
PHGDH-223	ENST00000641597	MAP3K12	Q12852	859 aa		19.44	■□□□□ 0.7
PHGDH-223	ENST00000641597	OXER1	Q8TDS5	423 aa		19.44	■□□□□ 0.7
PHGDH-223	ENST00000641597	NUP133	Q8WUM0	1156 aa		19.44	■□□□□ 0.7
PHGDH-223	ENST00000641597	ANKRD7	Q92527	254 aa		19.44	■□□□□ 0.7
PHGDH-223	ENST00000641597	CHMP4C	Q96CF2	233 aa		19.44	■□□□□ 0.7
PHGDH-223	ENST00000641597	MROH5	Q6ZUA9	1318 aa		19.44	■□□□□ 0.7
PHGDH-223	ENST00000641597	BMP6	P22004	513 aa		19.44	■□□□□ 0.7
PHGDH-223	ENST00000641597	CRKL	P46109	303 aa	Known RBP	19.44	■□□□□ 0.7
PHGDH-223	ENST00000641597	EIF5	P55010	431 aa	Known RBP	19.44	■□□□□ 0.7
PHGDH-223	ENST00000641597	AKNAD1	Q5T1N1	836 aa		19.44	■□□□□ 0.7
PHGDH-223	ENST00000641597	C3orf67	Q6ZVT6	689 aa		19.44	■□□□□ 0.7
PHGDH-223	ENST00000641597	MTERF4	Q7Z6M4	381 aa	Known RBP	19.44	■□□□□ 0.7
PHGDH-223	ENST00000641597	GRAMD1C	Q8IYS0	662 aa		19.44	■□□□□ 0.7
PHGDH-223	ENST00000641597	CCAR2	Q8N163	923 aa	Known RBP	19.44	■□□□□ 0.7
PHGDH-223	ENST00000641597	CCDC112	Q8NEF3	446 aa		19.44	■□□□□ 0.7
PHGDH-223	ENST00000641597	ABCF2	Q9UG63	623 aa		19.44	■□□□□ 0.7
PHGDH-223	ENST00000641597	HPSE	Q9Y251	543 aa		19.44	■□□□□ 0.7
PHGDH-223	ENST00000641597	DISP2	A7MBM2	1401 aa		19.44	■□□□□ 0.7
PHGDH-223	ENST00000641597	FAM205C	A6NFA0	338 aa		19.43	■□□□□ 0.7
PHGDH-223	ENST00000641597	MINDY4B	A8MYZ0	360 aa		19.43	■□□□□ 0.7
PHGDH-223	ENST00000641597	ATP6V1A	P38606	617 aa		19.43	■□□□□ 0.7
PHGDH-223	ENST00000641597	PDE4B	Q07343	736 aa		19.43	■□□□□ 0.7
PHGDH-223	ENST00000641597	ITPK1	Q13572	414 aa		19.43	■□□□□ 0.7
PHGDH-223	ENST00000641597	E4F1	Q66K89	784 aa	Predicted RBP	19.43	■□□□□ 0.7
PHGDH-223	ENST00000641597	MFSD6	Q6ZSS7	791 aa		19.43	■□□□□ 0.7
PHGDH-223	ENST00000641597	NYAP1	Q6ZVC0	841 aa		19.43	■□□□□ 0.7
PHGDH-223	ENST00000641597	TMEM87B	Q96K49	555 aa		19.43	■□□□□ 0.7
PHGDH-223	ENST00000641597	TAF1	P21675	1872 aa		19.43	■□□□□ 0.7
PHGDH-223	ENST00000641597	ADAMTS2	O95450	1211 aa		19.43	■□□□□ 0.7
PHGDH-223	ENST00000641597	PTPN14	Q15678	1187 aa		19.43	■□□□□ 0.7
PHGDH-223	ENST00000641597	ZNF827	Q17R98	1081 aa		19.43	■□□□□ 0.7
PHGDH-223	ENST00000641597	USP49	Q70CQ1	688 aa		19.43	■□□□□ 0.7
PHGDH-223	ENST00000641597	SGMS1	Q86VZ5	419 aa		19.43	■□□□□ 0.7
PHGDH-223	ENST00000641597	SHISA4	Q96DD7	197 aa		19.43	■□□□□ 0.7
PHGDH-223	ENST00000641597	ERVV-1	B6SEH8	477 aa		19.42	■□□□□ 0.7
PHGDH-223	ENST00000641597	CDKL5	O76039	1030 aa		19.42	■□□□□ 0.7
PHGDH-223	ENST00000641597	GYG1	P46976	350 aa		19.42	■□□□□ 0.7
PHGDH-223	ENST00000641597	LRP2BP	Q9P2M1	347 aa		19.42	■□□□□ 0.7
PHGDH-223	ENST00000641597	NIP7	Q9Y221	180 aa	Known RBP eCLIP	19.42	■□□□□ 0.7
PHGDH-223	ENST00000641597	BAZ2B	Q9UIF8	2168 aa	Known RBP	19.42	■□□□□ 0.7
PHGDH-223	ENST00000641597	TMEM232	C9JQI7	657 aa		19.42	■□□□□ 0.7
PHGDH-223	ENST00000641597	NPHP1	O15259	732 aa		19.42	■□□□□ 0.7
PHGDH-223	ENST00000641597	SSRP1	Q08945	709 aa	Known RBP	19.42	■□□□□ 0.7
PHGDH-223	ENST00000641597	PDILT	Q8N807	584 aa		19.42	■□□□□ 0.7
PHGDH-223	ENST00000641597	PRDM1	O75626	825 aa		19.41	■□□□□ 0.7
PHGDH-223	ENST00000641597	FANCC	Q00597	558 aa		19.41	■□□□□ 0.7
PHGDH-223	ENST00000641597	CHRND	Q07001	517 aa		19.41	■□□□□ 0.7
PHGDH-223	ENST00000641597	TRIM29	Q14134	588 aa		19.41	■□□□□ 0.7
PHGDH-223	ENST00000641597	CPLX2	Q6PUV4	134 aa	Known RBP	19.41	■□□□□ 0.7
PHGDH-223	ENST00000641597	DIS3L2	Q8IYB7	885 aa	Known RBP	19.41	■□□□□ 0.7
PHGDH-223	ENST00000641597	UTP14A	Q9BVJ6	771 aa	Known RBP	19.41	■□□□□ 0.7
PHGDH-223	ENST00000641597	ZNF215	Q9UL58	517 aa	Predicted RBP	19.41	■□□□□ 0.7
PHGDH-223	ENST00000641597	PCDHB6	Q9Y5E3	794 aa		19.41	■□□□□ 0.7
PHGDH-223	ENST00000641597	PCDHA5	Q9Y5H7	936 aa		19.41	■□□□□ 0.7
PHGDH-223	ENST00000641597	RESP18	Q5W5W9	173 aa		19.41	■□□□□ 0.7
PHGDH-223	ENST00000641597	LRRN4CL	Q8ND94	238 aa		19.41	■□□□□ 0.7
PHGDH-223	ENST00000641597	KCNH3	Q9ULD8	1083 aa		19.41	■□□□□ 0.7
PHGDH-223	ENST00000641597	PRR29	P0C7W0	189 aa		19.4	■□□□□ 0.7
PHGDH-223	ENST00000641597	CHD4	Q14839	1912 aa		19.4	■□□□□ 0.7
PHGDH-223	ENST00000641597	CAMTA2	O94983	1202 aa		19.4	■□□□□ 0.7
PHGDH-223	ENST00000641597	NOSTRIN	Q8IVI9	506 aa		19.4	■□□□□ 0.7
PHGDH-223	ENST00000641597	OSBPL5	Q9H0X9	879 aa	Predicted RBP	19.4	■□□□□ 0.7
PHGDH-223	ENST00000641597	CCDC87	Q9NVE4	849 aa		19.4	■□□□□ 0.7
PHGDH-223	ENST00000641597	FANCL	Q9NW38	375 aa		19.4	■□□□□ 0.7
PHGDH-223	ENST00000641597	TUBE1	Q9UJT0	475 aa		19.4	■□□□□ 0.7
PHGDH-223	ENST00000641597	FMNL1	O95466	1100 aa	Predicted RBP	19.39	■□□□□ 0.7
PHGDH-223	ENST00000641597	LIFR	P42702	1097 aa		19.39	■□□□□ 0.7
PHGDH-223	ENST00000641597	ALX1	Q15699	326 aa		19.39	■□□□□ 0.7

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