RNA–Protein interactions for RNA: ENST00000587637.2

SF3A2-203, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-203ENST00000587637 MTFR1Q15390 333 aa20.89■□□□□ 0.93
SF3A2-203ENST00000587637 SHISA4Q96DD7 197 aa20.89■□□□□ 0.93
SF3A2-203ENST00000587637 TMEM106CQ9BVX2 250 aa20.89■□□□□ 0.93
SF3A2-203ENST00000587637 CDK5RAP2Q96SN8 1893 aa20.89■□□□□ 0.93
SF3A2-203ENST00000587637 SEMA3EO15041 775 aa20.88■□□□□ 0.93
SF3A2-203ENST00000587637 CT47B1P0C2W7 299 aaPredicted RBP20.88■□□□□ 0.93
SF3A2-203ENST00000587637 OSBPP22059 807 aa20.88■□□□□ 0.93
SF3A2-203ENST00000587637 PSMC4P43686 418 aa20.88■□□□□ 0.93
SF3A2-203ENST00000587637 MROH7-TTC4A0A0A0MT08 1334 aa20.87■□□□□ 0.93
SF3A2-203ENST00000587637 BCAR3O75815 825 aa20.87■□□□□ 0.93
SF3A2-203ENST00000587637 TRIM27P14373 513 aa20.87■□□□□ 0.93
SF3A2-203ENST00000587637 KIF22Q14807 665 aa20.87■□□□□ 0.93
SF3A2-203ENST00000587637 TBC1D9Q6ZT07 1266 aa20.87■□□□□ 0.93
SF3A2-203ENST00000587637 ZSCAN29Q8IWY8 852 aaPredicted RBP20.87■□□□□ 0.93
SF3A2-203ENST00000587637 SCYL3Q8IZE3 742 aa20.87■□□□□ 0.93
SF3A2-203ENST00000587637 IDI2Q9BXS1 227 aa20.87■□□□□ 0.93
SF3A2-203ENST00000587637 DOCK3Q8IZD9 2030 aa20.87■□□□□ 0.93
SF3A2-203ENST00000587637 PNMA6EA0A0J9YXQ4 647 aa20.86■□□□□ 0.93
SF3A2-203ENST00000587637 MECOMQ03112 1051 aa20.86■□□□□ 0.93
SF3A2-203ENST00000587637 CLUAP1Q96AJ1 413 aa20.86■□□□□ 0.93
SF3A2-203ENST00000587637 LOC285556D6RIA3 1793 aa20.86■□□□□ 0.93
SF3A2-203ENST00000587637 MYPNQ86TC9 1320 aa20.85■□□□□ 0.93
SF3A2-203ENST00000587637 ENTPD3O75355 529 aa20.85■□□□□ 0.93
SF3A2-203ENST00000587637 RHBDL3P58872 404 aa20.85■□□□□ 0.93
SF3A2-203ENST00000587637 PRKCZQ05513 592 aa20.85■□□□□ 0.93
SF3A2-203ENST00000587637 HABP4Q5JVS0 413 aaKnown RBP20.85■□□□□ 0.93
SF3A2-203ENST00000587637 GADL1Q6ZQY3 521 aa20.85■□□□□ 0.93
SF3A2-203ENST00000587637 HMG20BQ9P0W2 317 aa20.85■□□□□ 0.93
SF3A2-203ENST00000587637 SRRDQ9UH36 339 aa20.85■□□□□ 0.93
SF3A2-203ENST00000587637 ZHX2Q9Y6X8 837 aa20.85■□□□□ 0.93
SF3A2-203ENST00000587637 A0A0G2JLL6 359 aaPredicted RBP20.84■□□□□ 0.93
SF3A2-203ENST00000587637 BCRP11274 1271 aa20.84■□□□□ 0.93
SF3A2-203ENST00000587637 PTPRAP18433 802 aa20.84■□□□□ 0.93
SF3A2-203ENST00000587637 ARHGEF6Q15052 776 aa20.84■□□□□ 0.93
SF3A2-203ENST00000587637 PRRT2Q7Z6L0 340 aaPredicted RBP20.84■□□□□ 0.93
SF3A2-203ENST00000587637 NBPF11Q86T75 865 aa20.84■□□□□ 0.93
SF3A2-203ENST00000587637 NEUROD6Q96NK8 337 aa20.84■□□□□ 0.93
SF3A2-203ENST00000587637 PARK7Q99497 189 aaKnown RBP20.84■□□□□ 0.93
SF3A2-203ENST00000587637 GABRQQ9UN88 632 aa20.84■□□□□ 0.93
SF3A2-203ENST00000587637 TRIOBPQ9H2D6 2365 aa20.83■□□□□ 0.93
SF3A2-203ENST00000587637 PDS5AQ29RF7 1337 aaKnown RBP20.83■□□□□ 0.93
SF3A2-203ENST00000587637 FMNL1O95466 1100 aaPredicted RBP20.83■□□□□ 0.93
SF3A2-203ENST00000587637 MTX1Q13505 466 aa20.83■□□□□ 0.93
SF3A2-203ENST00000587637 ZGPATQ8N5A5 531 aaKnown RBP20.83■□□□□ 0.93
SF3A2-203ENST00000587637 FRAT1Q92837 279 aaPredicted RBP20.83■□□□□ 0.93
SF3A2-203ENST00000587637 TRIM75PA6NK02 468 aa20.82■□□□□ 0.92
SF3A2-203ENST00000587637 GNAI3P08754 354 aa20.82■□□□□ 0.92
SF3A2-203ENST00000587637 RRP1BQ14684 758 aaKnown RBP20.82■□□□□ 0.92
SF3A2-203ENST00000587637 MVPQ14764 893 aaKnown RBP20.82■□□□□ 0.92
SF3A2-203ENST00000587637 ERICH6Q7L0X2 663 aa20.82■□□□□ 0.92
SF3A2-203ENST00000587637 PICK1Q9NRD5 415 aa20.82■□□□□ 0.92
SF3A2-203ENST00000587637 AFG3L2Q9Y4W6 797 aa20.82■□□□□ 0.92
SF3A2-203ENST00000587637 FOCADQ5VW36 1801 aa20.82■□□□□ 0.92
SF3A2-203ENST00000587637 MCAMP43121 646 aa20.81■□□□□ 0.92
SF3A2-203ENST00000587637 RAET1EQ8TD07 263 aa20.81■□□□□ 0.92
SF3A2-203ENST00000587637 C1orf115Q9H7X2 142 aa20.81■□□□□ 0.92
SF3A2-203ENST00000587637 GPR75-ASB3A0A0A6YYF3 556 aa20.8■□□□□ 0.92
SF3A2-203ENST00000587637 CXCL11O14625 94 aa20.8■□□□□ 0.92
SF3A2-203ENST00000587637 TREML2Q5T2D2 321 aa20.8■□□□□ 0.92
SF3A2-203ENST00000587637 TMEM57Q8N5G2 664 aa20.8■□□□□ 0.92
SF3A2-203ENST00000587637 SPATA5Q8NB90 893 aa20.8■□□□□ 0.92
SF3A2-203ENST00000587637 ARHGAP45Q92619 1136 aa20.8■□□□□ 0.92
SF3A2-203ENST00000587637 NSUN4Q96CB9 384 aaKnown RBP20.8■□□□□ 0.92
SF3A2-203ENST00000587637 CCER2I3L3R5 266 aa20.79■□□□□ 0.92
SF3A2-203ENST00000587637 ZBTB22O15209 634 aa20.79■□□□□ 0.92
SF3A2-203ENST00000587637 ARID4AP29374 1257 aaPredicted RBP20.79■□□□□ 0.92
SF3A2-203ENST00000587637 GRK4P32298 578 aa20.79■□□□□ 0.92
SF3A2-203ENST00000587637 ATF7IPQ6VMQ6 1270 aa20.79■□□□□ 0.92
SF3A2-203ENST00000587637 FAM163AQ96GL9 167 aaPredicted RBP20.79■□□□□ 0.92
SF3A2-203ENST00000587637 SNRKQ9NRH2 765 aa20.79■□□□□ 0.92
SF3A2-203ENST00000587637 AKAP2Q9Y2D5 859 aa20.79■□□□□ 0.92
SF3A2-203ENST00000587637 GNAI2P04899 355 aa20.78■□□□□ 0.92
SF3A2-203ENST00000587637 CCL5P13501 91 aa20.78■□□□□ 0.92
SF3A2-203ENST00000587637 MAP3K10Q02779 954 aa20.78■□□□□ 0.92
SF3A2-203ENST00000587637 SHROOM1Q2M3G4 852 aaPredicted RBP20.78■□□□□ 0.92
SF3A2-203ENST00000587637 SPTY2D1Q68D10 685 aaPredicted RBP20.78■□□□□ 0.92
SF3A2-203ENST00000587637 GCC1Q96CN9 775 aa20.78■□□□□ 0.92
SF3A2-203ENST00000587637 RAI14Q9P0K7 980 aa20.78■□□□□ 0.92
SF3A2-203ENST00000587637 HDAC5Q9UQL6 1122 aa20.78■□□□□ 0.92
SF3A2-203ENST00000587637 COLQQ9Y215 455 aaPredicted RBP20.78■□□□□ 0.92
SF3A2-203ENST00000587637 ALPK3Q96L96 1907 aa20.78■□□□□ 0.92
SF3A2-203ENST00000587637 H0YGN5 161 aa20.77■□□□□ 0.92
SF3A2-203ENST00000587637 GNRH1P01148 92 aa20.77■□□□□ 0.92
SF3A2-203ENST00000587637 ELNP15502 786 aa20.77■□□□□ 0.92
SF3A2-203ENST00000587637 PRMT2P55345 433 aa20.77■□□□□ 0.92
SF3A2-203ENST00000587637 FCGRTP55899 365 aa20.77■□□□□ 0.92
SF3A2-203ENST00000587637 GORABQ5T7V8 394 aa20.77■□□□□ 0.92
SF3A2-203ENST00000587637 SH3RF3Q8TEJ3 882 aaPredicted RBP20.77■□□□□ 0.92
SF3A2-203ENST00000587637 DBNDD2Q9BQY9 259 aa20.77■□□□□ 0.92
SF3A2-203ENST00000587637 OSBPL5Q9H0X9 879 aaPredicted RBP20.77■□□□□ 0.92
SF3A2-203ENST00000587637 UNC93B1Q9H1C4 597 aa20.77■□□□□ 0.92
SF3A2-203ENST00000587637 ADGRA1Q86SQ6 560 aa20.76■□□□□ 0.91
SF3A2-203ENST00000587637 SLF2Q8IX21 1173 aa20.76■□□□□ 0.91
SF3A2-203ENST00000587637 PCDH10Q9P2E7 1040 aa20.76■□□□□ 0.91
SF3A2-203ENST00000587637 PLXNB2O15031 1838 aa20.76■□□□□ 0.91
SF3A2-203ENST00000587637 RANBP2P49792 3224 aaKnown RBP20.76■□□□□ 0.91
SF3A2-203ENST00000587637 COL2A1P02458 1487 aaPredicted RBP20.75■□□□□ 0.91
SF3A2-203ENST00000587637 CTNND1O60716 968 aaKnown RBP20.75■□□□□ 0.91
SF3A2-203ENST00000587637 FXR1P51114 621 aaKnown RBP eCLIP20.75■□□□□ 0.91
SF3A2-203ENST00000587637 TEX11Q8IYF3 940 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms