RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 MDFIQ99750 246 aa7.51□□□□□ -1.21
DNMT1-220ENST00000589351 SRP68Q9UHB9 627 aaKnown RBP7.51□□□□□ -1.21
DNMT1-220ENST00000589351 H0YIN7 160 aa7.5□□□□□ -1.21
DNMT1-220ENST00000589351 INHAP05111 366 aa7.5□□□□□ -1.21
DNMT1-220ENST00000589351 VEGFAP15692 232 aaPredicted RBP7.5□□□□□ -1.21
DNMT1-220ENST00000589351 ALAS2P22557 587 aa7.5□□□□□ -1.21
DNMT1-220ENST00000589351 CHRNA5P30532 468 aa7.5□□□□□ -1.21
DNMT1-220ENST00000589351 ZNF295-AS1Q8N0V1 137 aa7.5□□□□□ -1.21
DNMT1-220ENST00000589351 TTLL6Q8N841 843 aa7.5□□□□□ -1.21
DNMT1-220ENST00000589351 MARK1Q9P0L2 795 aa7.5□□□□□ -1.21
DNMT1-220ENST00000589351 NARFQ9UHQ1 456 aa7.5□□□□□ -1.21
DNMT1-220ENST00000589351 NDUFB9Q9Y6M9 179 aa7.5□□□□□ -1.21
DNMT1-220ENST00000589351 A0A087WZG4 1122 aa7.49□□□□□ -1.21
DNMT1-220ENST00000589351 BTBD11A6QL63 1104 aa7.49□□□□□ -1.21
DNMT1-220ENST00000589351 POLRMTO00411 1230 aaKnown RBP7.49□□□□□ -1.21
DNMT1-220ENST00000589351 STARD3NLO95772 234 aa7.49□□□□□ -1.21
DNMT1-220ENST00000589351 SERPINB2P05120 415 aa7.49□□□□□ -1.21
DNMT1-220ENST00000589351 PDIA4P13667 645 aaKnown RBP7.49□□□□□ -1.21
DNMT1-220ENST00000589351 SMTNP53814 917 aa7.49□□□□□ -1.21
DNMT1-220ENST00000589351 GDF10P55107 478 aa7.49□□□□□ -1.21
DNMT1-220ENST00000589351 GRIK4Q16099 956 aa7.49□□□□□ -1.21
DNMT1-220ENST00000589351 OXLD1Q5BKU9 147 aa7.49□□□□□ -1.21
DNMT1-220ENST00000589351 USPL1Q5W0Q7 1092 aa7.49□□□□□ -1.21
DNMT1-220ENST00000589351 INTS5Q6P9B9 1019 aaKnown RBP7.49□□□□□ -1.21
DNMT1-220ENST00000589351 SYT9Q86SS6 491 aa7.49□□□□□ -1.21
DNMT1-220ENST00000589351 TTC5Q8N0Z6 440 aa7.49□□□□□ -1.21
DNMT1-220ENST00000589351 JMYQ8N9B5 988 aa7.49□□□□□ -1.21
DNMT1-220ENST00000589351 MTMR14Q8NCE2 650 aa7.49□□□□□ -1.21
DNMT1-220ENST00000589351 TEX13AQ9BXU3 409 aaPredicted RBP7.49□□□□□ -1.21
DNMT1-220ENST00000589351 SLC52A2Q9HAB3 445 aa7.49□□□□□ -1.21
DNMT1-220ENST00000589351 ARFGEF1Q9Y6D6 1849 aa7.49□□□□□ -1.21
DNMT1-220ENST00000589351 COL5A3P25940 1745 aaPredicted RBP7.49□□□□□ -1.21
DNMT1-220ENST00000589351 GLTPD2A6NH11 291 aa7.48□□□□□ -1.21
DNMT1-220ENST00000589351 M0R082 166 aa7.48□□□□□ -1.21
DNMT1-220ENST00000589351 NPHP1O15259 732 aa7.48□□□□□ -1.21
DNMT1-220ENST00000589351 KDM6AO15550 1401 aaPredicted RBP7.48□□□□□ -1.21
DNMT1-220ENST00000589351 DDR1Q08345 913 aa7.48□□□□□ -1.21
DNMT1-220ENST00000589351 C8orf86Q6ZUL3 223 aa7.48□□□□□ -1.21
DNMT1-220ENST00000589351 AEBP1Q8IUX7 1158 aa7.48□□□□□ -1.21
DNMT1-220ENST00000589351 DNAJC10Q8IXB1 793 aa7.48□□□□□ -1.21
DNMT1-220ENST00000589351 ZNF417Q8TAU3 575 aa7.48□□□□□ -1.21
DNMT1-220ENST00000589351 ZNF587Q96SQ5 575 aaPredicted RBP7.48□□□□□ -1.21
DNMT1-220ENST00000589351 PCGF6Q9BYE7 350 aa7.48□□□□□ -1.21
DNMT1-220ENST00000589351 KIAA1551Q9HCM1 1747 aa7.48□□□□□ -1.21
DNMT1-220ENST00000589351 KCPQ6ZWJ8 1503 aa7.47□□□□□ -1.21
DNMT1-220ENST00000589351 WDR90Q96KV7 1748 aa7.47□□□□□ -1.21
DNMT1-220ENST00000589351 RNMTO43148 476 aaKnown RBP7.47□□□□□ -1.21
DNMT1-220ENST00000589351 EFSO43281 561 aa7.47□□□□□ -1.21
DNMT1-220ENST00000589351 HSPA5P11021 654 aaKnown RBP7.47□□□□□ -1.21
DNMT1-220ENST00000589351 CYP19A1P11511 503 aaPredicted RBP7.47□□□□□ -1.21
DNMT1-220ENST00000589351 IL13P35225 146 aa7.47□□□□□ -1.21
DNMT1-220ENST00000589351 PDE6BP35913 854 aa7.47□□□□□ -1.21
DNMT1-220ENST00000589351 TRIM28Q13263 835 aaKnown RBP7.47□□□□□ -1.21
DNMT1-220ENST00000589351 LRP8Q14114 963 aa7.47□□□□□ -1.21
DNMT1-220ENST00000589351 NFIXQ14938 502 aa7.47□□□□□ -1.21
DNMT1-220ENST00000589351 C2CD5Q86YS7 1000 aa7.47□□□□□ -1.21
DNMT1-220ENST00000589351 TNS4Q8IZW8 715 aa7.47□□□□□ -1.21
DNMT1-220ENST00000589351 ZDHHC3Q9NYG2 299 aa7.47□□□□□ -1.21
DNMT1-220ENST00000589351 STARD13Q9Y3M8 1113 aa7.47□□□□□ -1.21
DNMT1-220ENST00000589351 GJA3Q9Y6H8 435 aa7.47□□□□□ -1.21
DNMT1-220ENST00000589351 MYH14Q7Z406 1995 aaKnown RBP7.47□□□□□ -1.21
DNMT1-220ENST00000589351 SOS1Q07889 1333 aaPredicted RBP7.47□□□□□ -1.21
DNMT1-220ENST00000589351 BRCA1P38398 1863 aaKnown RBP7.47□□□□□ -1.21
DNMT1-220ENST00000589351 COL15A1P39059 1388 aa7.46□□□□□ -1.21
DNMT1-220ENST00000589351 HYAL3O43820 417 aaPredicted RBP7.46□□□□□ -1.22
DNMT1-220ENST00000589351 DIAPH1O60610 1272 aaKnown RBP7.46□□□□□ -1.22
DNMT1-220ENST00000589351 CANXP27824 592 aaKnown RBP7.46□□□□□ -1.22
DNMT1-220ENST00000589351 TEFQ10587 303 aa7.46□□□□□ -1.22
DNMT1-220ENST00000589351 SLC39A6Q13433 755 aa7.46□□□□□ -1.22
DNMT1-220ENST00000589351 LAMC2Q13753 1193 aa7.46□□□□□ -1.22
DNMT1-220ENST00000589351 SAMD5Q5TGI4 173 aa7.46□□□□□ -1.22
DNMT1-220ENST00000589351 BANK1Q8NDB2 785 aa7.46□□□□□ -1.22
DNMT1-220ENST00000589351 ZNF622Q969S3 477 aaKnown RBP eCLIP7.46□□□□□ -1.222e-9■□□□□ 10.8
DNMT1-220ENST00000589351 NACC1Q96RE7 527 aa7.46□□□□□ -1.22
DNMT1-220ENST00000589351 LGR6Q9HBX8 967 aa7.46□□□□□ -1.22
DNMT1-220ENST00000589351 IQSEC3Q9UPP2 1182 aaPredicted RBP7.46□□□□□ -1.22
DNMT1-220ENST00000589351 USP3Q9Y6I4 520 aa7.46□□□□□ -1.22
DNMT1-220ENST00000589351 TNRC6CQ9HCJ0 1690 aaKnown RBP7.45□□□□□ -1.22
DNMT1-220ENST00000589351 SIN3BO75182 1162 aa7.45□□□□□ -1.22
DNMT1-220ENST00000589351 HMOX1P09601 288 aa7.45□□□□□ -1.22
DNMT1-220ENST00000589351 HTRA3P83110 453 aa7.45□□□□□ -1.22
DNMT1-220ENST00000589351 SLFNL1Q499Z3 407 aa7.45□□□□□ -1.22
DNMT1-220ENST00000589351 COL13A1Q5TAT6 717 aaPredicted RBP7.45□□□□□ -1.22
DNMT1-220ENST00000589351 SOGA3Q5TF21 947 aa7.45□□□□□ -1.22
DNMT1-220ENST00000589351 BICDL1Q6ZP65 573 aa7.45□□□□□ -1.22
DNMT1-220ENST00000589351 BRIP1Q9BX63 1249 aa7.45□□□□□ -1.22
DNMT1-220ENST00000589351 SERTAD1Q9UHV2 236 aa7.45□□□□□ -1.22
DNMT1-220ENST00000589351 ZBTB1Q9Y2K1 713 aa7.45□□□□□ -1.22
DNMT1-220ENST00000589351 SBF1O95248 1867 aa7.45□□□□□ -1.22
DNMT1-220ENST00000589351 SCN11AQ9UI33 1791 aa7.44□□□□□ -1.22
DNMT1-220ENST00000589351 KRTAP4-8A0A0G2JLE6 195 aa7.44□□□□□ -1.22
DNMT1-220ENST00000589351 GNAT3A8MTJ3 354 aa7.44□□□□□ -1.22
DNMT1-220ENST00000589351 ADARB2-AS1A8MUL3 147 aa7.44□□□□□ -1.22
DNMT1-220ENST00000589351 CDK2AP1O14519 115 aa7.44□□□□□ -1.22
DNMT1-220ENST00000589351 ALBP02768 609 aa7.44□□□□□ -1.22
DNMT1-220ENST00000589351 H2AFB1P0C5Y9 115 aa7.44□□□□□ -1.22
DNMT1-220ENST00000589351 H2AFB2P0C5Z0 115 aa7.44□□□□□ -1.22
DNMT1-220ENST00000589351 ST5P78524 1137 aa7.44□□□□□ -1.22
DNMT1-220ENST00000589351 MICALL1Q8N3F8 863 aa7.44□□□□□ -1.22
DNMT1-220ENST00000589351 SETDB2Q96T68 719 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms