RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 FDPSP14324 419 aaKnown RBP12.12□□□□□ -0.47
VPS25-203ENST00000589520 IL1R1P14778 569 aa12.12□□□□□ -0.47
VPS25-203ENST00000589520 NASPP49321 788 aaPredicted RBP12.12□□□□□ -0.47
VPS25-203ENST00000589520 CTDSPL2Q05D32 466 aa12.12□□□□□ -0.47
VPS25-203ENST00000589520 WTAPQ15007 396 aa12.12□□□□□ -0.47
VPS25-203ENST00000589520 UVSSAQ2YD98 709 aa12.12□□□□□ -0.47
VPS25-203ENST00000589520 FERMT3Q86UX7 667 aa12.12□□□□□ -0.47
VPS25-203ENST00000589520 IQCA1Q86XH1 822 aa12.12□□□□□ -0.47
VPS25-203ENST00000589520 AMOTL1Q8IY63 956 aa12.12□□□□□ -0.47
VPS25-203ENST00000589520 LEO1Q8WVC0 666 aaPredicted RBP12.12□□□□□ -0.47
VPS25-203ENST00000589520 UBAC1Q9BSL1 405 aa12.12□□□□□ -0.47
VPS25-203ENST00000589520 TSPY26PQ9H489 355 aa12.12□□□□□ -0.47
VPS25-203ENST00000589520 GDPD2Q9HCC8 539 aa12.12□□□□□ -0.47
VPS25-203ENST00000589520 DDX19AQ9NUU7 478 aaKnown RBP12.12□□□□□ -0.47
VPS25-203ENST00000589520 SUGT1Q9Y2Z0 365 aa12.12□□□□□ -0.47
VPS25-203ENST00000589520 TIAM2Q8IVF5 1701 aa12.11□□□□□ -0.47
VPS25-203ENST00000589520 LAMA4Q16363 1823 aa12.11□□□□□ -0.47
VPS25-203ENST00000589520 UBR3Q6ZT12 1888 aa12.11□□□□□ -0.47
VPS25-203ENST00000589520 DUOX1Q9NRD9 1551 aa12.11□□□□□ -0.47
VPS25-203ENST00000589520 GOLGA8AA7E2F4 631 aa12.11□□□□□ -0.47
VPS25-203ENST00000589520 ORC4O43929 436 aa12.11□□□□□ -0.47
VPS25-203ENST00000589520 NPR1P16066 1061 aa12.11□□□□□ -0.47
VPS25-203ENST00000589520 PLCG2P16885 1265 aa12.11□□□□□ -0.47
VPS25-203ENST00000589520 IFNAR1P17181 557 aa12.11□□□□□ -0.47
VPS25-203ENST00000589520 IARSP41252 1262 aaKnown RBP12.11□□□□□ -0.47
VPS25-203ENST00000589520 PDE4BQ07343 736 aa12.11□□□□□ -0.47
VPS25-203ENST00000589520 CCDC173Q0VFZ6 552 aa12.11□□□□□ -0.47
VPS25-203ENST00000589520 CHAF1AQ13111 956 aaPredicted RBP12.11□□□□□ -0.47
VPS25-203ENST00000589520 ADGRA1Q86SQ6 560 aa12.11□□□□□ -0.47
VPS25-203ENST00000589520 TTC6Q86TZ1 520 aa12.11□□□□□ -0.47
VPS25-203ENST00000589520 CCDC24Q8N4L8 307 aa12.11□□□□□ -0.47
VPS25-203ENST00000589520 CHAMP1Q96JM3 812 aa12.11□□□□□ -0.47
VPS25-203ENST00000589520 NCOA5Q9HCD5 579 aaKnown RBP12.11□□□□□ -0.47
VPS25-203ENST00000589520 CD209Q9NNX6 404 aa12.11□□□□□ -0.47
VPS25-203ENST00000589520 TOMM22Q9NS69 142 aa12.11□□□□□ -0.47
VPS25-203ENST00000589520 RBM27Q9P2N5 1060 aaKnown RBP12.11□□□□□ -0.47
VPS25-203ENST00000589520 NSFL1CQ9UNZ2 370 aaKnown RBP12.11□□□□□ -0.47
VPS25-203ENST00000589520 A0A1B0GUL6 1792 aa12.1□□□□□ -0.47
VPS25-203ENST00000589520 COL1A1P02452 1464 aaPredicted RBP12.1□□□□□ -0.47
VPS25-203ENST00000589520 SYCE3A1L190 88 aa12.1□□□□□ -0.47
VPS25-203ENST00000589520 DCAF8L1A6NGE4 600 aa12.1□□□□□ -0.47
VPS25-203ENST00000589520 MINDY4BA8MYZ0 360 aa12.1□□□□□ -0.47
VPS25-203ENST00000589520 BAG6P46379 1132 aa12.1□□□□□ -0.47
VPS25-203ENST00000589520 GPSM2P81274 684 aa12.1□□□□□ -0.47
VPS25-203ENST00000589520 EN1Q05925 392 aaPredicted RBP12.1□□□□□ -0.47
VPS25-203ENST00000589520 DDR1Q08345 913 aa12.1□□□□□ -0.47
VPS25-203ENST00000589520 SSRP1Q08945 709 aaKnown RBP12.1□□□□□ -0.47
VPS25-203ENST00000589520 TRIM29Q14134 588 aa12.1□□□□□ -0.47
VPS25-203ENST00000589520 CTR9Q6PD62 1173 aa12.1□□□□□ -0.47
VPS25-203ENST00000589520 TRIM22Q8IYM9 498 aa12.1□□□□□ -0.47
VPS25-203ENST00000589520 FAM163AQ96GL9 167 aaPredicted RBP12.1□□□□□ -0.47
VPS25-203ENST00000589520 ZNF287Q9HBT7 754 aa12.1□□□□□ -0.47
VPS25-203ENST00000589520 DCP1AQ9NPI6 582 aaPredicted RBP12.1□□□□□ -0.47
VPS25-203ENST00000589520 GPHNQ9NQX3 736 aaPredicted RBP12.1□□□□□ -0.47
VPS25-203ENST00000589520 RBM28Q9NW13 759 aaKnown RBP12.1□□□□□ -0.47
VPS25-203ENST00000589520 RTEL1Q9NZ71 1219 aa12.1□□□□□ -0.47
VPS25-203ENST00000589520 ATP6V0A2Q9Y487 856 aa12.1□□□□□ -0.47
VPS25-203ENST00000589520 PARP3Q9Y6F1 533 aa12.1□□□□□ -0.47
VPS25-203ENST00000589520 CTAGE5O15320 804 aa12.09□□□□□ -0.47
VPS25-203ENST00000589520 UFL1O94874 794 aa12.09□□□□□ -0.47
VPS25-203ENST00000589520 FMNL1O95466 1100 aaPredicted RBP12.09□□□□□ -0.47
VPS25-203ENST00000589520 KLRK1P26718 216 aa12.09□□□□□ -0.47
VPS25-203ENST00000589520 DYNLL1P63167 89 aaKnown RBP12.09□□□□□ -0.47
VPS25-203ENST00000589520 NTRK3Q16288 839 aa12.09□□□□□ -0.47
VPS25-203ENST00000589520 RTN1Q16799 776 aa12.09□□□□□ -0.47
VPS25-203ENST00000589520 RRP12Q5JTH9 1297 aaKnown RBP12.09□□□□□ -0.47
VPS25-203ENST00000589520 TXNRD3Q86VQ6 643 aa12.09□□□□□ -0.47
VPS25-203ENST00000589520 SDR42E1Q8WUS8 393 aa12.09□□□□□ -0.47
VPS25-203ENST00000589520 ZSCAN10Q96SZ4 725 aaPredicted RBP12.09□□□□□ -0.47
VPS25-203ENST00000589520 ALG1Q9BT22 464 aa12.09□□□□□ -0.47
VPS25-203ENST00000589520 COA1Q9GZY4 146 aa12.09□□□□□ -0.47
VPS25-203ENST00000589520 COL4A1P02462 1669 aa12.09□□□□□ -0.47
VPS25-203ENST00000589520 WTIPA6NIX2 430 aaPredicted RBP12.08□□□□□ -0.48
VPS25-203ENST00000589520 USP17L12C9JPN9 530 aa12.08□□□□□ -0.48
VPS25-203ENST00000589520 USP17L21D6R901 530 aa12.08□□□□□ -0.48
VPS25-203ENST00000589520 PPEF1O14829 653 aaPredicted RBP12.08□□□□□ -0.48
VPS25-203ENST00000589520 DDAH1O94760 285 aa12.08□□□□□ -0.48
VPS25-203ENST00000589520 DEXIO95424 95 aa12.08□□□□□ -0.48
VPS25-203ENST00000589520 YEATS4O95619 227 aa12.08□□□□□ -0.48
VPS25-203ENST00000589520 CAVIN2O95810 425 aa12.08□□□□□ -0.48
VPS25-203ENST00000589520 XBP1P17861 261 aa12.08□□□□□ -0.48
VPS25-203ENST00000589520 PRDX5P30044 214 aa12.08□□□□□ -0.48
VPS25-203ENST00000589520 ADD1P35611 737 aaKnown RBP12.08□□□□□ -0.48
VPS25-203ENST00000589520 SAFBQ15424 915 aaKnown RBP eCLIP12.08□□□□□ -0.48
VPS25-203ENST00000589520 CATIPQ7Z7H3 387 aa12.08□□□□□ -0.48
VPS25-203ENST00000589520 COL23A1Q86Y22 540 aaPredicted RBP12.08□□□□□ -0.48
VPS25-203ENST00000589520 FANCBQ8NB91 859 aa12.08□□□□□ -0.48
VPS25-203ENST00000589520 TBC1D16Q8TBP0 767 aa12.08□□□□□ -0.48
VPS25-203ENST00000589520 KCNG4Q8TDN1 519 aa12.08□□□□□ -0.48
VPS25-203ENST00000589520 ZNF384Q8TF68 577 aa12.08□□□□□ -0.48
VPS25-203ENST00000589520 MASTLQ96GX5 879 aa12.08□□□□□ -0.48
VPS25-203ENST00000589520 PPP1R9BQ96SB3 815 aa12.08□□□□□ -0.48
VPS25-203ENST00000589520 POLR3EQ9NVU0 708 aa12.08□□□□□ -0.48
VPS25-203ENST00000589520 AATFQ9NY61 560 aaKnown RBP eCLIP12.08□□□□□ -0.48
VPS25-203ENST00000589520 CACNA1SQ13698 1873 aa12.08□□□□□ -0.48
VPS25-203ENST00000589520 FAM205AQ6ZU69 1335 aa12.08□□□□□ -0.48
VPS25-203ENST00000589520 A0A1W2PQ27 194 aa12.07□□□□□ -0.48
VPS25-203ENST00000589520 A0A1W2PQ64 194 aa12.07□□□□□ -0.48
VPS25-203ENST00000589520 A0A1W2PQD8 194 aa12.07□□□□□ -0.48
VPS25-203ENST00000589520 CAPN15O75808 1086 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms