RNA–Protein interactions for RNA: ENST00000640939.1

GRAMD1B-217, Transcript of GRAM domain containing 1B, humanhuman

TSL 5 BASIC

Gene GRAMD1B, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-217ENST00000640939 OPTNQ96CV9 577 aa27.44■■□□□ 1.98
GRAMD1B-217ENST00000640939 NOL10Q9BSC4 688 aaKnown RBP27.44■■□□□ 1.98
GRAMD1B-217ENST00000640939 ZNF341Q9BYN7 854 aa27.44■■□□□ 1.98
GRAMD1B-217ENST00000640939 DOCK2Q92608 1830 aa27.44■■□□□ 1.98
GRAMD1B-217ENST00000640939 SH3RF3Q8TEJ3 882 aaPredicted RBP27.43■■□□□ 1.98
GRAMD1B-217ENST00000640939 DCTPP1Q9H773 170 aa27.43■■□□□ 1.98
GRAMD1B-217ENST00000640939 AATFQ9NY61 560 aaKnown RBP eCLIP27.43■■□□□ 1.98
GRAMD1B-217ENST00000640939 DDTLA6NHG4 134 aaPredicted RBP27.42■■□□□ 1.98
GRAMD1B-217ENST00000640939 TEX11Q8IYF3 940 aa27.42■■□□□ 1.98
GRAMD1B-217ENST00000640939 CASP8AP2Q9UKL3 1982 aa27.41■■□□□ 1.98
GRAMD1B-217ENST00000640939 MANSC4A6NHS7 340 aaPredicted RBP27.41■■□□□ 1.98
GRAMD1B-217ENST00000640939 CYP7A1P22680 504 aa27.41■■□□□ 1.98
GRAMD1B-217ENST00000640939 DNAJC2Q99543 621 aaKnown RBP27.41■■□□□ 1.98
GRAMD1B-217ENST00000640939 SNCAIPQ9Y6H5 919 aa27.41■■□□□ 1.98
GRAMD1B-217ENST00000640939 BAG3O95817 575 aa27.4■■□□□ 1.98
GRAMD1B-217ENST00000640939 MAP4K4O95819 1239 aaPredicted RBP27.4■■□□□ 1.98
GRAMD1B-217ENST00000640939 INPP5BP32019 993 aa27.4■■□□□ 1.98
GRAMD1B-217ENST00000640939 MAGEB6Q8N7X4 407 aa27.4■■□□□ 1.98
GRAMD1B-217ENST00000640939 OTUD5Q96G74 571 aa27.4■■□□□ 1.98
GRAMD1B-217ENST00000640939 ATRNL1Q5VV63 1379 aa27.39■■□□□ 1.98
GRAMD1B-217ENST00000640939 SLURP2P0DP57 97 aa27.39■■□□□ 1.98
GRAMD1B-217ENST00000640939 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.39■■□□□ 1.98
GRAMD1B-217ENST00000640939 LAMB1P07942 1786 aa27.39■■□□□ 1.98
GRAMD1B-217ENST00000640939 GOLIM4O00461 696 aa27.38■■□□□ 1.97
GRAMD1B-217ENST00000640939 TBC1D8O95759 1140 aa27.38■■□□□ 1.97
GRAMD1B-217ENST00000640939 PPP4CP60510 307 aa27.38■■□□□ 1.97
GRAMD1B-217ENST00000640939 MAP3K12Q12852 859 aa27.38■■□□□ 1.97
GRAMD1B-217ENST00000640939 ZNF112Q9UJU3 913 aa27.38■■□□□ 1.97
GRAMD1B-217ENST00000640939 SPDYE5A6NIY4 337 aa27.37■■□□□ 1.97
GRAMD1B-217ENST00000640939 IGSF3O75054 1194 aa27.37■■□□□ 1.97
GRAMD1B-217ENST00000640939 NPM3O75607 178 aaKnown RBP27.37■■□□□ 1.97
GRAMD1B-217ENST00000640939 DYNLL1P63167 89 aaKnown RBP27.37■■□□□ 1.97
GRAMD1B-217ENST00000640939 MIGA1Q8NAN2 632 aa27.37■■□□□ 1.97
GRAMD1B-217ENST00000640939 EDC3Q96F86 508 aaKnown RBP27.37■■□□□ 1.97
GRAMD1B-217ENST00000640939 OSBPL5Q9H0X9 879 aaPredicted RBP27.37■■□□□ 1.97
GRAMD1B-217ENST00000640939 BOLA2Q9H3K6 86 aa27.37■■□□□ 1.97
GRAMD1B-217ENST00000640939 IGF2BP3O00425 579 aaKnown RBP eCLIP27.36■■□□□ 1.97
GRAMD1B-217ENST00000640939 PLCG2P16885 1265 aa27.36■■□□□ 1.97
GRAMD1B-217ENST00000640939 INHBEP58166 350 aa27.36■■□□□ 1.97
GRAMD1B-217ENST00000640939 TTF1Q15361 905 aaPredicted RBP27.36■■□□□ 1.97
GRAMD1B-217ENST00000640939 IFNL1Q8IU54 200 aa27.36■■□□□ 1.97
GRAMD1B-217ENST00000640939 CDK5RAP2Q96SN8 1893 aa27.36■■□□□ 1.97
GRAMD1B-217ENST00000640939 ATP5JP18859 108 aa27.35■■□□□ 1.97
GRAMD1B-217ENST00000640939 IFFO2Q5TF58 517 aa27.35■■□□□ 1.97
GRAMD1B-217ENST00000640939 ERO1BQ86YB8 467 aa27.35■■□□□ 1.97
GRAMD1B-217ENST00000640939 TGFBRAP1Q8WUH2 860 aa27.35■■□□□ 1.97
GRAMD1B-217ENST00000640939 MAPKAPK5Q8IW41 473 aa27.34■■□□□ 1.97
GRAMD1B-217ENST00000640939 MS4A4AQ96JQ5 239 aa27.34■■□□□ 1.97
GRAMD1B-217ENST00000640939 FAM196BA6NMK8 535 aa27.33■■□□□ 1.97
GRAMD1B-217ENST00000640939 PHF20L1A8MW92 1017 aa27.33■■□□□ 1.97
GRAMD1B-217ENST00000640939 PTPN18Q99952 460 aa27.33■■□□□ 1.97
GRAMD1B-217ENST00000640939 R3HDMLQ9H3Y0 253 aa27.33■■□□□ 1.97
GRAMD1B-217ENST00000640939 COL2A1P02458 1487 aaPredicted RBP27.32■■□□□ 1.96
GRAMD1B-217ENST00000640939 FOCADQ5VW36 1801 aa27.32■■□□□ 1.96
GRAMD1B-217ENST00000640939 TESPA1A2RU30 521 aaPredicted RBP27.32■■□□□ 1.96
GRAMD1B-217ENST00000640939 GTF2A2P52657 109 aa27.32■■□□□ 1.96
GRAMD1B-217ENST00000640939 MAP3K10Q02779 954 aa27.32■■□□□ 1.96
GRAMD1B-217ENST00000640939 SLC9C2Q5TAH2 1124 aa27.32■■□□□ 1.96
GRAMD1B-217ENST00000640939 PAG1Q9NWQ8 432 aa27.32■■□□□ 1.96
GRAMD1B-217ENST00000640939 CCL15-CCL14A0A0B4J2E2 113 aa27.31■■□□□ 1.96
GRAMD1B-217ENST00000640939 IRF6O14896 467 aa27.31■■□□□ 1.96
GRAMD1B-217ENST00000640939 ALDH1A1P00352 501 aa27.31■■□□□ 1.96
GRAMD1B-217ENST00000640939 PDE6AP16499 860 aa27.31■■□□□ 1.96
GRAMD1B-217ENST00000640939 PPIL2Q13356 520 aa27.31■■□□□ 1.96
GRAMD1B-217ENST00000640939 CCL15Q16663 113 aa27.31■■□□□ 1.96
GRAMD1B-217ENST00000640939 NOL9Q5SY16 702 aaKnown RBP27.31■■□□□ 1.96
GRAMD1B-217ENST00000640939 BRI3BPQ8WY22 251 aa27.31■■□□□ 1.96
GRAMD1B-217ENST00000640939 HAUS7Q99871 368 aa27.31■■□□□ 1.96
GRAMD1B-217ENST00000640939 FLT1P17948 1338 aa27.31■■□□□ 1.96
GRAMD1B-217ENST00000640939 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.3■■□□□ 1.96
GRAMD1B-217ENST00000640939 PPATQ06203 517 aa27.29■■□□□ 1.96
GRAMD1B-217ENST00000640939 TSHZ3Q63HK5 1081 aa27.29■■□□□ 1.96
GRAMD1B-217ENST00000640939 ECHDC1Q9NTX5 307 aa27.29■■□□□ 1.96
GRAMD1B-217ENST00000640939 SAP30BPQ9UHR5 308 aaKnown RBP27.29■■□□□ 1.96
GRAMD1B-217ENST00000640939 SUPT16HQ9Y5B9 1047 aaKnown RBP27.29■■□□□ 1.96
GRAMD1B-217ENST00000640939 ZNF532Q9HCE3 1301 aa27.29■■□□□ 1.96
GRAMD1B-217ENST00000640939 TBC1D12O60347 775 aa27.28■■□□□ 1.96
GRAMD1B-217ENST00000640939 OTUD7BQ6GQQ9 843 aa27.28■■□□□ 1.96
GRAMD1B-217ENST00000640939 TMED8Q6PL24 325 aaPredicted RBP27.28■■□□□ 1.96
GRAMD1B-217ENST00000640939 SCYL3Q8IZE3 742 aa27.28■■□□□ 1.96
GRAMD1B-217ENST00000640939 CFHR5Q9BXR6 569 aa27.28■■□□□ 1.96
GRAMD1B-217ENST00000640939 SIPA1L1O43166 1804 aa27.27■■□□□ 1.96
GRAMD1B-217ENST00000640939 GPR25O00155 361 aa27.27■■□□□ 1.96
GRAMD1B-217ENST00000640939 SNAPC2Q13487 334 aa27.27■■□□□ 1.96
GRAMD1B-217ENST00000640939 SLFNL1Q499Z3 407 aa27.27■■□□□ 1.96
GRAMD1B-217ENST00000640939 EXOC6Q8TAG9 804 aa27.27■■□□□ 1.96
GRAMD1B-217ENST00000640939 ZNF296Q8WUU4 475 aaPredicted RBP27.27■■□□□ 1.96
GRAMD1B-217ENST00000640939 PALD1Q9ULE6 856 aa27.27■■□□□ 1.96
GRAMD1B-217ENST00000640939 DOCK1Q14185 1865 aa27.26■■□□□ 1.95
GRAMD1B-217ENST00000640939 MAGEB6P1A0A0J9YX57 407 aa27.26■■□□□ 1.95
GRAMD1B-217ENST00000640939 TCRBV5S4A2TA0A5A2 114 aa27.26■■□□□ 1.95
GRAMD1B-217ENST00000640939 CAPN15O75808 1086 aa27.26■■□□□ 1.95
GRAMD1B-217ENST00000640939 CETPP11597 493 aa27.26■■□□□ 1.95
GRAMD1B-217ENST00000640939 USP5P45974 858 aa27.26■■□□□ 1.95
GRAMD1B-217ENST00000640939 SLC4A8Q2Y0W8 1093 aa27.26■■□□□ 1.95
GRAMD1B-217ENST00000640939 CERS3Q8IU89 383 aa27.26■■□□□ 1.95
GRAMD1B-217ENST00000640939 GPATCH3Q96I76 525 aa27.26■■□□□ 1.95
GRAMD1B-217ENST00000640939 RIOK1Q9BRS2 568 aaKnown RBP27.26■■□□□ 1.95
GRAMD1B-217ENST00000640939 DHX36Q9H2U1 1008 aaKnown RBP27.26■■□□□ 1.95
GRAMD1B-217ENST00000640939 PICK1Q9NRD5 415 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms