RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 CDAN1Q8IWY9 1227 aa17.3■□□□□ 0.36
SDHD-209ENST00000640554 MAGEB6Q8N7X4 407 aa17.3■□□□□ 0.36
SDHD-209ENST00000640554 WNK4Q96J92 1243 aa17.3■□□□□ 0.36
SDHD-209ENST00000640554 ZIC5Q96T25 663 aa17.3■□□□□ 0.36
SDHD-209ENST00000640554 DNAJC2Q99543 621 aaKnown RBP17.3■□□□□ 0.36
SDHD-209ENST00000640554 BCL11AQ9H165 835 aa17.3■□□□□ 0.36
SDHD-209ENST00000640554 BOLA2Q9H3K6 86 aa17.3■□□□□ 0.36
SDHD-209ENST00000640554 ANTXR1Q9H6X2 564 aa17.3■□□□□ 0.36
SDHD-209ENST00000640554 AATFQ9NY61 560 aaKnown RBP eCLIP17.3■□□□□ 0.36
SDHD-209ENST00000640554 FZD1Q9UP38 647 aa17.3■□□□□ 0.36
SDHD-209ENST00000640554 ATRNL1Q5VV63 1379 aa17.29■□□□□ 0.36
SDHD-209ENST00000640554 TTC41PQ6P2S7 1318 aa17.29■□□□□ 0.36
SDHD-209ENST00000640554 ERC2O15083 957 aa17.29■□□□□ 0.36
SDHD-209ENST00000640554 ALDH1A1P00352 501 aa17.29■□□□□ 0.36
SDHD-209ENST00000640554 PICALMQ13492 652 aa17.29■□□□□ 0.36
SDHD-209ENST00000640554 SLC9C2Q5TAH2 1124 aa17.29■□□□□ 0.36
SDHD-209ENST00000640554 ERO1BQ86YB8 467 aa17.29■□□□□ 0.36
SDHD-209ENST00000640554 ZFPM1Q8IX07 1006 aa17.29■□□□□ 0.36
SDHD-209ENST00000640554 CLMNQ96JQ2 1002 aa17.29■□□□□ 0.36
SDHD-209ENST00000640554 WRNIP1Q96S55 665 aa17.29■□□□□ 0.36
SDHD-209ENST00000640554 DDX4Q9NQI0 724 aaKnown RBP17.29■□□□□ 0.36
SDHD-209ENST00000640554 VGLL4Q14135 290 aa17.28■□□□□ 0.36
SDHD-209ENST00000640554 OTUD7BQ6GQQ9 843 aa17.28■□□□□ 0.36
SDHD-209ENST00000640554 MIGA2Q7L4E1 593 aa17.28■□□□□ 0.36
SDHD-209ENST00000640554 SH3RF3Q8TEJ3 882 aaPredicted RBP17.28■□□□□ 0.36
SDHD-209ENST00000640554 OSBPL5Q9H0X9 879 aaPredicted RBP17.28■□□□□ 0.36
SDHD-209ENST00000640554 NDUFB9Q9Y6M9 179 aa17.28■□□□□ 0.36
SDHD-209ENST00000640554 COL2A1P02458 1487 aaPredicted RBP17.28■□□□□ 0.36
SDHD-209ENST00000640554 AKAP11Q9UKA4 1901 aa17.27■□□□□ 0.36
SDHD-209ENST00000640554 SPDYE5A6NIY4 337 aa17.27■□□□□ 0.36
SDHD-209ENST00000640554 HSPA8P11142 646 aaKnown RBP17.27■□□□□ 0.36
SDHD-209ENST00000640554 PDE6AP16499 860 aa17.27■□□□□ 0.36
SDHD-209ENST00000640554 LRRFIP1Q32MZ4 808 aaKnown RBP17.27■□□□□ 0.36
SDHD-209ENST00000640554 ANKRD45Q5TZF3 282 aa17.27■□□□□ 0.36
SDHD-209ENST00000640554 ADGRA1Q86SQ6 560 aa17.27■□□□□ 0.36
SDHD-209ENST00000640554 EXOC6Q8TAG9 804 aa17.27■□□□□ 0.36
SDHD-209ENST00000640554 OPTNQ96CV9 577 aa17.27■□□□□ 0.36
SDHD-209ENST00000640554 ELP3Q9H9T3 547 aa17.27■□□□□ 0.36
SDHD-209ENST00000640554 RNF186Q9NXI6 227 aa17.27■□□□□ 0.36
SDHD-209ENST00000640554 PI4KBQ9UBF8 816 aa17.27■□□□□ 0.36
SDHD-209ENST00000640554 HERC5Q9UII4 1024 aaKnown RBP17.27■□□□□ 0.36
SDHD-209ENST00000640554 MYH2Q9UKX2 1941 aa17.27■□□□□ 0.35
SDHD-209ENST00000640554 DDTLA6NHG4 134 aaPredicted RBP17.26■□□□□ 0.35
SDHD-209ENST00000640554 GLRX3O76003 335 aaKnown RBP17.26■□□□□ 0.35
SDHD-209ENST00000640554 GTF2A2P52657 109 aa17.26■□□□□ 0.35
SDHD-209ENST00000640554 PPATQ06203 517 aa17.26■□□□□ 0.35
SDHD-209ENST00000640554 UBE3CQ15386 1083 aa17.26■□□□□ 0.35
SDHD-209ENST00000640554 NOL9Q5SY16 702 aaKnown RBP17.26■□□□□ 0.35
SDHD-209ENST00000640554 SH3BP5LQ7L8J4 393 aa17.26■□□□□ 0.35
SDHD-209ENST00000640554 FOXP4Q8IVH2 680 aaPredicted RBP17.26■□□□□ 0.35
SDHD-209ENST00000640554 TGFBRAP1Q8WUH2 860 aa17.26■□□□□ 0.35
SDHD-209ENST00000640554 MAGEB6P1A0A0J9YX57 407 aa17.25■□□□□ 0.35
SDHD-209ENST00000640554 TESPA1A2RU30 521 aaPredicted RBP17.25■□□□□ 0.35
SDHD-209ENST00000640554 CTNND1O60716 968 aaKnown RBP17.25■□□□□ 0.35
SDHD-209ENST00000640554 TRPA1O75762 1119 aa17.25■□□□□ 0.35
SDHD-209ENST00000640554 LBX1P52954 281 aa17.25■□□□□ 0.35
SDHD-209ENST00000640554 SMC5Q8IY18 1101 aa17.25■□□□□ 0.35
SDHD-209ENST00000640554 CFHR5Q9BXR6 569 aa17.25■□□□□ 0.35
SDHD-209ENST00000640554 SNCAIPQ9Y6H5 919 aa17.25■□□□□ 0.35
SDHD-209ENST00000640554 PCNTO95613 3336 aa17.25■□□□□ 0.35
SDHD-209ENST00000640554 ZNF532Q9HCE3 1301 aa17.24■□□□□ 0.35
SDHD-209ENST00000640554 PHF20L1A8MW92 1017 aa17.24■□□□□ 0.35
SDHD-209ENST00000640554 USP5P45974 858 aa17.24■□□□□ 0.35
SDHD-209ENST00000640554 MKRN3Q13064 507 aaKnown RBP17.24■□□□□ 0.35
SDHD-209ENST00000640554 PPIL2Q13356 520 aa17.24■□□□□ 0.35
SDHD-209ENST00000640554 NOM1Q5C9Z4 860 aaKnown RBP17.24■□□□□ 0.35
SDHD-209ENST00000640554 MIGA1Q8NAN2 632 aa17.24■□□□□ 0.35
SDHD-209ENST00000640554 ZKSCAN4Q969J2 545 aaPredicted RBP17.24■□□□□ 0.35
SDHD-209ENST00000640554 RIOK1Q9BRS2 568 aaKnown RBP17.24■□□□□ 0.35
SDHD-209ENST00000640554 CRNKL1Q9BZJ0 848 aaKnown RBP17.24■□□□□ 0.35
SDHD-209ENST00000640554 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.24■□□□□ 0.35
SDHD-209ENST00000640554 PICK1Q9NRD5 415 aa17.24■□□□□ 0.35
SDHD-209ENST00000640554 TAOK2Q9UL54 1235 aa17.24■□□□□ 0.35
SDHD-209ENST00000640554 FLT1P17948 1338 aa17.23■□□□□ 0.35
SDHD-209ENST00000640554 TCRBV5S4A2TA0A5A2 114 aa17.23■□□□□ 0.35
SDHD-209ENST00000640554 HLA-DOAP06340 250 aa17.23■□□□□ 0.35
SDHD-209ENST00000640554 ZFYP08048 801 aaPredicted RBP17.23■□□□□ 0.35
SDHD-209ENST00000640554 MX1P20591 662 aa17.23■□□□□ 0.35
SDHD-209ENST00000640554 INPP5BP32019 993 aa17.23■□□□□ 0.35
SDHD-209ENST00000640554 ADD2P35612 726 aa17.23■□□□□ 0.35
SDHD-209ENST00000640554 DYNLL1P63167 89 aaKnown RBP17.23■□□□□ 0.35
SDHD-209ENST00000640554 METTL16Q86W50 562 aaKnown RBP17.23■□□□□ 0.35
SDHD-209ENST00000640554 TICAM2Q86XR7 235 aa17.23■□□□□ 0.35
SDHD-209ENST00000640554 KBTBD3Q8NAB2 608 aa17.23■□□□□ 0.35
SDHD-209ENST00000640554 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.23■□□□□ 0.35
SDHD-209ENST00000640554 CETPP11597 493 aa17.22■□□□□ 0.35
SDHD-209ENST00000640554 GJA5P36382 358 aa17.22■□□□□ 0.35
SDHD-209ENST00000640554 SNAPC2Q13487 334 aa17.22■□□□□ 0.35
SDHD-209ENST00000640554 TTC6Q86TZ1 520 aa17.22■□□□□ 0.35
SDHD-209ENST00000640554 IFNL1Q8IU54 200 aa17.22■□□□□ 0.35
SDHD-209ENST00000640554 MAPKAPK5Q8IW41 473 aa17.22■□□□□ 0.35
SDHD-209ENST00000640554 SCYL3Q8IZE3 742 aa17.22■□□□□ 0.35
SDHD-209ENST00000640554 EDC3Q96F86 508 aaKnown RBP17.22■□□□□ 0.35
SDHD-209ENST00000640554 OTUD5Q96G74 571 aa17.22■□□□□ 0.35
SDHD-209ENST00000640554 MS4A4AQ96JQ5 239 aa17.22■□□□□ 0.35
SDHD-209ENST00000640554 TBC1D2Q9BYX2 928 aa17.22■□□□□ 0.35
SDHD-209ENST00000640554 ZCCHC17Q9NP64 241 aaKnown RBP17.22■□□□□ 0.35
SDHD-209ENST00000640554 GINM1Q9NU53 330 aa17.22■□□□□ 0.35
SDHD-209ENST00000640554 STAP2Q9UGK3 403 aa17.22■□□□□ 0.35
SDHD-209ENST00000640554 CXCL11O14625 94 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms