RNA–Protein interactions for RNA: ENST00000621813.4

TRA2A-212, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-212ENST00000621813 ZNF804BA4D1E1 1349 aa20.29■□□□□ 0.84
TRA2A-212ENST00000621813 MBD4O95243 580 aa20.28■□□□□ 0.84
TRA2A-212ENST00000621813 LIG1P18858 919 aa20.28■□□□□ 0.84
TRA2A-212ENST00000621813 BCAMP50895 628 aa20.28■□□□□ 0.84
TRA2A-212ENST00000621813 ERFEQ4G0M1 354 aa20.28■□□□□ 0.84
TRA2A-212ENST00000621813 NOM1Q5C9Z4 860 aaKnown RBP20.28■□□□□ 0.84
TRA2A-212ENST00000621813 IFNL3Q8IZI9 196 aa20.28■□□□□ 0.84
TRA2A-212ENST00000621813 CCDC112Q8NEF3 446 aa20.28■□□□□ 0.84
TRA2A-212ENST00000621813 BICD2Q8TD16 824 aa20.28■□□□□ 0.84
TRA2A-212ENST00000621813 NACAP1Q9BZK3 213 aa20.28■□□□□ 0.84
TRA2A-212ENST00000621813 RCOR1Q9UKL0 485 aa20.28■□□□□ 0.84
TRA2A-212ENST00000621813 FDPSP14324 419 aaKnown RBP20.27■□□□□ 0.84
TRA2A-212ENST00000621813 ADD1P35611 737 aaKnown RBP20.27■□□□□ 0.84
TRA2A-212ENST00000621813 TNMDQ9H2S6 317 aa20.27■□□□□ 0.84
TRA2A-212ENST00000621813 GPHNQ9NQX3 736 aaPredicted RBP20.27■□□□□ 0.84
TRA2A-212ENST00000621813 DACT1Q9NYF0 836 aa20.27■□□□□ 0.84
TRA2A-212ENST00000621813 DONSONQ9NYP3 566 aa20.27■□□□□ 0.84
TRA2A-212ENST00000621813 NARFQ9UHQ1 456 aa20.27■□□□□ 0.84
TRA2A-212ENST00000621813 SH2B2O14492 632 aaPredicted RBP20.27■□□□□ 0.84
TRA2A-212ENST00000621813 RPS6KA4O75676 772 aa20.27■□□□□ 0.84
TRA2A-212ENST00000621813 CDKL5O76039 1030 aa20.27■□□□□ 0.84
TRA2A-212ENST00000621813 RBM43Q6ZSC3 357 aaKnown RBP20.27■□□□□ 0.84
TRA2A-212ENST00000621813 EGFL6Q8IUX8 553 aa20.27■□□□□ 0.84
TRA2A-212ENST00000621813 C17orf53Q8N3J3 647 aaPredicted RBP20.27■□□□□ 0.84
TRA2A-212ENST00000621813 PGBD1Q96JS3 809 aa20.27■□□□□ 0.84
TRA2A-212ENST00000621813 SNAP23O00161 211 aa20.26■□□□□ 0.83
TRA2A-212ENST00000621813 CPLX2Q6PUV4 134 aaKnown RBP20.26■□□□□ 0.83
TRA2A-212ENST00000621813 FBXO41Q8TF61 875 aa20.26■□□□□ 0.83
TRA2A-212ENST00000621813 C8orf76Q96K31 380 aa20.26■□□□□ 0.83
TRA2A-212ENST00000621813 KRT23Q9C075 422 aa20.26■□□□□ 0.83
TRA2A-212ENST00000621813 CLSTN2Q9H4D0 955 aa20.26■□□□□ 0.83
TRA2A-212ENST00000621813 LRP2BPQ9P2M1 347 aa20.26■□□□□ 0.83
TRA2A-212ENST00000621813 ORC3Q9UBD5 711 aaPredicted RBP20.25■□□□□ 0.83
TRA2A-212ENST00000621813 LY75O60449 1722 aa20.25■□□□□ 0.83
TRA2A-212ENST00000621813 TAF1LQ8IZX4 1826 aa20.25■□□□□ 0.83
TRA2A-212ENST00000621813 CAVIN4Q5BKX8 364 aa20.25■□□□□ 0.83
TRA2A-212ENST00000621813 MEX3CQ5U5Q3 659 aaKnown RBP20.25■□□□□ 0.83
TRA2A-212ENST00000621813 CYB5R4Q7L1T6 521 aa20.25■□□□□ 0.83
TRA2A-212ENST00000621813 SGMS1Q86VZ5 419 aa20.25■□□□□ 0.83
TRA2A-212ENST00000621813 FBXO18Q8NFZ0 1043 aa20.25■□□□□ 0.83
TRA2A-212ENST00000621813 TRERF1Q96PN7 1200 aa20.25■□□□□ 0.83
TRA2A-212ENST00000621813 MTA3Q9BTC8 594 aa20.25■□□□□ 0.83
TRA2A-212ENST00000621813 EPB41L4AQ9HCS5 686 aaPredicted RBP20.25■□□□□ 0.83
TRA2A-212ENST00000621813 COL4A1P02462 1669 aa20.25■□□□□ 0.83
TRA2A-212ENST00000621813 B4E1Z4 1266 aa20.24■□□□□ 0.83
TRA2A-212ENST00000621813 LIFRP42702 1097 aa20.24■□□□□ 0.83
TRA2A-212ENST00000621813 METAP2P50579 478 aaKnown RBP eCLIP20.24■□□□□ 0.83
TRA2A-212ENST00000621813 GPS2Q13227 327 aa20.24■□□□□ 0.83
TRA2A-212ENST00000621813 CT47A1Q5JQC4 288 aaPredicted RBP20.24■□□□□ 0.83
TRA2A-212ENST00000621813 BRAPQ7Z569 592 aa20.24■□□□□ 0.83
TRA2A-212ENST00000621813 CCDC91Q7Z6B0 441 aa20.24■□□□□ 0.83
TRA2A-212ENST00000621813 ARMT1Q9H993 441 aa20.24■□□□□ 0.83
TRA2A-212ENST00000621813 MYH13Q9UKX3 1938 aa20.24■□□□□ 0.83
TRA2A-212ENST00000621813 TAF1P21675 1872 aa20.24■□□□□ 0.83
TRA2A-212ENST00000621813 GSG1L2A8MUP6 293 aa20.23■□□□□ 0.83
TRA2A-212ENST00000621813 TPM4P67936 248 aa20.23■□□□□ 0.83
TRA2A-212ENST00000621813 AKNAD1Q5T1N1 836 aa20.23■□□□□ 0.83
TRA2A-212ENST00000621813 TBC1D9BQ66K14 1250 aa20.23■□□□□ 0.83
TRA2A-212ENST00000621813 SETDB2Q96T68 719 aa20.23■□□□□ 0.83
TRA2A-212ENST00000621813 NEDD4P46934 1319 aa20.23■□□□□ 0.83
TRA2A-212ENST00000621813 MYO1CO00159 1063 aa20.23■□□□□ 0.83
TRA2A-212ENST00000621813 KDM4AO75164 1064 aa20.23■□□□□ 0.83
TRA2A-212ENST00000621813 FOSBP53539 338 aa20.23■□□□□ 0.83
TRA2A-212ENST00000621813 APOA5Q6Q788 366 aa20.23■□□□□ 0.83
TRA2A-212ENST00000621813 IGDCC4Q8TDY8 1250 aa20.23■□□□□ 0.83
TRA2A-212ENST00000621813 USP21Q9UK80 565 aa20.23■□□□□ 0.83
TRA2A-212ENST00000621813 SLC4A4Q9Y6R1 1079 aa20.23■□□□□ 0.83
TRA2A-212ENST00000621813 SEMA3EO15041 775 aa20.22■□□□□ 0.83
TRA2A-212ENST00000621813 CTAGE5O15320 804 aa20.22■□□□□ 0.83
TRA2A-212ENST00000621813 ZPR1O75312 459 aa20.22■□□□□ 0.83
TRA2A-212ENST00000621813 MFSD6Q6ZSS7 791 aa20.22■□□□□ 0.83
TRA2A-212ENST00000621813 STAG1Q8WVM7 1258 aa20.22■□□□□ 0.83
TRA2A-212ENST00000621813 NLRP3Q96P20 1036 aa20.22■□□□□ 0.83
TRA2A-212ENST00000621813 USP28Q96RU2 1077 aa20.22■□□□□ 0.83
TRA2A-212ENST00000621813 RNF41Q9H4P4 317 aaPredicted RBP20.22■□□□□ 0.83
TRA2A-212ENST00000621813 RTEL1Q9NZ71 1219 aa20.22■□□□□ 0.83
TRA2A-212ENST00000621813 DENND2AQ9ULE3 1009 aa20.22■□□□□ 0.83
TRA2A-212ENST00000621813 MINPP1Q9UNW1 487 aa20.22■□□□□ 0.83
TRA2A-212ENST00000621813 NR1I2O75469 434 aa20.21■□□□□ 0.83
TRA2A-212ENST00000621813 CAVIN2O95810 425 aa20.21■□□□□ 0.83
TRA2A-212ENST00000621813 TDO2P48775 406 aa20.21■□□□□ 0.83
TRA2A-212ENST00000621813 FAM200AQ8TCP9 573 aa20.21■□□□□ 0.83
TRA2A-212ENST00000621813 JRKLQ9Y4A0 524 aa20.21■□□□□ 0.83
TRA2A-212ENST00000621813 ZBTB43O43298 467 aa20.21■□□□□ 0.83
TRA2A-212ENST00000621813 GUCY1B3Q02153 619 aa20.21■□□□□ 0.83
TRA2A-212ENST00000621813 TYRO3Q06418 890 aa20.21■□□□□ 0.83
TRA2A-212ENST00000621813 SART3Q15020 963 aaKnown RBP20.21■□□□□ 0.83
TRA2A-212ENST00000621813 CAMK4Q16566 473 aa20.21■□□□□ 0.83
TRA2A-212ENST00000621813 KMT5BQ4FZB7 885 aa20.21■□□□□ 0.83
TRA2A-212ENST00000621813 TMEM67Q5HYA8 995 aa20.21■□□□□ 0.83
TRA2A-212ENST00000621813 ILDR1Q86SU0 546 aaPredicted RBP20.21■□□□□ 0.83
TRA2A-212ENST00000621813 LCORLQ8N3X6 602 aa20.21■□□□□ 0.83
TRA2A-212ENST00000621813 DEF6Q9H4E7 631 aa20.21■□□□□ 0.83
TRA2A-212ENST00000621813 LY9Q9HBG7 655 aa20.21■□□□□ 0.83
TRA2A-212ENST00000621813 RAI14Q9P0K7 980 aa20.21■□□□□ 0.83
TRA2A-212ENST00000621813 RTCBQ9Y3I0 505 aaKnown RBP20.21■□□□□ 0.83
TRA2A-212ENST00000621813 V9GYY5 206 aaPredicted RBP20.21■□□□□ 0.83
TRA2A-212ENST00000621813 NID2Q14112 1375 aa20.21■□□□□ 0.83
TRA2A-212ENST00000621813 CACNA1SQ13698 1873 aa20.2■□□□□ 0.82
TRA2A-212ENST00000621813 PDS5AQ29RF7 1337 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms