RNA–Protein interactions for RNA: ENST00000637613.1

CHD2-228, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-228ENST00000637613 NFE2L2Q16236 605 aa5.5□□□□□ -1.53
CHD2-228ENST00000637613 TTC39BQ5VTQ0 682 aaPredicted RBP5.5□□□□□ -1.53
CHD2-228ENST00000637613 RELL1Q8IUW5 271 aa5.5□□□□□ -1.53
CHD2-228ENST00000637613 CCNJLQ8IV13 435 aa5.5□□□□□ -1.53
CHD2-228ENST00000637613 CKAP2LQ8IYA6 745 aa5.5□□□□□ -1.53
CHD2-228ENST00000637613 PHC3Q8NDX5 983 aa5.5□□□□□ -1.53
CHD2-228ENST00000637613 ZNF296Q8WUU4 475 aaPredicted RBP5.5□□□□□ -1.53
CHD2-228ENST00000637613 TRIM56Q9BRZ2 755 aaKnown RBP5.5□□□□□ -1.53
CHD2-228ENST00000637613 EHD4Q9H223 541 aa5.5□□□□□ -1.53
CHD2-228ENST00000637613 ZNF408Q9H9D4 720 aa5.5□□□□□ -1.53
CHD2-228ENST00000637613 STRIP2Q9ULQ0 834 aa5.5□□□□□ -1.53
CHD2-228ENST00000637613 TTF2Q9UNY4 1162 aaKnown RBP5.5□□□□□ -1.53
CHD2-228ENST00000637613 FOSL1P15407 271 aa5.49□□□□□ -1.53
CHD2-228ENST00000637613 NASPP49321 788 aaPredicted RBP5.49□□□□□ -1.53
CHD2-228ENST00000637613 NRLP54845 237 aa5.49□□□□□ -1.53
CHD2-228ENST00000637613 CCDC85BQ15834 202 aaPredicted RBP5.49□□□□□ -1.53
CHD2-228ENST00000637613 GDF6Q6KF10 455 aaPredicted RBP5.49□□□□□ -1.53
CHD2-228ENST00000637613 FBXL19Q6PCT2 694 aa5.49□□□□□ -1.53
CHD2-228ENST00000637613 BEND4Q6ZU67 534 aa5.49□□□□□ -1.53
CHD2-228ENST00000637613 ACAD11Q709F0 780 aa5.49□□□□□ -1.53
CHD2-228ENST00000637613 PLD4Q96BZ4 506 aa5.49□□□□□ -1.53
CHD2-228ENST00000637613 SPACA7Q96KW9 195 aa5.49□□□□□ -1.53
CHD2-228ENST00000637613 MUC3BQ9H195 1237 aa5.49□□□□□ -1.53
CHD2-228ENST00000637613 GINM1Q9NU53 330 aa5.49□□□□□ -1.53
CHD2-228ENST00000637613 LEMD3Q9Y2U8 911 aa5.49□□□□□ -1.53
CHD2-228ENST00000637613 B8ZZF3 427 aa5.48□□□□□ -1.53
CHD2-228ENST00000637613 MMP20O60882 483 aa5.48□□□□□ -1.53
CHD2-228ENST00000637613 ITPKAP23677 461 aa5.48□□□□□ -1.53
CHD2-228ENST00000637613 HSD3B2P26439 372 aa5.48□□□□□ -1.53
CHD2-228ENST00000637613 SOX18P35713 384 aa5.48□□□□□ -1.53
CHD2-228ENST00000637613 FCGRTP55899 365 aa5.48□□□□□ -1.53
CHD2-228ENST00000637613 BMS1Q14692 1282 aaKnown RBP5.48□□□□□ -1.53
CHD2-228ENST00000637613 CPSF6Q16630 551 aaKnown RBP eCLIP5.48□□□□□ -1.53
CHD2-228ENST00000637613 HFE2Q6ZVN8 426 aa5.48□□□□□ -1.53
CHD2-228ENST00000637613 LRP10Q7Z4F1 713 aa5.48□□□□□ -1.53
CHD2-228ENST00000637613 AGBL5Q8NDL9 886 aa5.48□□□□□ -1.53
CHD2-228ENST00000637613 GIMAP7Q8NHV1 300 aa5.48□□□□□ -1.53
CHD2-228ENST00000637613 ZFYVE1Q9HBF4 777 aa5.48□□□□□ -1.53
CHD2-228ENST00000637613 SIRPGQ9P1W8 387 aa5.48□□□□□ -1.53
CHD2-228ENST00000637613 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.48□□□□□ -1.53
CHD2-228ENST00000637613 MINDY4BA8MYZ0 360 aa5.47□□□□□ -1.53
CHD2-228ENST00000637613 ENPP3O14638 875 aa5.47□□□□□ -1.53
CHD2-228ENST00000637613 SASH3O75995 380 aa5.47□□□□□ -1.53
CHD2-228ENST00000637613 TARSP26639 723 aaKnown RBP5.47□□□□□ -1.53
CHD2-228ENST00000637613 GBP2P32456 591 aaPredicted RBP5.47□□□□□ -1.53
CHD2-228ENST00000637613 ETFBP38117 255 aa5.47□□□□□ -1.53
CHD2-228ENST00000637613 LMNB2Q03252 620 aa5.47□□□□□ -1.53
CHD2-228ENST00000637613 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.47□□□□□ -1.53
CHD2-228ENST00000637613 SLITRK4Q8IW52 837 aa5.47□□□□□ -1.53
CHD2-228ENST00000637613 CACTIN-AS1Q8N1I8 211 aa5.47□□□□□ -1.53
CHD2-228ENST00000637613 GALNT11Q8NCW6 608 aa5.47□□□□□ -1.53
CHD2-228ENST00000637613 MFSD14AQ96MC6 490 aa5.47□□□□□ -1.53
CHD2-228ENST00000637613 KCNF1Q9H3M0 494 aa5.47□□□□□ -1.53
CHD2-228ENST00000637613 LIN7BQ9HAP6 207 aa5.47□□□□□ -1.53
CHD2-228ENST00000637613 ATG3Q9NT62 314 aa5.47□□□□□ -1.53
CHD2-228ENST00000637613 KANSL3Q9P2N6 904 aa5.47□□□□□ -1.53
CHD2-228ENST00000637613 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.47□□□□□ -1.53
CHD2-228ENST00000637613 EFR3BQ9Y2G0 817 aa5.47□□□□□ -1.53
CHD2-228ENST00000637613 NFKBIEO00221 500 aa5.46□□□□□ -1.54
CHD2-228ENST00000637613 SSBP05455 408 aaKnown RBP eCLIP5.46□□□□□ -1.54
CHD2-228ENST00000637613 RARAP10276 462 aa5.46□□□□□ -1.54
CHD2-228ENST00000637613 BMP3P12645 472 aa5.46□□□□□ -1.54
CHD2-228ENST00000637613 CD68P34810 354 aaPredicted RBP5.46□□□□□ -1.54
CHD2-228ENST00000637613 BUD31P41223 144 aaPredicted RBP5.46□□□□□ -1.54
CHD2-228ENST00000637613 LIG3P49916 1009 aa5.46□□□□□ -1.54
CHD2-228ENST00000637613 RAB33AQ14088 237 aa5.46□□□□□ -1.54
CHD2-228ENST00000637613 COL13A1Q5TAT6 717 aaPredicted RBP5.46□□□□□ -1.54
CHD2-228ENST00000637613 AGMOQ6ZNB7 445 aa5.46□□□□□ -1.54
CHD2-228ENST00000637613 KRT25Q7Z3Z0 450 aa5.46□□□□□ -1.54
CHD2-228ENST00000637613 KSR1Q8IVT5 923 aa5.46□□□□□ -1.54
CHD2-228ENST00000637613 CEP120Q8N960 986 aa5.46□□□□□ -1.54
CHD2-228ENST00000637613 MRFAP1L1Q96HT8 127 aa5.46□□□□□ -1.54
CHD2-228ENST00000637613 ZKSCAN3Q9BRR0 538 aa5.46□□□□□ -1.54
CHD2-228ENST00000637613 LRRC3Q9BY71 257 aa5.46□□□□□ -1.54
CHD2-228ENST00000637613 BRINP2Q9C0B6 783 aa5.46□□□□□ -1.54
CHD2-228ENST00000637613 CEP44Q9C0F1 390 aa5.46□□□□□ -1.54
CHD2-228ENST00000637613 BHLHE41Q9C0J9 482 aaPredicted RBP5.46□□□□□ -1.54
CHD2-228ENST00000637613 TLR7Q9NYK1 1049 aaKnown RBP5.46□□□□□ -1.54
CHD2-228ENST00000637613 SUPT16HQ9Y5B9 1047 aaKnown RBP5.46□□□□□ -1.54
CHD2-228ENST00000637613 MRPL42Q9Y6G3 142 aaKnown RBP5.46□□□□□ -1.54
CHD2-228ENST00000637613 ROBO2Q9HCK4 1378 aa5.45□□□□□ -1.54
CHD2-228ENST00000637613 ENC1O14682 589 aa5.45□□□□□ -1.54
CHD2-228ENST00000637613 PF4P02776 101 aa5.45□□□□□ -1.54
CHD2-228ENST00000637613 GRIA4P48058 902 aa5.45□□□□□ -1.54
CHD2-228ENST00000637613 RPS26P62854 115 aaKnown RBP5.45□□□□□ -1.54
CHD2-228ENST00000637613 CAMK2GQ13555 558 aaPredicted RBP5.45□□□□□ -1.54
CHD2-228ENST00000637613 RASA3Q14644 834 aa5.45□□□□□ -1.54
CHD2-228ENST00000637613 RPS26P11Q5JNZ5 115 aaPredicted RBP5.45□□□□□ -1.54
CHD2-228ENST00000637613 PCNX4Q63HM2 1172 aa5.45□□□□□ -1.54
CHD2-228ENST00000637613 DTHD1Q6ZMT9 781 aa5.45□□□□□ -1.54
CHD2-228ENST00000637613 KIAA1211Q6ZU35 1233 aa5.45□□□□□ -1.54
CHD2-228ENST00000637613 ANKS3Q6ZW76 656 aa5.45□□□□□ -1.54
CHD2-228ENST00000637613 CCDC84Q86UT8 332 aaPredicted RBP5.45□□□□□ -1.54
CHD2-228ENST00000637613 GPATCH3Q96I76 525 aa5.45□□□□□ -1.54
CHD2-228ENST00000637613 SHDQ96IW2 340 aa5.45□□□□□ -1.54
CHD2-228ENST00000637613 RNPC3Q96LT9 517 aaKnown RBP5.45□□□□□ -1.54
CHD2-228ENST00000637613 NECAB3Q96P71 396 aaPredicted RBP5.45□□□□□ -1.54
CHD2-228ENST00000637613 DZANK1Q9NVP4 752 aa5.45□□□□□ -1.54
CHD2-228ENST00000637613 BSDC1Q9NW68 430 aaPredicted RBP5.45□□□□□ -1.54
CHD2-228ENST00000637613 PRKAG3Q9UGI9 489 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 231.1 ms