RNA–Protein interactions for RNA: ENST00000626874.2

CHD2-208, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 7,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-208ENST00000626874 MIS18AQ9NYP9 233 aa7.7□□□□□ -1.18
CHD2-208ENST00000626874 CASQ2O14958 399 aaPredicted RBP7.7□□□□□ -1.18
CHD2-208ENST00000626874 GNA14O95837 355 aa7.7□□□□□ -1.18
CHD2-208ENST00000626874 XPAP23025 273 aaPredicted RBP7.7□□□□□ -1.18
CHD2-208ENST00000626874 SYCE1Q8N0S2 351 aa7.7□□□□□ -1.18
CHD2-208ENST00000626874 ZC3H15Q8WU90 426 aaKnown RBP7.7□□□□□ -1.18
CHD2-208ENST00000626874 NUP58Q9BVL2 599 aa7.7□□□□□ -1.18
CHD2-208ENST00000626874 IBTKQ9P2D0 1353 aaPredicted RBP7.7□□□□□ -1.18
CHD2-208ENST00000626874 KDM5BQ9UGL1 1544 aa7.7□□□□□ -1.18
CHD2-208ENST00000626874 MGEA5O60502 916 aa7.7□□□□□ -1.18
CHD2-208ENST00000626874 PUM3Q15397 648 aaKnown RBP7.7□□□□□ -1.18
CHD2-208ENST00000626874 DLGAP5Q15398 846 aa7.7□□□□□ -1.18
CHD2-208ENST00000626874 BMP2KLQ5H9B9 411 aa7.7□□□□□ -1.18
CHD2-208ENST00000626874 DONSONQ9NYP3 566 aa7.7□□□□□ -1.18
CHD2-208ENST00000626874 ACEP12821 1306 aa7.7□□□□□ -1.18
CHD2-208ENST00000626874 UFL1O94874 794 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 GNG11P61952 73 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 PPP2R5EQ16537 467 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 VCX3AQ9NNX9 186 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 KDM3AQ9Y4C1 1321 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 CCDC160A6NGH7 325 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 DNAJC21Q5F1R6 531 aaKnown RBP7.69□□□□□ -1.18
CHD2-208ENST00000626874 KRT26Q7Z3Y9 468 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 TICAM2Q86XR7 235 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 FLT4P35916 1363 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 GIGYF1O75420 1035 aaPredicted RBP7.69□□□□□ -1.18
CHD2-208ENST00000626874 KRT3P12035 628 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 C1orf228Q6PIY5 440 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 NME9Q86XW9 330 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 MAGEB6Q8N7X4 407 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 LEO1Q8WVC0 666 aaPredicted RBP7.69□□□□□ -1.18
CHD2-208ENST00000626874 PTPDC1A2A3K4 754 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 I3L4J1 428 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 GJC1P36383 396 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 EAPPQ56P03 285 aaPredicted RBP7.69□□□□□ -1.18
CHD2-208ENST00000626874 ZNF772Q68DY9 489 aaPredicted RBP7.69□□□□□ -1.18
CHD2-208ENST00000626874 PPP1R2P3Q6NXS1 205 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 TMEM87BQ96K49 555 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 CCDC68Q9H2F9 335 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 ANKFY1Q9P2R3 1169 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 ZBTB21Q9ULJ3 1066 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 ZFYVE9O95405 1425 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 TMEM110-MUSTN1A8MSY1 372 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 SPOPO43791 374 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 ZNF365Q70YC5 407 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 SDCCAG8Q86SQ7 713 aaPredicted RBP7.69□□□□□ -1.18
CHD2-208ENST00000626874 XAGE3Q8WTP9 111 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 EDEM3Q9BZQ6 932 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 LMCD1Q9NZU5 365 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 UTP11Q9Y3A2 253 aaKnown RBP7.69□□□□□ -1.18
CHD2-208ENST00000626874 RABGAP1Q9Y3P9 1069 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 DCUN1D2Q6PH85 259 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 PALM2Q8IXS6 379 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 PROCA1Q8NCQ7 364 aaPredicted RBP7.69□□□□□ -1.18
CHD2-208ENST00000626874 LINS1Q8NG48 757 aa7.69□□□□□ -1.18
CHD2-208ENST00000626874 CFAP74Q9C0B2 1584 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 RNF113AO15541 343 aaKnown RBP7.68□□□□□ -1.18
CHD2-208ENST00000626874 N4BP1O75113 896 aaKnown RBP7.68□□□□□ -1.18
CHD2-208ENST00000626874 HEXIM1O94992 359 aaKnown RBP7.68□□□□□ -1.18
CHD2-208ENST00000626874 HIBADHP31937 336 aaKnown RBP7.68□□□□□ -1.18
CHD2-208ENST00000626874 HAND2P61296 217 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 CACNA2D3Q8IZS8 1091 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 FAM81BQ96LP2 452 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 PARP2Q9UGN5 583 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 SLC12A6Q9UHW9 1150 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 LMNB1P20700 586 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 TNFAIP3P21580 790 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 SLC1A4P43007 532 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 RPS6KC1Q96S38 1066 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 LACTBP83111 547 aaPredicted RBP7.68□□□□□ -1.18
CHD2-208ENST00000626874 SSH1Q8WYL5 1049 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 CNKSR1Q969H4 720 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 NT5C3AQ9H0P0 336 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 HELLSQ9NRZ9 838 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 SERPINA10Q9UK55 444 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 DNM3Q9UQ16 869 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 TNNQ9UQP3 1299 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 LUC7L2Q9Y383 392 aaKnown RBP7.68□□□□□ -1.18
CHD2-208ENST00000626874 YTHDC2Q9H6S0 1430 aaKnown RBP7.68□□□□□ -1.18
CHD2-208ENST00000626874 OSBPP22059 807 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 HSPA1LP34931 641 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 AFMP43652 599 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 SH3BGRP55822 239 aaPredicted RBP7.68□□□□□ -1.18
CHD2-208ENST00000626874 DCAF17Q5H9S7 520 aaPredicted RBP7.68□□□□□ -1.18
CHD2-208ENST00000626874 FAM160B1Q5W0V3 765 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 TMC4Q7Z404 712 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 EFCAB13Q8IY85 973 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 P3H4Q92791 437 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.68□□□□□ -1.185e-7■■■■□ 23.5
CHD2-208ENST00000626874 INTS8Q75QN2 995 aaKnown RBP7.68□□□□□ -1.18
CHD2-208ENST00000626874 AP5M1Q9H0R1 490 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 SNRKQ9NRH2 765 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 SEPT10Q9P0V9 454 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 TSKSQ9UJT2 592 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 A0A1B0GVL5 298 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 UBXN1Q04323 297 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 CCDC121Q6ZUS5 278 aa7.68□□□□□ -1.18
CHD2-208ENST00000626874 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.68□□□□□ -1.18
CHD2-208ENST00000626874 SEC62Q99442 399 aaKnown RBP7.68□□□□□ -1.18
CHD2-208ENST00000626874 PLEKHG3A1L390 1219 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms