RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 WBP1LQ9NX94 342 aa20.64■□□□□ 0.89
LIN28B-202ENST00000635857 TTC41PQ6P2S7 1318 aa20.63■□□□□ 0.89
LIN28B-202ENST00000635857 CA12O43570 354 aa20.63■□□□□ 0.89
LIN28B-202ENST00000635857 NPM3O75607 178 aaKnown RBP20.63■□□□□ 0.89
LIN28B-202ENST00000635857 MAP3K9P80192 1104 aa20.63■□□□□ 0.89
LIN28B-202ENST00000635857 SLC9C2Q5TAH2 1124 aa20.63■□□□□ 0.89
LIN28B-202ENST00000635857 ZSCAN25Q6NSZ9 544 aa20.63■□□□□ 0.89
LIN28B-202ENST00000635857 SH3RF3Q8TEJ3 882 aaPredicted RBP20.63■□□□□ 0.89
LIN28B-202ENST00000635857 ZBTB48P10074 688 aaPredicted RBP20.62■□□□□ 0.89
LIN28B-202ENST00000635857 CTCFP49711 727 aaPredicted RBP20.62■□□□□ 0.89
LIN28B-202ENST00000635857 PPP4CP60510 307 aa20.62■□□□□ 0.89
LIN28B-202ENST00000635857 IRX6P78412 446 aaPredicted RBP20.62■□□□□ 0.89
LIN28B-202ENST00000635857 SREBF2Q12772 1141 aa20.62■□□□□ 0.89
LIN28B-202ENST00000635857 MKRN3Q13064 507 aaKnown RBP20.62■□□□□ 0.89
LIN28B-202ENST00000635857 MIGA2Q7L4E1 593 aa20.62■□□□□ 0.89
LIN28B-202ENST00000635857 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.62■□□□□ 0.89
LIN28B-202ENST00000635857 DDX4Q9NQI0 724 aaKnown RBP20.62■□□□□ 0.89
LIN28B-202ENST00000635857 ADGRA1Q86SQ6 560 aa20.61■□□□□ 0.89
LIN28B-202ENST00000635857 MIGA1Q8NAN2 632 aa20.61■□□□□ 0.89
LIN28B-202ENST00000635857 CLMNQ96JQ2 1002 aa20.61■□□□□ 0.89
LIN28B-202ENST00000635857 OSBPL5Q9H0X9 879 aaPredicted RBP20.61■□□□□ 0.89
LIN28B-202ENST00000635857 ELP3Q9H9T3 547 aa20.61■□□□□ 0.89
LIN28B-202ENST00000635857 COL2A1P02458 1487 aaPredicted RBP20.61■□□□□ 0.89
LIN28B-202ENST00000635857 MYH7P12883 1935 aa20.61■□□□□ 0.89
LIN28B-202ENST00000635857 PDE6AP16499 860 aa20.6■□□□□ 0.89
LIN28B-202ENST00000635857 MX1P20591 662 aa20.6■□□□□ 0.89
LIN28B-202ENST00000635857 USP5P45974 858 aa20.6■□□□□ 0.89
LIN28B-202ENST00000635857 SPRYD7Q5W111 196 aa20.6■□□□□ 0.89
LIN28B-202ENST00000635857 TGFBRAP1Q8WUH2 860 aa20.6■□□□□ 0.89
LIN28B-202ENST00000635857 WNK4Q96J92 1243 aa20.6■□□□□ 0.89
LIN28B-202ENST00000635857 TRIM34Q9BYJ4 488 aa20.6■□□□□ 0.89
LIN28B-202ENST00000635857 DHX36Q9H2U1 1008 aaKnown RBP20.6■□□□□ 0.89
LIN28B-202ENST00000635857 FOCADQ5VW36 1801 aa20.6■□□□□ 0.89
LIN28B-202ENST00000635857 ZNF532Q9HCE3 1301 aa20.59■□□□□ 0.89
LIN28B-202ENST00000635857 MAGEB6P1A0A0J9YX57 407 aa20.59■□□□□ 0.89
LIN28B-202ENST00000635857 FOXN1O15353 648 aa20.59■□□□□ 0.89
LIN28B-202ENST00000635857 GLRX3O76003 335 aaKnown RBP20.59■□□□□ 0.89
LIN28B-202ENST00000635857 VGLL4Q14135 290 aa20.59■□□□□ 0.89
LIN28B-202ENST00000635857 LRRFIP1Q32MZ4 808 aaKnown RBP20.59■□□□□ 0.89
LIN28B-202ENST00000635857 ZFPM1Q8IX07 1006 aa20.59■□□□□ 0.89
LIN28B-202ENST00000635857 EDC3Q96F86 508 aaKnown RBP20.59■□□□□ 0.89
LIN28B-202ENST00000635857 ZIC5Q96T25 663 aa20.59■□□□□ 0.89
LIN28B-202ENST00000635857 ATRNL1Q5VV63 1379 aa20.59■□□□□ 0.89
LIN28B-202ENST00000635857 CDK5RAP2Q96SN8 1893 aa20.58■□□□□ 0.89
LIN28B-202ENST00000635857 DDTLA6NHG4 134 aaPredicted RBP20.58■□□□□ 0.89
LIN28B-202ENST00000635857 MANSC4A6NHS7 340 aaPredicted RBP20.58■□□□□ 0.89
LIN28B-202ENST00000635857 HLA-DOAP06340 250 aa20.58■□□□□ 0.89
LIN28B-202ENST00000635857 DYNLL1P63167 89 aaKnown RBP20.58■□□□□ 0.89
LIN28B-202ENST00000635857 TSHZ3Q63HK5 1081 aa20.58■□□□□ 0.89
LIN28B-202ENST00000635857 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.58■□□□□ 0.89
LIN28B-202ENST00000635857 MAPKAPK5Q8IW41 473 aa20.58■□□□□ 0.89
LIN28B-202ENST00000635857 OPTNQ96CV9 577 aa20.58■□□□□ 0.89
LIN28B-202ENST00000635857 FLT1P17948 1338 aa20.57■□□□□ 0.88
LIN28B-202ENST00000635857 INHBEP58166 350 aa20.57■□□□□ 0.88
LIN28B-202ENST00000635857 B4GALNT3Q6L9W6 998 aa20.57■□□□□ 0.88
LIN28B-202ENST00000635857 ZKSCAN4Q969J2 545 aaPredicted RBP20.57■□□□□ 0.88
LIN28B-202ENST00000635857 CRNKL1Q9BZJ0 848 aaKnown RBP20.57■□□□□ 0.88
LIN28B-202ENST00000635857 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.57■□□□□ 0.88
LIN28B-202ENST00000635857 PCNTO95613 3336 aa20.57■□□□□ 0.88
LIN28B-202ENST00000635857 ADD2P35612 726 aa20.56■□□□□ 0.88
LIN28B-202ENST00000635857 SMC5Q8IY18 1101 aa20.56■□□□□ 0.88
LIN28B-202ENST00000635857 OTUD5Q96G74 571 aa20.56■□□□□ 0.88
LIN28B-202ENST00000635857 SAGE1Q9NXZ1 904 aa20.56■□□□□ 0.88
LIN28B-202ENST00000635857 OTUD7BQ6GQQ9 843 aa20.55■□□□□ 0.88
LIN28B-202ENST00000635857 SH3BP5LQ7L8J4 393 aa20.55■□□□□ 0.88
LIN28B-202ENST00000635857 ERO1BQ86YB8 467 aa20.55■□□□□ 0.88
LIN28B-202ENST00000635857 CRACR2BQ8N4Y2 399 aaPredicted RBP20.55■□□□□ 0.88
LIN28B-202ENST00000635857 LNPKQ9C0E8 428 aa20.55■□□□□ 0.88
LIN28B-202ENST00000635857 PICK1Q9NRD5 415 aa20.55■□□□□ 0.88
LIN28B-202ENST00000635857 PI4KBQ9UBF8 816 aa20.55■□□□□ 0.88
LIN28B-202ENST00000635857 HERC5Q9UII4 1024 aaKnown RBP20.55■□□□□ 0.88
LIN28B-202ENST00000635857 SPDYE5A6NIY4 337 aa20.54■□□□□ 0.88
LIN28B-202ENST00000635857 INPP5BP32019 993 aa20.54■□□□□ 0.88
LIN28B-202ENST00000635857 UBE3CQ15386 1083 aa20.54■□□□□ 0.88
LIN28B-202ENST00000635857 KBTBD3Q8NAB2 608 aa20.54■□□□□ 0.88
LIN28B-202ENST00000635857 DDRGK1Q96HY6 314 aa20.54■□□□□ 0.88
LIN28B-202ENST00000635857 SNCAIPQ9Y6H5 919 aa20.54■□□□□ 0.88
LIN28B-202ENST00000635857 MYH1P12882 1939 aa20.54■□□□□ 0.88
LIN28B-202ENST00000635857 NAV1Q8NEY1 1877 aa20.54■□□□□ 0.88
LIN28B-202ENST00000635857 TBC1D12O60347 775 aa20.53■□□□□ 0.88
LIN28B-202ENST00000635857 TRPA1O75762 1119 aa20.53■□□□□ 0.88
LIN28B-202ENST00000635857 ALDH1A1P00352 501 aa20.53■□□□□ 0.88
LIN28B-202ENST00000635857 IGHDP01880 384 aa20.53■□□□□ 0.88
LIN28B-202ENST00000635857 ZFYP08048 801 aaPredicted RBP20.53■□□□□ 0.88
LIN28B-202ENST00000635857 HSPA8P11142 646 aaKnown RBP20.53■□□□□ 0.88
LIN28B-202ENST00000635857 GTF2A2P52657 109 aa20.53■□□□□ 0.88
LIN28B-202ENST00000635857 LBX1P52954 281 aa20.53■□□□□ 0.88
LIN28B-202ENST00000635857 OTUD7AQ8TE49 926 aaPredicted RBP20.53■□□□□ 0.88
LIN28B-202ENST00000635857 RIOK1Q9BRS2 568 aaKnown RBP20.53■□□□□ 0.88
LIN28B-202ENST00000635857 FSD1Q9BTV5 496 aa20.53■□□□□ 0.88
LIN28B-202ENST00000635857 SAP30BPQ9UHR5 308 aaKnown RBP20.53■□□□□ 0.88
LIN28B-202ENST00000635857 ZNF112Q9UJU3 913 aa20.53■□□□□ 0.88
LIN28B-202ENST00000635857 LAMB1P07942 1786 aa20.53■□□□□ 0.88
LIN28B-202ENST00000635857 DOCK1Q14185 1865 aa20.52■□□□□ 0.88
LIN28B-202ENST00000635857 TCRBV5S4A2TA0A5A2 114 aa20.52■□□□□ 0.88
LIN28B-202ENST00000635857 TM4SF4P48230 202 aa20.52■□□□□ 0.88
LIN28B-202ENST00000635857 PPATQ06203 517 aa20.52■□□□□ 0.88
LIN28B-202ENST00000635857 NOL9Q5SY16 702 aaKnown RBP20.52■□□□□ 0.88
LIN28B-202ENST00000635857 TTC6Q86TZ1 520 aa20.52■□□□□ 0.88
LIN28B-202ENST00000635857 CHD1LQ86WJ1 897 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms