RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 CCDC24Q8N4L8 307 aa18.31■□□□□ 0.52
NR1H3-235ENST00000616973 CNBD1Q8NA66 436 aa18.31■□□□□ 0.52
NR1H3-235ENST00000616973 GRAPLQ8TC17 118 aaPredicted RBP18.31■□□□□ 0.52
NR1H3-235ENST00000616973 SDR42E1Q8WUS8 393 aa18.31■□□□□ 0.52
NR1H3-235ENST00000616973 ALG1Q9BT22 464 aa18.31■□□□□ 0.52
NR1H3-235ENST00000616973 FTOQ9C0B1 505 aaKnown RBP eCLIP18.31■□□□□ 0.52
NR1H3-235ENST00000616973 ERICH2A1L162 156 aa18.31■□□□□ 0.52
NR1H3-235ENST00000616973 NPHP1O15259 732 aa18.31■□□□□ 0.52
NR1H3-235ENST00000616973 CTAGE5O15320 804 aa18.31■□□□□ 0.52
NR1H3-235ENST00000616973 IARSP41252 1262 aaKnown RBP18.31■□□□□ 0.52
NR1H3-235ENST00000616973 KIF23Q02241 960 aaPredicted RBP18.31■□□□□ 0.52
NR1H3-235ENST00000616973 WTAPQ15007 396 aa18.31■□□□□ 0.52
NR1H3-235ENST00000616973 SLC27A3Q5K4L6 730 aa18.31■□□□□ 0.52
NR1H3-235ENST00000616973 MYSM1Q5VVJ2 828 aa18.31■□□□□ 0.52
NR1H3-235ENST00000616973 CCDC39Q9UFE4 941 aa18.31■□□□□ 0.52
NR1H3-235ENST00000616973 LEMD3Q9Y2U8 911 aa18.31■□□□□ 0.52
NR1H3-235ENST00000616973 FGRP09769 529 aa18.3■□□□□ 0.52
NR1H3-235ENST00000616973 TYRO3Q06418 890 aa18.3■□□□□ 0.52
NR1H3-235ENST00000616973 CAMK4Q16566 473 aa18.3■□□□□ 0.52
NR1H3-235ENST00000616973 RRP12Q5JTH9 1297 aaKnown RBP18.3■□□□□ 0.52
NR1H3-235ENST00000616973 CCAR1Q8IX12 1150 aaKnown RBP18.3■□□□□ 0.52
NR1H3-235ENST00000616973 TFCP2L1Q9NZI6 479 aa18.3■□□□□ 0.52
NR1H3-235ENST00000616973 MRVI1Q9Y6F6 885 aa18.3■□□□□ 0.52
NR1H3-235ENST00000616973 A0A1W2PQ27 194 aa18.29■□□□□ 0.52
NR1H3-235ENST00000616973 A0A1W2PQ64 194 aa18.29■□□□□ 0.52
NR1H3-235ENST00000616973 A0A1W2PQD8 194 aa18.29■□□□□ 0.52
NR1H3-235ENST00000616973 RANBP6O60518 1105 aaKnown RBP18.29■□□□□ 0.52
NR1H3-235ENST00000616973 IFNAR1P17181 557 aa18.29■□□□□ 0.52
NR1H3-235ENST00000616973 RXRAP19793 462 aa18.29■□□□□ 0.52
NR1H3-235ENST00000616973 DYNLL1P63167 89 aaKnown RBP18.29■□□□□ 0.52
NR1H3-235ENST00000616973 MECOMQ03112 1051 aa18.29■□□□□ 0.52
NR1H3-235ENST00000616973 ADALQ6DHV7 355 aa18.29■□□□□ 0.52
NR1H3-235ENST00000616973 LINC00301Q8NCQ3 95 aa18.29■□□□□ 0.52
NR1H3-235ENST00000616973 KCNG4Q8TDN1 519 aa18.29■□□□□ 0.52
NR1H3-235ENST00000616973 ESR2Q92731 530 aa18.29■□□□□ 0.52
NR1H3-235ENST00000616973 TOMM22Q9NS69 142 aa18.29■□□□□ 0.52
NR1H3-235ENST00000616973 NOL7Q9UMY1 257 aaKnown RBP18.29■□□□□ 0.52
NR1H3-235ENST00000616973 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.29■□□□□ 0.52
NR1H3-235ENST00000616973 FMNL1O95466 1100 aaPredicted RBP18.29■□□□□ 0.52
NR1H3-235ENST00000616973 SSRP1Q08945 709 aaKnown RBP18.29■□□□□ 0.52
NR1H3-235ENST00000616973 PPP2R5BQ15173 497 aa18.29■□□□□ 0.52
NR1H3-235ENST00000616973 SPTY2D1Q68D10 685 aaPredicted RBP18.29■□□□□ 0.52
NR1H3-235ENST00000616973 C15orf52Q6ZUT6 534 aaKnown RBP18.29■□□□□ 0.52
NR1H3-235ENST00000616973 FAM200AQ8TCP9 573 aa18.29■□□□□ 0.52
NR1H3-235ENST00000616973 CCDC196A0A1B0GTZ2 297 aa18.28■□□□□ 0.52
NR1H3-235ENST00000616973 MINDY4BA8MYZ0 360 aa18.28■□□□□ 0.52
NR1H3-235ENST00000616973 KIF28PB7ZC32 967 aa18.28■□□□□ 0.52
NR1H3-235ENST00000616973 FAM160A1Q05DH4 1040 aa18.28■□□□□ 0.52
NR1H3-235ENST00000616973 SEC23AQ15436 765 aa18.28■□□□□ 0.52
NR1H3-235ENST00000616973 KRT40Q6A162 431 aa18.28■□□□□ 0.52
NR1H3-235ENST00000616973 CCDC73Q6ZRK6 1079 aa18.28■□□□□ 0.52
NR1H3-235ENST00000616973 ENGASEQ8NFI3 743 aa18.28■□□□□ 0.52
NR1H3-235ENST00000616973 WASF1Q92558 559 aa18.28■□□□□ 0.52
NR1H3-235ENST00000616973 POLR3DP05423 398 aaPredicted RBP18.27■□□□□ 0.52
NR1H3-235ENST00000616973 HMGB2P26583 209 aaKnown RBP18.27■□□□□ 0.52
NR1H3-235ENST00000616973 ME1P48163 572 aa18.27■□□□□ 0.52
NR1H3-235ENST00000616973 SNW1Q13573 536 aaKnown RBP18.27■□□□□ 0.52
NR1H3-235ENST00000616973 RTN1Q16799 776 aa18.27■□□□□ 0.52
NR1H3-235ENST00000616973 PRR5LQ6MZQ0 368 aa18.27■□□□□ 0.52
NR1H3-235ENST00000616973 PHKBQ93100 1093 aa18.27■□□□□ 0.52
NR1H3-235ENST00000616973 UBAC1Q9BSL1 405 aa18.27■□□□□ 0.52
NR1H3-235ENST00000616973 MYL10Q9BUA6 226 aa18.27■□□□□ 0.52
NR1H3-235ENST00000616973 QTRT2Q9H974 415 aaKnown RBP18.27■□□□□ 0.52
NR1H3-235ENST00000616973 GJB4Q9NTQ9 266 aa18.27■□□□□ 0.52
NR1H3-235ENST00000616973 PCDHA7Q9UN72 937 aa18.27■□□□□ 0.52
NR1H3-235ENST00000616973 XDHP47989 1333 aa18.27■□□□□ 0.52
NR1H3-235ENST00000616973 CAVIN2O95810 425 aa18.27■□□□□ 0.51
NR1H3-235ENST00000616973 STK38Q15208 465 aa18.27■□□□□ 0.51
NR1H3-235ENST00000616973 CTR9Q6PD62 1173 aa18.27■□□□□ 0.51
NR1H3-235ENST00000616973 TXNRD3Q86VQ6 643 aa18.27■□□□□ 0.51
NR1H3-235ENST00000616973 CCDC144CPQ8IYA2 1237 aa18.27■□□□□ 0.51
NR1H3-235ENST00000616973 CKAP2LQ8IYA6 745 aa18.27■□□□□ 0.51
NR1H3-235ENST00000616973 CRNKL1Q9BZJ0 848 aaKnown RBP18.27■□□□□ 0.51
NR1H3-235ENST00000616973 GOLPH3LQ9H4A5 285 aa18.27■□□□□ 0.51
NR1H3-235ENST00000616973 ATP8A2Q9NTI2 1148 aa18.27■□□□□ 0.51
NR1H3-235ENST00000616973 USP25Q9UHP3 1055 aa18.27■□□□□ 0.51
NR1H3-235ENST00000616973 CLIC4Q9Y696 253 aa18.27■□□□□ 0.51
NR1H3-235ENST00000616973 GYS1P13807 737 aa18.26■□□□□ 0.51
NR1H3-235ENST00000616973 U2AF2P26368 475 aaKnown RBP eCLIP18.26■□□□□ 0.51
NR1H3-235ENST00000616973 TRIM29Q14134 588 aa18.26■□□□□ 0.51
NR1H3-235ENST00000616973 CRY2Q49AN0 593 aa18.26■□□□□ 0.51
NR1H3-235ENST00000616973 ANO1Q5XXA6 986 aa18.26■□□□□ 0.51
NR1H3-235ENST00000616973 SASS6Q6UVJ0 657 aa18.26■□□□□ 0.51
NR1H3-235ENST00000616973 MRPS27Q92552 414 aaKnown RBP18.26■□□□□ 0.51
NR1H3-235ENST00000616973 AIFM3Q96NN9 605 aa18.26■□□□□ 0.51
NR1H3-235ENST00000616973 ZKSCAN3Q9BRR0 538 aa18.26■□□□□ 0.51
NR1H3-235ENST00000616973 SPTLC2O15270 562 aa18.25■□□□□ 0.51
NR1H3-235ENST00000616973 MSNP26038 577 aaKnown RBP18.25■□□□□ 0.51
NR1H3-235ENST00000616973 CHAF1AQ13111 956 aaPredicted RBP18.25■□□□□ 0.51
NR1H3-235ENST00000616973 ZNF654Q8IZM8 581 aa18.25■□□□□ 0.51
NR1H3-235ENST00000616973 FSIP1Q8NA03 581 aa18.25■□□□□ 0.51
NR1H3-235ENST00000616973 TDRD7Q8NHU6 1098 aaKnown RBP18.25■□□□□ 0.51
NR1H3-235ENST00000616973 WDR66Q8TBY9 1149 aa18.25■□□□□ 0.51
NR1H3-235ENST00000616973 ANKIB1Q9P2G1 1089 aa18.25■□□□□ 0.51
NR1H3-235ENST00000616973 ADCY5O95622 1261 aa18.25■□□□□ 0.51
NR1H3-235ENST00000616973 PRDX5P30044 214 aa18.25■□□□□ 0.51
NR1H3-235ENST00000616973 ST5P78524 1137 aa18.25■□□□□ 0.51
NR1H3-235ENST00000616973 SBK1Q52WX2 424 aa18.25■□□□□ 0.51
NR1H3-235ENST00000616973 NBPF11Q86T75 865 aa18.25■□□□□ 0.51
NR1H3-235ENST00000616973 TRIM22Q8IYM9 498 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms