RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 CCDC57Q2TAC2 916 aa13.99□□□□□ -0.17
PTP4A1-207ENST00000639568 STK31Q9BXU1 1019 aa13.99□□□□□ -0.17
PTP4A1-207ENST00000639568 TTYH1Q9H313 450 aaPredicted RBP13.99□□□□□ -0.17
PTP4A1-207ENST00000639568 IQSEC3Q9UPP2 1182 aaPredicted RBP13.99□□□□□ -0.17
PTP4A1-207ENST00000639568 PTPRAP18433 802 aa13.98□□□□□ -0.17
PTP4A1-207ENST00000639568 SHHQ15465 462 aa13.98□□□□□ -0.17
PTP4A1-207ENST00000639568 SCYL3Q8IZE3 742 aa13.98□□□□□ -0.17
PTP4A1-207ENST00000639568 IL27Q8NEV9 243 aa13.98□□□□□ -0.17
PTP4A1-207ENST00000639568 CCER1Q8TC90 406 aaPredicted RBP13.98□□□□□ -0.17
PTP4A1-207ENST00000639568 RUNDC1Q96C34 613 aa13.98□□□□□ -0.17
PTP4A1-207ENST00000639568 AGTPBP1Q9UPW5 1226 aa13.98□□□□□ -0.17
PTP4A1-207ENST00000639568 AFG3L2Q9Y4W6 797 aa13.98□□□□□ -0.17
PTP4A1-207ENST00000639568 TRIM75PA6NK02 468 aa13.97□□□□□ -0.17
PTP4A1-207ENST00000639568 GCLCP48506 637 aaPredicted RBP13.97□□□□□ -0.17
PTP4A1-207ENST00000639568 CASP7P55210 303 aa13.97□□□□□ -0.17
PTP4A1-207ENST00000639568 GNAI1P63096 354 aa13.97□□□□□ -0.17
PTP4A1-207ENST00000639568 CALD1Q05682 793 aaKnown RBP13.97□□□□□ -0.17
PTP4A1-207ENST00000639568 CAVIN4Q5BKX8 364 aa13.97□□□□□ -0.17
PTP4A1-207ENST00000639568 HHIPL2Q6UWX4 724 aa13.97□□□□□ -0.17
PTP4A1-207ENST00000639568 C8orf58Q8NAV2 365 aa13.97□□□□□ -0.17
PTP4A1-207ENST00000639568 TRIB2Q92519 343 aa13.97□□□□□ -0.17
PTP4A1-207ENST00000639568 SENP6Q9GZR1 1112 aaPredicted RBP13.97□□□□□ -0.17
PTP4A1-207ENST00000639568 GJD2Q9UKL4 321 aa13.97□□□□□ -0.17
PTP4A1-207ENST00000639568 DDX60LQ5H9U9 1706 aaKnown RBP13.96□□□□□ -0.17
PTP4A1-207ENST00000639568 CYP2B6P20813 491 aa13.96□□□□□ -0.17
PTP4A1-207ENST00000639568 MAP3K21Q5TCX8 1036 aa13.96□□□□□ -0.17
PTP4A1-207ENST00000639568 ATXN2LQ8WWM7 1075 aaKnown RBP13.96□□□□□ -0.17
PTP4A1-207ENST00000639568 ZNF594Q96JF6 807 aaPredicted RBP13.96□□□□□ -0.17
PTP4A1-207ENST00000639568 C1QTNF1Q9BXJ1 281 aa13.96□□□□□ -0.17
PTP4A1-207ENST00000639568 IFT57Q9NWB7 429 aa13.96□□□□□ -0.17
PTP4A1-207ENST00000639568 CDH23Q9H251 3354 aa13.96□□□□□ -0.17
PTP4A1-207ENST00000639568 DNAH12Q6ZR08 3092 aa13.95□□□□□ -0.18
PTP4A1-207ENST00000639568 ZNF853P0CG23 659 aa13.95□□□□□ -0.18
PTP4A1-207ENST00000639568 TRMT44Q8IYL2 757 aaKnown RBP13.95□□□□□ -0.18
PTP4A1-207ENST00000639568 ADAMTS19Q8TE59 1207 aa13.95□□□□□ -0.18
PTP4A1-207ENST00000639568 UHRF1Q96T88 793 aaPredicted RBP13.95□□□□□ -0.18
PTP4A1-207ENST00000639568 SUGT1Q9Y2Z0 365 aa13.95□□□□□ -0.18
PTP4A1-207ENST00000639568 HCN4Q9Y3Q4 1203 aa13.95□□□□□ -0.18
PTP4A1-207ENST00000639568 LRRFIP2Q9Y608 721 aaKnown RBP13.95□□□□□ -0.18
PTP4A1-207ENST00000639568 MYH3P11055 1940 aa13.94□□□□□ -0.18
PTP4A1-207ENST00000639568 MGAMO43451 1857 aa13.94□□□□□ -0.18
PTP4A1-207ENST00000639568 ZKSCAN1P17029 563 aaPredicted RBP13.94□□□□□ -0.18
PTP4A1-207ENST00000639568 ATN1P54259 1190 aaPredicted RBP13.94□□□□□ -0.18
PTP4A1-207ENST00000639568 FOXO4P98177 505 aa13.94□□□□□ -0.18
PTP4A1-207ENST00000639568 PABPC4Q13310 644 aaKnown RBP eCLIP13.94□□□□□ -0.18
PTP4A1-207ENST00000639568 C9orf50Q5SZB4 431 aa13.94□□□□□ -0.18
PTP4A1-207ENST00000639568 LMBR1LQ6UX01 489 aa13.94□□□□□ -0.18
PTP4A1-207ENST00000639568 USP38Q8NB14 1042 aa13.94□□□□□ -0.18
PTP4A1-207ENST00000639568 LINS1Q8NG48 757 aa13.94□□□□□ -0.18
PTP4A1-207ENST00000639568 ASB2Q96Q27 587 aa13.94□□□□□ -0.18
PTP4A1-207ENST00000639568 NUDT12Q9BQG2 462 aa13.94□□□□□ -0.18
PTP4A1-207ENST00000639568 XRCC5P13010 732 aaKnown RBP13.93□□□□□ -0.18
PTP4A1-207ENST00000639568 CACNB2Q08289 660 aaPredicted RBP13.93□□□□□ -0.18
PTP4A1-207ENST00000639568 PDE3AQ14432 1141 aa13.93□□□□□ -0.18
PTP4A1-207ENST00000639568 TREML2Q5T2D2 321 aa13.93□□□□□ -0.18
PTP4A1-207ENST00000639568 LHX8Q68G74 356 aa13.93□□□□□ -0.18
PTP4A1-207ENST00000639568 FBXO33Q7Z6M2 555 aa13.93□□□□□ -0.18
PTP4A1-207ENST00000639568 SOCS4Q8WXH5 440 aa13.93□□□□□ -0.18
PTP4A1-207ENST00000639568 PPM1EQ8WY54 764 aa13.93□□□□□ -0.18
PTP4A1-207ENST00000639568 ARIH1Q9Y4X5 557 aaPredicted RBP13.93□□□□□ -0.18
PTP4A1-207ENST00000639568 BDP1A6H8Y1 2624 aa13.93□□□□□ -0.18
PTP4A1-207ENST00000639568 SYNGAP1Q96PV0 1343 aa13.92□□□□□ -0.18
PTP4A1-207ENST00000639568 PHF20L1A8MW92 1017 aa13.92□□□□□ -0.18
PTP4A1-207ENST00000639568 SLC4A2P04920 1241 aa13.92□□□□□ -0.18
PTP4A1-207ENST00000639568 ZEB1P37275 1124 aaPredicted RBP13.92□□□□□ -0.18
PTP4A1-207ENST00000639568 NFIAQ12857 509 aa13.92□□□□□ -0.18
PTP4A1-207ENST00000639568 WDR43Q15061 677 aaKnown RBP eCLIP13.92□□□□□ -0.18
PTP4A1-207ENST00000639568 CDC42EP5Q6NZY7 148 aa13.92□□□□□ -0.18
PTP4A1-207ENST00000639568 CCAR1Q8IX12 1150 aaKnown RBP13.92□□□□□ -0.18
PTP4A1-207ENST00000639568 PRDM5Q9NQX1 630 aaPredicted RBP13.92□□□□□ -0.18
PTP4A1-207ENST00000639568 THEGQ9P2T0 379 aa13.92□□□□□ -0.18
PTP4A1-207ENST00000639568 ATP11BQ9Y2G3 1177 aa13.92□□□□□ -0.18
PTP4A1-207ENST00000639568 CTNND1O60716 968 aaKnown RBP13.91□□□□□ -0.18
PTP4A1-207ENST00000639568 CCND3P30281 292 aaPredicted RBP13.91□□□□□ -0.18
PTP4A1-207ENST00000639568 MRPS5P82675 430 aaKnown RBP13.91□□□□□ -0.18
PTP4A1-207ENST00000639568 GRIN2CQ14957 1233 aa13.91□□□□□ -0.18
PTP4A1-207ENST00000639568 ZSCAN29Q8IWY8 852 aaPredicted RBP13.91□□□□□ -0.18
PTP4A1-207ENST00000639568 PROCA1Q8NCQ7 364 aaPredicted RBP13.91□□□□□ -0.18
PTP4A1-207ENST00000639568 DNAAF4Q8WXU2 420 aa13.91□□□□□ -0.18
PTP4A1-207ENST00000639568 USP40Q9NVE5 1235 aa13.91□□□□□ -0.18
PTP4A1-207ENST00000639568 RTP1P59025 263 aa13.9□□□□□ -0.18
PTP4A1-207ENST00000639568 FKBP5Q13451 457 aaPredicted RBP13.9□□□□□ -0.18
PTP4A1-207ENST00000639568 G2E3Q7L622 706 aa13.9□□□□□ -0.18
PTP4A1-207ENST00000639568 TSPYL6Q8N831 410 aa13.9□□□□□ -0.18
PTP4A1-207ENST00000639568 BADQ92934 168 aa13.9□□□□□ -0.18
PTP4A1-207ENST00000639568 RNPC3Q96LT9 517 aaKnown RBP13.9□□□□□ -0.18
PTP4A1-207ENST00000639568 SPINK5Q9NQ38 1064 aaPredicted RBP13.9□□□□□ -0.18
PTP4A1-207ENST00000639568 FAM198AQ9UFP1 575 aa13.9□□□□□ -0.18
PTP4A1-207ENST00000639568 MROH5Q6ZUA9 1318 aa13.9□□□□□ -0.19
PTP4A1-207ENST00000639568 GAS2L1Q99501 681 aaPredicted RBP13.89□□□□□ -0.19
PTP4A1-207ENST00000639568 ASCC2Q9H1I8 757 aaPredicted RBP13.89□□□□□ -0.19
PTP4A1-207ENST00000639568 DAGLAQ9Y4D2 1042 aa13.89□□□□□ -0.19
PTP4A1-207ENST00000639568 RGS2P41220 211 aa13.88□□□□□ -0.19
PTP4A1-207ENST00000639568 FLIIQ13045 1269 aa13.88□□□□□ -0.19
PTP4A1-207ENST00000639568 ZFPM1Q8IX07 1006 aa13.88□□□□□ -0.19
PTP4A1-207ENST00000639568 GPRC5AQ8NFJ5 357 aa13.88□□□□□ -0.19
PTP4A1-207ENST00000639568 WDR66Q8TBY9 1149 aa13.88□□□□□ -0.19
PTP4A1-207ENST00000639568 DNM1LO00429 736 aa13.87□□□□□ -0.19
PTP4A1-207ENST00000639568 MSCO60682 206 aa13.87□□□□□ -0.19
PTP4A1-207ENST00000639568 CNGA1P29973 690 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms