RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 PDCD2Q16342 344 aaPredicted RBP12.14□□□□□ -0.47
KCNMA1-259ENST00000639406 ATL3Q6DD88 541 aa12.14□□□□□ -0.47
KCNMA1-259ENST00000639406 SUN1O94901 812 aa12.13□□□□□ -0.47
KCNMA1-259ENST00000639406 HAND2P61296 217 aa12.13□□□□□ -0.47
KCNMA1-259ENST00000639406 APOBRQ0VD83 1088 aa12.13□□□□□ -0.47
KCNMA1-259ENST00000639406 ST13P4Q8IZP2 240 aaPredicted RBP12.13□□□□□ -0.47
KCNMA1-259ENST00000639406 SLF1Q9BQI6 1058 aa12.13□□□□□ -0.47
KCNMA1-259ENST00000639406 HDAC9Q9UKV0 1011 aa12.13□□□□□ -0.47
KCNMA1-259ENST00000639406 ERICH3Q5RHP9 1530 aa12.13□□□□□ -0.47
KCNMA1-259ENST00000639406 KCTD16Q68DU8 428 aa12.13□□□□□ -0.47
KCNMA1-259ENST00000639406 USP26Q9BXU7 913 aa12.13□□□□□ -0.47
KCNMA1-259ENST00000639406 EVI5O60447 810 aa12.13□□□□□ -0.47
KCNMA1-259ENST00000639406 TTLL12Q14166 644 aaPredicted RBP12.13□□□□□ -0.47
KCNMA1-259ENST00000639406 SLMAPQ14BN4 828 aa12.13□□□□□ -0.47
KCNMA1-259ENST00000639406 TMEM132EQ6IEE7 984 aa12.13□□□□□ -0.47
KCNMA1-259ENST00000639406 DTNBP1Q96EV8 351 aa12.13□□□□□ -0.47
KCNMA1-259ENST00000639406 CSRNP2Q9H175 543 aa12.13□□□□□ -0.47
KCNMA1-259ENST00000639406 PAIP2BQ9ULR5 123 aaKnown RBP12.13□□□□□ -0.47
KCNMA1-259ENST00000639406 PPP2R2CQ9Y2T4 447 aa12.13□□□□□ -0.47
KCNMA1-259ENST00000639406 F6X3S4 739 aa12.13□□□□□ -0.47
KCNMA1-259ENST00000639406 ETF1P62495 437 aaKnown RBP12.13□□□□□ -0.47
KCNMA1-259ENST00000639406 ESRRGP62508 458 aa12.13□□□□□ -0.47
KCNMA1-259ENST00000639406 SEPT8Q92599 483 aa12.13□□□□□ -0.47
KCNMA1-259ENST00000639406 CLCN6P51797 869 aa12.13□□□□□ -0.47
KCNMA1-259ENST00000639406 GNPTABQ3T906 1256 aa12.13□□□□□ -0.47
KCNMA1-259ENST00000639406 CCDC14Q49A88 953 aa12.13□□□□□ -0.47
KCNMA1-259ENST00000639406 AMOTQ4VCS5 1084 aa12.13□□□□□ -0.47
KCNMA1-259ENST00000639406 GAS2L3Q86XJ1 694 aa12.13□□□□□ -0.47
KCNMA1-259ENST00000639406 LEO1Q8WVC0 666 aaPredicted RBP12.13□□□□□ -0.47
KCNMA1-259ENST00000639406 MKNK2Q9HBH9 465 aa12.13□□□□□ -0.47
KCNMA1-259ENST00000639406 ZNF287Q9HBT7 754 aa12.13□□□□□ -0.47
KCNMA1-259ENST00000639406 hCG_2014768A0A024R1R8 64 aa12.12□□□□□ -0.47
KCNMA1-259ENST00000639406 INPP1P49441 399 aa12.12□□□□□ -0.47
KCNMA1-259ENST00000639406 PDE1AP54750 535 aa12.12□□□□□ -0.47
KCNMA1-259ENST00000639406 FAM133BQ5BKY9 247 aaKnown RBP12.12□□□□□ -0.47
KCNMA1-259ENST00000639406 CAPRIN2Q6IMN6 1127 aaKnown RBP12.12□□□□□ -0.47
KCNMA1-259ENST00000639406 THUMPD2Q9BTF0 503 aaKnown RBP12.12□□□□□ -0.47
KCNMA1-259ENST00000639406 NOC4LQ9BVI4 516 aaKnown RBP12.12□□□□□ -0.47
KCNMA1-259ENST00000639406 ATG3Q9NT62 314 aa12.12□□□□□ -0.47
KCNMA1-259ENST00000639406 ZNF711Q9Y462 761 aa12.12□□□□□ -0.47
KCNMA1-259ENST00000639406 LMTK3Q96Q04 1460 aa12.12□□□□□ -0.47
KCNMA1-259ENST00000639406 CHMP2AO43633 222 aa12.12□□□□□ -0.47
KCNMA1-259ENST00000639406 BRAPQ7Z569 592 aa12.12□□□□□ -0.47
KCNMA1-259ENST00000639406 RUSC2Q8N2Y8 1516 aa12.12□□□□□ -0.47
KCNMA1-259ENST00000639406 PTPRCP08575 1304 aa12.12□□□□□ -0.47
KCNMA1-259ENST00000639406 NUTM2GQ5VZR2 741 aa12.12□□□□□ -0.47
KCNMA1-259ENST00000639406 HIBCHQ6NVY1 386 aaPredicted RBP12.12□□□□□ -0.47
KCNMA1-259ENST00000639406 ANLNQ9NQW6 1124 aa12.12□□□□□ -0.47
KCNMA1-259ENST00000639406 FLOT1O75955 427 aa12.12□□□□□ -0.47
KCNMA1-259ENST00000639406 MYCNP04198 464 aaPredicted RBP12.12□□□□□ -0.47
KCNMA1-259ENST00000639406 XPO4Q9C0E2 1151 aaKnown RBP12.12□□□□□ -0.47
KCNMA1-259ENST00000639406 CCDC68Q9H2F9 335 aa12.12□□□□□ -0.47
KCNMA1-259ENST00000639406 LRRC9Q6ZRR7 1453 aa12.11□□□□□ -0.47
KCNMA1-259ENST00000639406 ANKRD65E5RJM6 399 aa12.11□□□□□ -0.47
KCNMA1-259ENST00000639406 ANKRD20A4Q4UJ75 823 aa12.11□□□□□ -0.47
KCNMA1-259ENST00000639406 ANKRD20A8PQ5CZ79 823 aa12.11□□□□□ -0.47
KCNMA1-259ENST00000639406 ANKRD20A2Q5SQ80 823 aa12.11□□□□□ -0.47
KCNMA1-259ENST00000639406 ANKRD20A1Q5TYW2 823 aa12.11□□□□□ -0.47
KCNMA1-259ENST00000639406 KLHL29Q96CT2 875 aa12.11□□□□□ -0.47
KCNMA1-259ENST00000639406 NBPF7P0C2Y1 421 aaPredicted RBP12.11□□□□□ -0.47
KCNMA1-259ENST00000639406 ITIH3Q06033 890 aa12.11□□□□□ -0.47
KCNMA1-259ENST00000639406 NUDCD3Q8IVD9 361 aa12.11□□□□□ -0.47
KCNMA1-259ENST00000639406 UBL4BQ8N7F7 174 aa12.11□□□□□ -0.47
KCNMA1-259ENST00000639406 RAB17Q9H0T7 212 aa12.11□□□□□ -0.47
KCNMA1-259ENST00000639406 PFDN4Q9NQP4 134 aa12.11□□□□□ -0.47
KCNMA1-259ENST00000639406 PARP2Q9UGN5 583 aa12.11□□□□□ -0.47
KCNMA1-259ENST00000639406 TBC1D8BQ0IIM8 1120 aa12.11□□□□□ -0.47
KCNMA1-259ENST00000639406 NME8Q8N427 588 aa12.11□□□□□ -0.47
KCNMA1-259ENST00000639406 MIS18AQ9NYP9 233 aa12.11□□□□□ -0.47
KCNMA1-259ENST00000639406 CCDC13Q8IYE1 715 aa12.11□□□□□ -0.47
KCNMA1-259ENST00000639406 CCT6BQ92526 530 aa12.11□□□□□ -0.47
KCNMA1-259ENST00000639406 PPP1R13BQ96KQ4 1090 aa12.11□□□□□ -0.47
KCNMA1-259ENST00000639406 NUP58Q9BVL2 599 aa12.11□□□□□ -0.47
KCNMA1-259ENST00000639406 ASIC3Q9UHC3 531 aa12.11□□□□□ -0.47
KCNMA1-259ENST00000639406 CRCPO75575 148 aa12.11□□□□□ -0.47
KCNMA1-259ENST00000639406 KRT10P13645 584 aa12.11□□□□□ -0.47
KCNMA1-259ENST00000639406 CCDC93Q567U6 631 aa12.11□□□□□ -0.47
KCNMA1-259ENST00000639406 METTL24Q5JXM2 366 aa12.11□□□□□ -0.47
KCNMA1-259ENST00000639406 CTTNBP2NLQ9P2B4 639 aa12.11□□□□□ -0.47
KCNMA1-259ENST00000639406 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.11□□□□□ -0.47
KCNMA1-259ENST00000639406 FYCO1Q9BQS8 1478 aa12.1□□□□□ -0.47
KCNMA1-259ENST00000639406 SYNRGQ9UMZ2 1314 aa12.1□□□□□ -0.47
KCNMA1-259ENST00000639406 ZBTB43O43298 467 aa12.1□□□□□ -0.47
KCNMA1-259ENST00000639406 MAN1A2O60476 641 aa12.1□□□□□ -0.47
KCNMA1-259ENST00000639406 RWDD2BP57060 319 aa12.1□□□□□ -0.47
KCNMA1-259ENST00000639406 RAPGEF1Q13905 1077 aa12.1□□□□□ -0.47
KCNMA1-259ENST00000639406 GEN1Q17RS7 908 aa12.1□□□□□ -0.47
KCNMA1-259ENST00000639406 VWA3BQ502W6 1294 aa12.1□□□□□ -0.47
KCNMA1-259ENST00000639406 AFAP1L2Q8N4X5 818 aa12.1□□□□□ -0.47
KCNMA1-259ENST00000639406 PDZD8Q8NEN9 1154 aa12.1□□□□□ -0.47
KCNMA1-259ENST00000639406 KIF21BO75037 1637 aa12.1□□□□□ -0.47
KCNMA1-259ENST00000639406 ADKP55263 362 aaKnown RBP12.1□□□□□ -0.47
KCNMA1-259ENST00000639406 C16orf87Q6PH81 154 aa12.1□□□□□ -0.47
KCNMA1-259ENST00000639406 SRGAP1Q7Z6B7 1085 aa12.1□□□□□ -0.47
KCNMA1-259ENST00000639406 CUL5Q93034 780 aa12.1□□□□□ -0.47
KCNMA1-259ENST00000639406 CLEC11AQ9Y240 323 aa12.1□□□□□ -0.47
KCNMA1-259ENST00000639406 URB2Q14146 1524 aaKnown RBP12.1□□□□□ -0.47
KCNMA1-259ENST00000639406 BTBD11A6QL63 1104 aa12.1□□□□□ -0.47
KCNMA1-259ENST00000639406 SPOPO43791 374 aa12.1□□□□□ -0.47
KCNMA1-259ENST00000639406 TRPA1O75762 1119 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms