RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 NWD1Q149M9 1564 aa7.2□□□□□ -1.26
SMAD4-212ENST00000591126 CBFA2T2O43439 604 aa7.2□□□□□ -1.26
SMAD4-212ENST00000591126 ANXA1P04083 346 aa7.2□□□□□ -1.26
SMAD4-212ENST00000591126 ATP2B1P20020 1258 aa7.2□□□□□ -1.26
SMAD4-212ENST00000591126 GTF2A2P52657 109 aa7.2□□□□□ -1.26
SMAD4-212ENST00000591126 MAP2K1Q02750 393 aaPredicted RBP7.2□□□□□ -1.26
SMAD4-212ENST00000591126 TFCP2Q12800 502 aa7.2□□□□□ -1.26
SMAD4-212ENST00000591126 MB21D1Q8N884 522 aa7.2□□□□□ -1.26
SMAD4-212ENST00000591126 MARCH10Q8NA82 808 aaPredicted RBP7.2□□□□□ -1.26
SMAD4-212ENST00000591126 BICD1Q96G01 975 aa7.2□□□□□ -1.26
SMAD4-212ENST00000591126 PHACTR3Q96KR7 559 aa7.2□□□□□ -1.26
SMAD4-212ENST00000591126 TNS2Q63HR2 1409 aa7.2□□□□□ -1.26
SMAD4-212ENST00000591126 ECE2O60344 883 aa7.19□□□□□ -1.26
SMAD4-212ENST00000591126 UBA7P41226 1012 aa7.19□□□□□ -1.26
SMAD4-212ENST00000591126 RBM25P49756 843 aaKnown RBP7.19□□□□□ -1.26
SMAD4-212ENST00000591126 ZNF157P51786 506 aaPredicted RBP7.19□□□□□ -1.26
SMAD4-212ENST00000591126 PRPF40BQ6NWY9 871 aaKnown RBP7.19□□□□□ -1.26
SMAD4-212ENST00000591126 NRBP2Q9NSY0 501 aa7.19□□□□□ -1.26
SMAD4-212ENST00000591126 WWC3Q9ULE0 1092 aa7.19□□□□□ -1.26
SMAD4-212ENST00000591126 USP17L5A8MUK1 530 aa7.19□□□□□ -1.26
SMAD4-212ENST00000591126 CDR1P51861 262 aa7.19□□□□□ -1.26
SMAD4-212ENST00000591126 DOK7Q18PE1 504 aa7.19□□□□□ -1.26
SMAD4-212ENST00000591126 CWF19L2Q2TBE0 894 aaKnown RBP7.19□□□□□ -1.26
SMAD4-212ENST00000591126 CSRNP1Q96S65 589 aa7.19□□□□□ -1.26
SMAD4-212ENST00000591126 USP16Q9Y5T5 823 aa7.19□□□□□ -1.26
SMAD4-212ENST00000591126 TCP10L2B9ZVM9 353 aa7.19□□□□□ -1.26
SMAD4-212ENST00000591126 CYP27B1O15528 508 aa7.19□□□□□ -1.26
SMAD4-212ENST00000591126 HOXA7P31268 230 aaPredicted RBP7.19□□□□□ -1.26
SMAD4-212ENST00000591126 BCAMP50895 628 aa7.19□□□□□ -1.26
SMAD4-212ENST00000591126 FCGRTP55899 365 aa7.19□□□□□ -1.26
SMAD4-212ENST00000591126 C9orf131Q5VYM1 1079 aa7.19□□□□□ -1.26
SMAD4-212ENST00000591126 STK11IPQ8N1F8 1099 aa7.19□□□□□ -1.26
SMAD4-212ENST00000591126 NKX2-3Q8TAU0 364 aa7.19□□□□□ -1.26
SMAD4-212ENST00000591126 CDC42EP1Q00587 391 aa7.19□□□□□ -1.26
SMAD4-212ENST00000591126 ICA1Q05084 483 aa7.19□□□□□ -1.26
SMAD4-212ENST00000591126 NFIXQ14938 502 aa7.19□□□□□ -1.26
SMAD4-212ENST00000591126 UBE3CQ15386 1083 aa7.19□□□□□ -1.26
SMAD4-212ENST00000591126 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.19□□□□□ -1.26
SMAD4-212ENST00000591126 COPRSQ9NQ92 184 aa7.19□□□□□ -1.26
SMAD4-212ENST00000591126 KBTBD13C9JR72 458 aa7.18□□□□□ -1.26
SMAD4-212ENST00000591126 MBD4O95243 580 aa7.18□□□□□ -1.26
SMAD4-212ENST00000591126 BTDP43251 543 aa7.18□□□□□ -1.26
SMAD4-212ENST00000591126 SPOUT1Q5T280 376 aaKnown RBP7.18□□□□□ -1.26
SMAD4-212ENST00000591126 KRT79Q5XKE5 535 aa7.18□□□□□ -1.26
SMAD4-212ENST00000591126 SYCP3Q8IZU3 236 aa7.18□□□□□ -1.26
SMAD4-212ENST00000591126 FAM193BQ96PV7 902 aaPredicted RBP7.18□□□□□ -1.26
SMAD4-212ENST00000591126 MLXIPQ9HAP2 919 aa7.18□□□□□ -1.26
SMAD4-212ENST00000591126 VAT1LQ9HCJ6 419 aa7.18□□□□□ -1.26
SMAD4-212ENST00000591126 USP42Q9H9J4 1324 aaKnown RBP7.18□□□□□ -1.26
SMAD4-212ENST00000591126 TOP1P11387 765 aaKnown RBP7.18□□□□□ -1.26
SMAD4-212ENST00000591126 ACTN1P12814 892 aa7.18□□□□□ -1.26
SMAD4-212ENST00000591126 KRT13P13646 458 aa7.18□□□□□ -1.26
SMAD4-212ENST00000591126 GIMAP6Q6P9H5 292 aa7.18□□□□□ -1.26
SMAD4-212ENST00000591126 KRT25Q7Z3Z0 450 aa7.18□□□□□ -1.26
SMAD4-212ENST00000591126 NCAPG2Q86XI2 1143 aa7.18□□□□□ -1.26
SMAD4-212ENST00000591126 ANKRD13AQ8IZ07 590 aa7.18□□□□□ -1.26
SMAD4-212ENST00000591126 ZNF397Q8NF99 534 aaPredicted RBP7.18□□□□□ -1.26
SMAD4-212ENST00000591126 PIBF1Q8WXW3 757 aa7.18□□□□□ -1.26
SMAD4-212ENST00000591126 SPATA32Q96LK8 384 aa7.18□□□□□ -1.26
SMAD4-212ENST00000591126 TCHPQ9BT92 498 aa7.18□□□□□ -1.26
SMAD4-212ENST00000591126 SCAND2PQ9GZW5 306 aaPredicted RBP7.18□□□□□ -1.26
SMAD4-212ENST00000591126 LRFN2Q9ULH4 789 aa7.18□□□□□ -1.26
SMAD4-212ENST00000591126 ITSN1Q15811 1721 aa7.18□□□□□ -1.26
SMAD4-212ENST00000591126 USP32Q8NFA0 1604 aa7.18□□□□□ -1.26
SMAD4-212ENST00000591126 PTPDC1A2A3K4 754 aa7.18□□□□□ -1.26
SMAD4-212ENST00000591126 ASB14A6NK59 587 aa7.18□□□□□ -1.26
SMAD4-212ENST00000591126 RAD17O75943 681 aa7.18□□□□□ -1.26
SMAD4-212ENST00000591126 TFDP1Q14186 410 aa7.18□□□□□ -1.26
SMAD4-212ENST00000591126 SF3B3Q15393 1217 aaKnown RBP7.18□□□□□ -1.26
SMAD4-212ENST00000591126 CDCA7LQ96GN5 454 aa7.18□□□□□ -1.26
SMAD4-212ENST00000591126 PAGR1Q9BTK6 254 aa7.18□□□□□ -1.26
SMAD4-212ENST00000591126 SMTNL1A8MU46 457 aa7.18□□□□□ -1.26
SMAD4-212ENST00000591126 PATL2C9JE40 543 aaKnown RBP7.18□□□□□ -1.26
SMAD4-212ENST00000591126 CFAP100Q494V2 611 aa7.18□□□□□ -1.26
SMAD4-212ENST00000591126 ASPRV1Q53RT3 343 aa7.18□□□□□ -1.26
SMAD4-212ENST00000591126 ZSCAN16Q9H4T2 348 aaPredicted RBP7.18□□□□□ -1.26
SMAD4-212ENST00000591126 IQSEC3Q9UPP2 1182 aaPredicted RBP7.18□□□□□ -1.26
SMAD4-212ENST00000591126 ABCC12Q96J65 1359 aa7.17□□□□□ -1.26
SMAD4-212ENST00000591126 PER1O15534 1290 aaPredicted RBP7.17□□□□□ -1.26
SMAD4-212ENST00000591126 ENTPD3O75355 529 aa7.17□□□□□ -1.26
SMAD4-212ENST00000591126 GCLCP48506 637 aaPredicted RBP7.17□□□□□ -1.26
SMAD4-212ENST00000591126 PRKG1Q13976 671 aa7.17□□□□□ -1.26
SMAD4-212ENST00000591126 FKBP15Q5T1M5 1219 aa7.17□□□□□ -1.26
SMAD4-212ENST00000591126 TMEM179Q6ZVK1 233 aa7.17□□□□□ -1.26
SMAD4-212ENST00000591126 KIAA1210Q9ULL0 1709 aa7.17□□□□□ -1.26
SMAD4-212ENST00000591126 E9PCH4 1651 aa7.17□□□□□ -1.26
SMAD4-212ENST00000591126 GCOM1H8Y6P7 765 aaPredicted RBP7.17□□□□□ -1.26
SMAD4-212ENST00000591126 FLOT1O75955 427 aa7.17□□□□□ -1.26
SMAD4-212ENST00000591126 POLR2MP0CAP2 368 aa7.17□□□□□ -1.26
SMAD4-212ENST00000591126 ATP5JP18859 108 aa7.17□□□□□ -1.26
SMAD4-212ENST00000591126 BMP2KLQ5H9B9 411 aa7.17□□□□□ -1.26
SMAD4-212ENST00000591126 HTATIP2Q9BUP3 242 aa7.17□□□□□ -1.26
SMAD4-212ENST00000591126 TRIM6Q9C030 488 aaPredicted RBP7.17□□□□□ -1.26
SMAD4-212ENST00000591126 LIMCH1Q9UPQ0 1083 aa7.17□□□□□ -1.26
SMAD4-212ENST00000591126 RBM19Q9Y4C8 960 aaKnown RBP7.17□□□□□ -1.26
SMAD4-212ENST00000591126 CTAGE5O15320 804 aa7.17□□□□□ -1.26
SMAD4-212ENST00000591126 PRMT2P55345 433 aa7.17□□□□□ -1.26
SMAD4-212ENST00000591126 ARHGEF16Q5VV41 709 aa7.17□□□□□ -1.26
SMAD4-212ENST00000591126 HEATR3Q7Z4Q2 680 aa7.17□□□□□ -1.26
SMAD4-212ENST00000591126 KBTBD3Q8NAB2 608 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms