RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 SMARCC2Q8TAQ2 1214 aa11.61□□□□□ -0.55
VTA1-205ENST00000620996 ZNF384Q8TF68 577 aa11.61□□□□□ -0.55
VTA1-205ENST00000620996 RIOK1Q9BRS2 568 aaKnown RBP11.61□□□□□ -0.55
VTA1-205ENST00000620996 USP17L12C9JPN9 530 aa11.61□□□□□ -0.55
VTA1-205ENST00000620996 USP17L21D6R901 530 aa11.61□□□□□ -0.55
VTA1-205ENST00000620996 RNF214Q8ND24 703 aa11.61□□□□□ -0.55
VTA1-205ENST00000620996 TMEM87BQ96K49 555 aa11.61□□□□□ -0.55
VTA1-205ENST00000620996 GJB4Q9NTQ9 266 aa11.61□□□□□ -0.55
VTA1-205ENST00000620996 TACC3Q9Y6A5 838 aa11.61□□□□□ -0.55
VTA1-205ENST00000620996 CASZ1Q86V15 1759 aa11.6□□□□□ -0.55
VTA1-205ENST00000620996 F8W031 263 aaPredicted RBP11.6□□□□□ -0.55
VTA1-205ENST00000620996 ATP2B4P23634 1241 aa11.6□□□□□ -0.55
VTA1-205ENST00000620996 WDR66Q8TBY9 1149 aa11.6□□□□□ -0.55
VTA1-205ENST00000620996 BICD2Q8TD16 824 aa11.6□□□□□ -0.55
VTA1-205ENST00000620996 HPS5Q9UPZ3 1129 aa11.6□□□□□ -0.55
VTA1-205ENST00000620996 BBOX1O75936 387 aa11.6□□□□□ -0.55
VTA1-205ENST00000620996 APOA5Q6Q788 366 aa11.6□□□□□ -0.55
VTA1-205ENST00000620996 MCM9Q9NXL9 1143 aa11.6□□□□□ -0.55
VTA1-205ENST00000620996 UBR3Q6ZT12 1888 aa11.6□□□□□ -0.55
VTA1-205ENST00000620996 PLSCR1O15162 318 aa11.59□□□□□ -0.55
VTA1-205ENST00000620996 CYP2D6P10635 497 aa11.59□□□□□ -0.55
VTA1-205ENST00000620996 EN1Q05925 392 aaPredicted RBP11.59□□□□□ -0.55
VTA1-205ENST00000620996 CRY2Q49AN0 593 aa11.59□□□□□ -0.55
VTA1-205ENST00000620996 TTC6Q86TZ1 520 aa11.59□□□□□ -0.55
VTA1-205ENST00000620996 STAG1Q8WVM7 1258 aa11.59□□□□□ -0.55
VTA1-205ENST00000620996 ANP32BQ92688 251 aaKnown RBP11.59□□□□□ -0.55
VTA1-205ENST00000620996 ESR2Q92731 530 aa11.59□□□□□ -0.55
VTA1-205ENST00000620996 LY9Q9HBG7 655 aa11.59□□□□□ -0.55
VTA1-205ENST00000620996 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.59□□□□□ -0.55
VTA1-205ENST00000620996 EVX2Q03828 476 aa11.59□□□□□ -0.55
VTA1-205ENST00000620996 MAPK8IP2Q13387 824 aaPredicted RBP11.59□□□□□ -0.55
VTA1-205ENST00000620996 GRIK5Q16478 980 aa11.59□□□□□ -0.55
VTA1-205ENST00000620996 CMTR1Q8N1G2 835 aaKnown RBP11.59□□□□□ -0.55
VTA1-205ENST00000620996 SLC26A6Q9BXS9 759 aa11.59□□□□□ -0.55
VTA1-205ENST00000620996 FTOQ9C0B1 505 aaKnown RBP eCLIP11.59□□□□□ -0.55
VTA1-205ENST00000620996 CD209Q9NNX6 404 aa11.59□□□□□ -0.55
VTA1-205ENST00000620996 POLLQ9UGP5 575 aa11.59□□□□□ -0.55
VTA1-205ENST00000620996 ZMYM6O95789 1325 aa11.59□□□□□ -0.55
VTA1-205ENST00000620996 POLR3DP05423 398 aaPredicted RBP11.59□□□□□ -0.55
VTA1-205ENST00000620996 HMGB2P26583 209 aaKnown RBP11.59□□□□□ -0.55
VTA1-205ENST00000620996 NASPP49321 788 aaPredicted RBP11.59□□□□□ -0.55
VTA1-205ENST00000620996 RESTQ13127 1097 aa11.59□□□□□ -0.55
VTA1-205ENST00000620996 TBC1D16Q8TBP0 767 aa11.59□□□□□ -0.55
VTA1-205ENST00000620996 IGDCC4Q8TDY8 1250 aa11.59□□□□□ -0.55
VTA1-205ENST00000620996 AIFM3Q96NN9 605 aa11.59□□□□□ -0.55
VTA1-205ENST00000620996 VGLL3A8MV65 326 aa11.58□□□□□ -0.56
VTA1-205ENST00000620996 CDKL5O76039 1030 aa11.58□□□□□ -0.56
VTA1-205ENST00000620996 FDPSP14324 419 aaKnown RBP11.58□□□□□ -0.56
VTA1-205ENST00000620996 AKT1S1Q96B36 256 aa11.58□□□□□ -0.56
VTA1-205ENST00000620996 SCAND2PQ9GZW5 306 aaPredicted RBP11.58□□□□□ -0.56
VTA1-205ENST00000620996 ZSCAN16Q9H4T2 348 aaPredicted RBP11.58□□□□□ -0.56
VTA1-205ENST00000620996 SAP30BPQ9UHR5 308 aaKnown RBP11.58□□□□□ -0.56
VTA1-205ENST00000620996 MTMR7Q9Y216 660 aa11.58□□□□□ -0.56
VTA1-205ENST00000620996 TCHHQ07283 1943 aa11.58□□□□□ -0.56
VTA1-205ENST00000620996 WDR19Q8NEZ3 1342 aa11.58□□□□□ -0.56
VTA1-205ENST00000620996 CDC27P30260 824 aa11.58□□□□□ -0.56
VTA1-205ENST00000620996 IARSP41252 1262 aaKnown RBP11.58□□□□□ -0.56
VTA1-205ENST00000620996 EZH2Q15910 746 aaKnown RBP11.58□□□□□ -0.56
VTA1-205ENST00000620996 DOK7Q18PE1 504 aa11.58□□□□□ -0.56
VTA1-205ENST00000620996 FAM47AQ5JRC9 791 aa11.58□□□□□ -0.56
VTA1-205ENST00000620996 MFSD14BQ5SR56 506 aa11.58□□□□□ -0.56
VTA1-205ENST00000620996 CTR9Q6PD62 1173 aa11.58□□□□□ -0.56
VTA1-205ENST00000620996 ALG1Q9BT22 464 aa11.58□□□□□ -0.56
VTA1-205ENST00000620996 TNKSO95271 1327 aa11.58□□□□□ -0.56
VTA1-205ENST00000620996 SLC3A2P08195 630 aaKnown RBP11.57□□□□□ -0.56
VTA1-205ENST00000620996 USP17L8P0C7I0 530 aa11.57□□□□□ -0.56
VTA1-205ENST00000620996 GTF2IP78347 998 aa11.57□□□□□ -0.56
VTA1-205ENST00000620996 TRIM29Q14134 588 aa11.57□□□□□ -0.56
VTA1-205ENST00000620996 POTEAQ6S8J7 498 aa11.57□□□□□ -0.56
VTA1-205ENST00000620996 TMEM87AQ8NBN3 555 aa11.57□□□□□ -0.56
VTA1-205ENST00000620996 TDRD7Q8NHU6 1098 aaKnown RBP11.57□□□□□ -0.56
VTA1-205ENST00000620996 SH3RF3Q8TEJ3 882 aaPredicted RBP11.57□□□□□ -0.56
VTA1-205ENST00000620996 BRIP1Q9BX63 1249 aa11.57□□□□□ -0.56
VTA1-205ENST00000620996 BAG3O95817 575 aa11.57□□□□□ -0.56
VTA1-205ENST00000620996 ZNF445P59923 1031 aa11.57□□□□□ -0.56
VTA1-205ENST00000620996 GSTO1P78417 241 aa11.57□□□□□ -0.56
VTA1-205ENST00000620996 CAMK4Q16566 473 aa11.57□□□□□ -0.56
VTA1-205ENST00000620996 RTN1Q16799 776 aa11.57□□□□□ -0.56
VTA1-205ENST00000620996 CCDC183Q5T5S1 534 aa11.57□□□□□ -0.56
VTA1-205ENST00000620996 DPP8Q6V1X1 898 aaPredicted RBP11.57□□□□□ -0.56
VTA1-205ENST00000620996 MAPKAPK5Q8IW41 473 aa11.57□□□□□ -0.56
VTA1-205ENST00000620996 FLAD1Q8NFF5 587 aa11.57□□□□□ -0.56
VTA1-205ENST00000620996 TGFBRAP1Q8WUH2 860 aa11.57□□□□□ -0.56
VTA1-205ENST00000620996 LEO1Q8WVC0 666 aaPredicted RBP11.57□□□□□ -0.56
VTA1-205ENST00000620996 ZC3H12CQ9C0D7 883 aaKnown RBP11.57□□□□□ -0.56
VTA1-205ENST00000620996 DCP1AQ9NPI6 582 aaPredicted RBP11.57□□□□□ -0.56
VTA1-205ENST00000620996 CFAP45Q9UL16 551 aa11.57□□□□□ -0.56
VTA1-205ENST00000620996 DOCK2Q92608 1830 aa11.57□□□□□ -0.56
VTA1-205ENST00000620996 AMOTL1Q8IY63 956 aa11.57□□□□□ -0.56
VTA1-205ENST00000620996 CRAMP1Q96RY5 1269 aa11.57□□□□□ -0.56
VTA1-205ENST00000620996 PDE6BP35913 854 aa11.56□□□□□ -0.56
VTA1-205ENST00000620996 EVCP57679 992 aa11.56□□□□□ -0.56
VTA1-205ENST00000620996 IFIT1BQ5T764 474 aaKnown RBP11.56□□□□□ -0.56
VTA1-205ENST00000620996 LRSAM1Q6UWE0 723 aa11.56□□□□□ -0.56
VTA1-205ENST00000620996 IQCA1Q86XH1 822 aa11.56□□□□□ -0.56
VTA1-205ENST00000620996 C2CD5Q86YS7 1000 aa11.56□□□□□ -0.56
VTA1-205ENST00000620996 FBXL16Q8N461 479 aa11.56□□□□□ -0.56
VTA1-205ENST00000620996 MPNDQ8N594 471 aa11.56□□□□□ -0.56
VTA1-205ENST00000620996 RBSNQ9H1K0 784 aa11.56□□□□□ -0.56
VTA1-205ENST00000620996 ISY1Q9ULR0 285 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms