RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-231ENST00000639599 SH3TC2Q8TF17 1288 aa18.1■□□□□ 0.49
TARDBP-231ENST00000639599 CLUAP1Q96AJ1 413 aa18.1■□□□□ 0.49
TARDBP-231ENST00000639599 RAI14Q9P0K7 980 aa18.1■□□□□ 0.49
TARDBP-231ENST00000639599 BIN2Q9UBW5 565 aaPredicted RBP18.1■□□□□ 0.49
TARDBP-231ENST00000639599 TRIM27P14373 513 aa18.09■□□□□ 0.49
TARDBP-231ENST00000639599 FCGRTP55899 365 aa18.09■□□□□ 0.49
TARDBP-231ENST00000639599 MTX1Q13505 466 aa18.09■□□□□ 0.49
TARDBP-231ENST00000639599 C17orf99Q6UX52 265 aa18.09■□□□□ 0.49
TARDBP-231ENST00000639599 ZFPM1Q8IX07 1006 aa18.09■□□□□ 0.49
TARDBP-231ENST00000639599 SMCR8Q8TEV9 937 aaPredicted RBP18.09■□□□□ 0.49
TARDBP-231ENST00000639599 MYPNQ86TC9 1320 aa18.08■□□□□ 0.49
TARDBP-231ENST00000639599 ZBTB22O15209 634 aa18.08■□□□□ 0.48
TARDBP-231ENST00000639599 UQCRFS1P1P0C7P4 283 aa18.08■□□□□ 0.48
TARDBP-231ENST00000639599 CAP1Q01518 475 aa18.08■□□□□ 0.48
TARDBP-231ENST00000639599 MECOMQ03112 1051 aa18.08■□□□□ 0.48
TARDBP-231ENST00000639599 FTSJ3Q8IY81 847 aaKnown RBP18.08■□□□□ 0.48
TARDBP-231ENST00000639599 SPATA5Q8NB90 893 aa18.08■□□□□ 0.48
TARDBP-231ENST00000639599 TRIM47Q96LD4 638 aa18.08■□□□□ 0.48
TARDBP-231ENST00000639599 LRP2BPQ9P2M1 347 aa18.08■□□□□ 0.48
TARDBP-231ENST00000639599 MYH13Q9UKX3 1938 aa18.08■□□□□ 0.48
TARDBP-231ENST00000639599 UBXN2AP68543 259 aa18.07■□□□□ 0.48
TARDBP-231ENST00000639599 FAM163AQ96GL9 167 aaPredicted RBP18.07■□□□□ 0.48
TARDBP-231ENST00000639599 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.07■□□□□ 0.48
TARDBP-231ENST00000639599 PCDH10Q9P2E7 1040 aa18.07■□□□□ 0.48
TARDBP-231ENST00000639599 SRRDQ9UH36 339 aa18.07■□□□□ 0.48
TARDBP-231ENST00000639599 TRIM75PA6NK02 468 aa18.06■□□□□ 0.48
TARDBP-231ENST00000639599 CTNND1O60716 968 aaKnown RBP18.06■□□□□ 0.48
TARDBP-231ENST00000639599 BCAR3O75815 825 aa18.06■□□□□ 0.48
TARDBP-231ENST00000639599 MAP4K4O95819 1239 aaPredicted RBP18.06■□□□□ 0.48
TARDBP-231ENST00000639599 CYP2C8P10632 490 aa18.06■□□□□ 0.48
TARDBP-231ENST00000639599 PTPRAP18433 802 aa18.06■□□□□ 0.48
TARDBP-231ENST00000639599 TTC39AQ5SRH9 613 aa18.06■□□□□ 0.48
TARDBP-231ENST00000639599 ZKSCAN2Q63HK3 967 aa18.06■□□□□ 0.48
TARDBP-231ENST00000639599 NKX2-3Q8TAU0 364 aa18.06■□□□□ 0.48
TARDBP-231ENST00000639599 TRIM34Q9BYJ4 488 aa18.06■□□□□ 0.48
TARDBP-231ENST00000639599 HMG20BQ9P0W2 317 aa18.06■□□□□ 0.48
TARDBP-231ENST00000639599 PDE4DIPQ5VU43 2346 aa18.05■□□□□ 0.48
TARDBP-231ENST00000639599 GPR75-ASB3A0A0A6YYF3 556 aa18.05■□□□□ 0.48
TARDBP-231ENST00000639599 A0A0G2JLL6 359 aaPredicted RBP18.05■□□□□ 0.48
TARDBP-231ENST00000639599 DDTLA6NHG4 134 aaPredicted RBP18.05■□□□□ 0.48
TARDBP-231ENST00000639599 OSBPP22059 807 aa18.05■□□□□ 0.48
TARDBP-231ENST00000639599 GRK4P32298 578 aa18.05■□□□□ 0.48
TARDBP-231ENST00000639599 CCDC158Q5M9N0 1113 aa18.05■□□□□ 0.48
TARDBP-231ENST00000639599 PRRT2Q7Z6L0 340 aaPredicted RBP18.05■□□□□ 0.48
TARDBP-231ENST00000639599 DDX4Q9NQI0 724 aaKnown RBP18.05■□□□□ 0.48
TARDBP-231ENST00000639599 PNMA3Q9UL41 463 aa18.05■□□□□ 0.48
TARDBP-231ENST00000639599 PHF20L1A8MW92 1017 aa18.04■□□□□ 0.48
TARDBP-231ENST00000639599 BAG3O95817 575 aa18.04■□□□□ 0.48
TARDBP-231ENST00000639599 TEX11Q8IYF3 940 aa18.04■□□□□ 0.48
TARDBP-231ENST00000639599 PNMA6EA0A0J9YXQ4 647 aa18.03■□□□□ 0.48
TARDBP-231ENST00000639599 ARID4AP29374 1257 aaPredicted RBP18.03■□□□□ 0.48
TARDBP-231ENST00000639599 TBC1D9Q6ZT07 1266 aa18.03■□□□□ 0.48
TARDBP-231ENST00000639599 SH3BP5LQ7L8J4 393 aa18.03■□□□□ 0.48
TARDBP-231ENST00000639599 NSUN4Q96CB9 384 aaKnown RBP18.03■□□□□ 0.48
TARDBP-231ENST00000639599 OSBPL5Q9H0X9 879 aaPredicted RBP18.03■□□□□ 0.48
TARDBP-231ENST00000639599 SLC45A1Q9Y2W3 748 aa18.03■□□□□ 0.48
TARDBP-231ENST00000639599 AFG3L2Q9Y4W6 797 aa18.03■□□□□ 0.48
TARDBP-231ENST00000639599 RFX7Q2KHR2 1363 aa18.03■□□□□ 0.48
TARDBP-231ENST00000639599 ATRNL1Q5VV63 1379 aa18.03■□□□□ 0.48
TARDBP-231ENST00000639599 AK9Q5TCS8 1911 aa18.02■□□□□ 0.48
TARDBP-231ENST00000639599 TNPO2O14787 897 aaKnown RBP18.02■□□□□ 0.48
TARDBP-231ENST00000639599 PLCG2P16885 1265 aa18.02■□□□□ 0.48
TARDBP-231ENST00000639599 HNRNPUQ00839 825 aaKnown RBP eCLIP18.02■□□□□ 0.48
TARDBP-231ENST00000639599 PRKCZQ05513 592 aa18.02■□□□□ 0.48
TARDBP-231ENST00000639599 PABPC4Q13310 644 aaKnown RBP eCLIP18.02■□□□□ 0.48
TARDBP-231ENST00000639599 NAA16Q6N069 864 aaPredicted RBP18.02■□□□□ 0.48
TARDBP-231ENST00000639599 GPAT2Q6NUI2 795 aa18.02■□□□□ 0.48
TARDBP-231ENST00000639599 PI16Q6UXB8 463 aa18.02■□□□□ 0.48
TARDBP-231ENST00000639599 ITPRIPQ8IWB1 547 aa18.02■□□□□ 0.48
TARDBP-231ENST00000639599 TMEM57Q8N5G2 664 aa18.02■□□□□ 0.48
TARDBP-231ENST00000639599 SLAIN1Q8ND83 568 aa18.02■□□□□ 0.48
TARDBP-231ENST00000639599 TBC1D2Q9BYX2 928 aa18.02■□□□□ 0.48
TARDBP-231ENST00000639599 TAOK2Q9UL54 1235 aa18.02■□□□□ 0.48
TARDBP-231ENST00000639599 ADGRA2Q96PE1 1338 aa18.01■□□□□ 0.47
TARDBP-231ENST00000639599 TBC1D12O60347 775 aa18.01■□□□□ 0.47
TARDBP-231ENST00000639599 NPM3O75607 178 aaKnown RBP18.01■□□□□ 0.47
TARDBP-231ENST00000639599 BCRP11274 1271 aa18.01■□□□□ 0.47
TARDBP-231ENST00000639599 RHBDL3P58872 404 aa18.01■□□□□ 0.47
TARDBP-231ENST00000639599 MOGSQ13724 837 aa18.01■□□□□ 0.47
TARDBP-231ENST00000639599 RNF208Q9H0X6 261 aa18.01■□□□□ 0.47
TARDBP-231ENST00000639599 AS3MTQ9HBK9 375 aa18.01■□□□□ 0.47
TARDBP-231ENST00000639599 AGTPBP1Q9UPW5 1226 aa18.01■□□□□ 0.47
TARDBP-231ENST00000639599 TNNQ9UQP3 1299 aa18.01■□□□□ 0.47
TARDBP-231ENST00000639599 SURF6O75683 361 aaKnown RBP18■□□□□ 0.47
TARDBP-231ENST00000639599 MCAMP43121 646 aa18■□□□□ 0.47
TARDBP-231ENST00000639599 CRACR2BQ8N4Y2 399 aaPredicted RBP18■□□□□ 0.47
TARDBP-231ENST00000639599 COA7Q96BR5 231 aa18■□□□□ 0.47
TARDBP-231ENST00000639599 HERC5Q9UII4 1024 aaKnown RBP18■□□□□ 0.47
TARDBP-231ENST00000639599 FAM196BA6NMK8 535 aa17.99■□□□□ 0.47
TARDBP-231ENST00000639599 CCL5P13501 91 aa17.99■□□□□ 0.47
TARDBP-231ENST00000639599 CTGFP29279 349 aa17.99■□□□□ 0.47
TARDBP-231ENST00000639599 MAP3K10Q02779 954 aa17.99■□□□□ 0.47
TARDBP-231ENST00000639599 MTFR1Q15390 333 aa17.99■□□□□ 0.47
TARDBP-231ENST00000639599 TNNI3KQ59H18 835 aa17.99■□□□□ 0.47
TARDBP-231ENST00000639599 HABP4Q5JVS0 413 aaKnown RBP17.99■□□□□ 0.47
TARDBP-231ENST00000639599 CCDC84Q86UT8 332 aaPredicted RBP17.99■□□□□ 0.47
TARDBP-231ENST00000639599 DPF3Q92784 378 aa17.99■□□□□ 0.47
TARDBP-231ENST00000639599 DHX36Q9H2U1 1008 aaKnown RBP17.99■□□□□ 0.47
TARDBP-231ENST00000639599 GPR108Q9NPR9 543 aa17.99■□□□□ 0.47
TARDBP-231ENST00000639599 SNRKQ9NRH2 765 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms