RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 CXCL11O14625 94 aa22.92■■□□□ 1.26
CCDC43-204ENST00000588687 ENTPD3O75355 529 aa22.92■■□□□ 1.26
CCDC43-204ENST00000588687 ECM2O94769 699 aaPredicted RBP22.92■■□□□ 1.26
CCDC43-204ENST00000588687 SLURP2P0DP57 97 aa22.92■■□□□ 1.26
CCDC43-204ENST00000588687 PRRT2Q7Z6L0 340 aaPredicted RBP22.92■■□□□ 1.26
CCDC43-204ENST00000588687 ZNF384Q8TF68 577 aa22.92■■□□□ 1.26
CCDC43-204ENST00000588687 DDX4Q9NQI0 724 aaKnown RBP22.92■■□□□ 1.26
CCDC43-204ENST00000588687 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.92■■□□□ 1.26
CCDC43-204ENST00000588687 CYP2C8P10632 490 aa22.91■■□□□ 1.26
CCDC43-204ENST00000588687 UBE2Q1Q7Z7E8 422 aa22.91■■□□□ 1.26
CCDC43-204ENST00000588687 SCYL3Q8IZE3 742 aa22.91■■□□□ 1.26
CCDC43-204ENST00000588687 FAM163AQ96GL9 167 aaPredicted RBP22.91■■□□□ 1.26
CCDC43-204ENST00000588687 PARK7Q99497 189 aaKnown RBP22.91■■□□□ 1.26
CCDC43-204ENST00000588687 LOC285556D6RIA3 1793 aa22.91■■□□□ 1.26
CCDC43-204ENST00000588687 MYPNQ86TC9 1320 aa22.9■■□□□ 1.26
CCDC43-204ENST00000588687 DDTLA6NHG4 134 aaPredicted RBP22.9■■□□□ 1.26
CCDC43-204ENST00000588687 PTPRAP18433 802 aa22.9■■□□□ 1.26
CCDC43-204ENST00000588687 ZGPATQ8N5A5 531 aaKnown RBP22.9■■□□□ 1.26
CCDC43-204ENST00000588687 API5Q9BZZ5 524 aaKnown RBP22.9■■□□□ 1.26
CCDC43-204ENST00000588687 MTX1Q13505 466 aa22.89■■□□□ 1.25
CCDC43-204ENST00000588687 COLQQ9Y215 455 aaPredicted RBP22.89■■□□□ 1.25
CCDC43-204ENST00000588687 AFG3L2Q9Y4W6 797 aa22.89■■□□□ 1.25
CCDC43-204ENST00000588687 MROH7-TTC4A0A0A0MT08 1334 aa22.88■■□□□ 1.25
CCDC43-204ENST00000588687 ATAD5Q96QE3 1844 aa22.88■■□□□ 1.25
CCDC43-204ENST00000588687 GRK4P32298 578 aa22.88■■□□□ 1.25
CCDC43-204ENST00000588687 TIMM10P62072 90 aa22.88■■□□□ 1.25
CCDC43-204ENST00000588687 PRKCZQ05513 592 aa22.88■■□□□ 1.25
CCDC43-204ENST00000588687 ZHX2Q9Y6X8 837 aa22.88■■□□□ 1.25
CCDC43-204ENST00000588687 COL2A1P02458 1487 aaPredicted RBP22.87■■□□□ 1.25
CCDC43-204ENST00000588687 A0A1B0GUL7 405 aa22.87■■□□□ 1.25
CCDC43-204ENST00000588687 H0YGN5 161 aa22.87■■□□□ 1.25
CCDC43-204ENST00000588687 FMNL1O95466 1100 aaPredicted RBP22.87■■□□□ 1.25
CCDC43-204ENST00000588687 BTDP43251 543 aa22.87■■□□□ 1.25
CCDC43-204ENST00000588687 RARSP54136 660 aaKnown RBP22.87■■□□□ 1.25
CCDC43-204ENST00000588687 RHBDL3P58872 404 aa22.87■■□□□ 1.25
CCDC43-204ENST00000588687 DZIP1Q86YF9 867 aaKnown RBP22.87■■□□□ 1.25
CCDC43-204ENST00000588687 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.87■■□□□ 1.25
CCDC43-204ENST00000588687 SIPA1L1O43166 1804 aa22.87■■□□□ 1.25
CCDC43-204ENST00000588687 RAET1EQ8TD07 263 aa22.86■■□□□ 1.25
CCDC43-204ENST00000588687 XAGE2Q96GT9 111 aa22.86■■□□□ 1.25
CCDC43-204ENST00000588687 SLC45A1Q9Y2W3 748 aa22.86■■□□□ 1.25
CCDC43-204ENST00000588687 MAST2Q6P0Q8 1798 aa22.86■■□□□ 1.25
CCDC43-204ENST00000588687 CCL5P13501 91 aa22.85■■□□□ 1.25
CCDC43-204ENST00000588687 HOXD10P28358 340 aa22.85■■□□□ 1.25
CCDC43-204ENST00000588687 GJA8P48165 433 aa22.85■■□□□ 1.25
CCDC43-204ENST00000588687 TFCP2Q12800 502 aa22.85■■□□□ 1.25
CCDC43-204ENST00000588687 ABCF2Q9UG63 623 aa22.85■■□□□ 1.25
CCDC43-204ENST00000588687 GABRQQ9UN88 632 aa22.85■■□□□ 1.25
CCDC43-204ENST00000588687 HDAC5Q9UQL6 1122 aa22.85■■□□□ 1.25
CCDC43-204ENST00000588687 GPR75-ASB3A0A0A6YYF3 556 aa22.84■■□□□ 1.25
CCDC43-204ENST00000588687 GJB1P08034 283 aa22.84■■□□□ 1.25
CCDC43-204ENST00000588687 FCGRTP55899 365 aa22.84■■□□□ 1.25
CCDC43-204ENST00000588687 MECOMQ03112 1051 aa22.84■■□□□ 1.25
CCDC43-204ENST00000588687 FASTKD5Q7L8L6 764 aaKnown RBP22.84■■□□□ 1.25
CCDC43-204ENST00000588687 PICK1Q9NRD5 415 aa22.84■■□□□ 1.25
CCDC43-204ENST00000588687 SRGAP3O43295 1099 aa22.83■■□□□ 1.25
CCDC43-204ENST00000588687 CTNND1O60716 968 aaKnown RBP22.83■■□□□ 1.25
CCDC43-204ENST00000588687 NPM3O75607 178 aaKnown RBP22.83■■□□□ 1.25
CCDC43-204ENST00000588687 PICALMQ13492 652 aa22.83■■□□□ 1.25
CCDC43-204ENST00000588687 PI16Q6UXB8 463 aa22.83■■□□□ 1.25
CCDC43-204ENST00000588687 CCDC84Q86UT8 332 aaPredicted RBP22.83■■□□□ 1.25
CCDC43-204ENST00000588687 ARHGAP45Q92619 1136 aa22.83■■□□□ 1.25
CCDC43-204ENST00000588687 DOCK3Q8IZD9 2030 aa22.82■■□□□ 1.24
CCDC43-204ENST00000588687 CDK5RAP2Q96SN8 1893 aa22.82■■□□□ 1.24
CCDC43-204ENST00000588687 MVPQ14764 893 aaKnown RBP22.82■■□□□ 1.24
CCDC43-204ENST00000588687 ZSCAN29Q8IWY8 852 aaPredicted RBP22.82■■□□□ 1.24
CCDC43-204ENST00000588687 SLF2Q8IX21 1173 aa22.82■■□□□ 1.24
CCDC43-204ENST00000588687 SLAIN1Q8ND83 568 aa22.82■■□□□ 1.24
CCDC43-204ENST00000588687 HMG20BQ9P0W2 317 aa22.82■■□□□ 1.24
CCDC43-204ENST00000588687 FOCADQ5VW36 1801 aa22.81■■□□□ 1.24
CCDC43-204ENST00000588687 TBC1D12O60347 775 aa22.81■■□□□ 1.24
CCDC43-204ENST00000588687 SPTY2D1Q68D10 685 aaPredicted RBP22.81■■□□□ 1.24
CCDC43-204ENST00000588687 GADL1Q6ZQY3 521 aa22.81■■□□□ 1.24
CCDC43-204ENST00000588687 NKX2-3Q8TAU0 364 aa22.81■■□□□ 1.24
CCDC43-204ENST00000588687 NSUN4Q96CB9 384 aaKnown RBP22.81■■□□□ 1.24
CCDC43-204ENST00000588687 AKAP2Q9Y2D5 859 aa22.81■■□□□ 1.24
CCDC43-204ENST00000588687 TRIM75PA6NK02 468 aa22.8■■□□□ 1.24
CCDC43-204ENST00000588687 FAM196BA6NMK8 535 aa22.8■■□□□ 1.24
CCDC43-204ENST00000588687 GNAI3P08754 354 aa22.8■■□□□ 1.24
CCDC43-204ENST00000588687 ARID4AP29374 1257 aaPredicted RBP22.8■■□□□ 1.24
CCDC43-204ENST00000588687 RNF208Q9H0X6 261 aa22.8■■□□□ 1.24
CCDC43-204ENST00000588687 UNC93B1Q9H1C4 597 aa22.8■■□□□ 1.24
CCDC43-204ENST00000588687 AGTPBP1Q9UPW5 1226 aa22.8■■□□□ 1.24
CCDC43-204ENST00000588687 TNNQ9UQP3 1299 aa22.8■■□□□ 1.24
CCDC43-204ENST00000588687 FLT3LGP49771 235 aa22.79■■□□□ 1.24
CCDC43-204ENST00000588687 TREML2Q5T2D2 321 aa22.79■■□□□ 1.24
CCDC43-204ENST00000588687 ERICH6Q7L0X2 663 aa22.79■■□□□ 1.24
CCDC43-204ENST00000588687 U2AF1L4Q8WU68 220 aaKnown RBP22.79■■□□□ 1.24
CCDC43-204ENST00000588687 PRO3102Q9H379 93 aa22.79■■□□□ 1.24
CCDC43-204ENST00000588687 ALPK3Q96L96 1907 aa22.78■■□□□ 1.24
CCDC43-204ENST00000588687 TRIM27P14373 513 aa22.78■■□□□ 1.24
CCDC43-204ENST00000588687 UBXN2AP68543 259 aa22.78■■□□□ 1.24
CCDC43-204ENST00000588687 IRF5Q13568 498 aa22.78■■□□□ 1.24
CCDC43-204ENST00000588687 RRP1BQ14684 758 aaKnown RBP22.78■■□□□ 1.24
CCDC43-204ENST00000588687 SPATA5Q8NB90 893 aa22.78■■□□□ 1.24
CCDC43-204ENST00000588687 PNMA6EA0A0J9YXQ4 647 aa22.77■■□□□ 1.24
CCDC43-204ENST00000588687 ELNP15502 786 aa22.77■■□□□ 1.24
CCDC43-204ENST00000588687 MCAMP43121 646 aa22.77■■□□□ 1.24
CCDC43-204ENST00000588687 CHRDL2Q6WN34 429 aa22.77■■□□□ 1.24
CCDC43-204ENST00000588687 TBC1D9Q6ZT07 1266 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms