RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 DEF6Q9H4E7 631 aa12.05□□□□□ -0.48
RNF43-207ENST00000583753 USP32Q8NFA0 1604 aa12.05□□□□□ -0.48
RNF43-207ENST00000583753 ARHGAP31Q2M1Z3 1444 aa12.05□□□□□ -0.48
RNF43-207ENST00000583753 ENC1O14682 589 aa12.05□□□□□ -0.48
RNF43-207ENST00000583753 MBD4O95243 580 aa12.05□□□□□ -0.48
RNF43-207ENST00000583753 NBPF11Q86T75 865 aa12.05□□□□□ -0.48
RNF43-207ENST00000583753 SMARCC2Q8TAQ2 1214 aa12.05□□□□□ -0.48
RNF43-207ENST00000583753 CTNND2Q9UQB3 1225 aa12.05□□□□□ -0.48
RNF43-207ENST00000583753 GOLGA6L9A6NEM1 432 aa12.04□□□□□ -0.48
RNF43-207ENST00000583753 LONRF2Q1L5Z9 754 aa12.04□□□□□ -0.48
RNF43-207ENST00000583753 CTR9Q6PD62 1173 aa12.04□□□□□ -0.48
RNF43-207ENST00000583753 NUTM2AQ8IVF1 878 aaPredicted RBP12.04□□□□□ -0.48
RNF43-207ENST00000583753 ZNF446Q9NWS9 450 aa12.04□□□□□ -0.48
RNF43-207ENST00000583753 JAG2Q9Y219 1238 aa12.04□□□□□ -0.48
RNF43-207ENST00000583753 TBX22Q9Y458 520 aa12.04□□□□□ -0.48
RNF43-207ENST00000583753 EFCAB8A8MWE9 144 aa12.04□□□□□ -0.48
RNF43-207ENST00000583753 TRIM66O15016 1216 aa12.04□□□□□ -0.48
RNF43-207ENST00000583753 TFRCP02786 760 aaKnown RBP12.04□□□□□ -0.48
RNF43-207ENST00000583753 SCARF1Q14162 830 aa12.04□□□□□ -0.48
RNF43-207ENST00000583753 SLC39A14Q15043 492 aa12.04□□□□□ -0.48
RNF43-207ENST00000583753 ACRBPQ8NEB7 543 aa12.04□□□□□ -0.48
RNF43-207ENST00000583753 ENGASEQ8NFI3 743 aa12.04□□□□□ -0.48
RNF43-207ENST00000583753 APPBP2Q92624 585 aa12.04□□□□□ -0.48
RNF43-207ENST00000583753 VPS54Q9P1Q0 977 aa12.04□□□□□ -0.48
RNF43-207ENST00000583753 SLC4A4Q9Y6R1 1079 aa12.04□□□□□ -0.48
RNF43-207ENST00000583753 A0A1W2PQ27 194 aa12.04□□□□□ -0.48
RNF43-207ENST00000583753 A0A1W2PQ64 194 aa12.04□□□□□ -0.48
RNF43-207ENST00000583753 A0A1W2PQD8 194 aa12.04□□□□□ -0.48
RNF43-207ENST00000583753 WASF1Q92558 559 aa12.04□□□□□ -0.48
RNF43-207ENST00000583753 SUGCTQ9HAC7 445 aa12.04□□□□□ -0.48
RNF43-207ENST00000583753 SENP2Q9HC62 589 aa12.04□□□□□ -0.48
RNF43-207ENST00000583753 ZNHIT6Q9NWK9 470 aaKnown RBP12.04□□□□□ -0.48
RNF43-207ENST00000583753 CCDC148Q8NFR7 591 aa12.03□□□□□ -0.48
RNF43-207ENST00000583753 PLBD2Q8NHP8 589 aa12.03□□□□□ -0.48
RNF43-207ENST00000583753 IPO4Q8TEX9 1081 aaKnown RBP12.03□□□□□ -0.48
RNF43-207ENST00000583753 TANGO6Q9C0B7 1094 aa12.03□□□□□ -0.48
RNF43-207ENST00000583753 ABCA9Q8IUA7 1624 aa12.03□□□□□ -0.48
RNF43-207ENST00000583753 ZNF532Q9HCE3 1301 aa12.03□□□□□ -0.48
RNF43-207ENST00000583753 CDC25AP30304 524 aa12.03□□□□□ -0.48
RNF43-207ENST00000583753 CCDC181Q5TID7 509 aa12.03□□□□□ -0.48
RNF43-207ENST00000583753 TTC19Q6DKK2 380 aaPredicted RBP12.03□□□□□ -0.48
RNF43-207ENST00000583753 SIRT1Q96EB6 747 aa12.03□□□□□ -0.48
RNF43-207ENST00000583753 OSBPL5Q9H0X9 879 aaPredicted RBP12.03□□□□□ -0.48
RNF43-207ENST00000583753 FAN1Q9Y2M0 1017 aa12.03□□□□□ -0.48
RNF43-207ENST00000583753 OVOS2A0A0J9YW53 1432 aa12.03□□□□□ -0.48
RNF43-207ENST00000583753 OVOS2Q6IE36 1432 aa12.03□□□□□ -0.48
RNF43-207ENST00000583753 MACROD2A1Z1Q3 448 aa12.03□□□□□ -0.48
RNF43-207ENST00000583753 ANKRD18BA2A2Z9 1011 aa12.03□□□□□ -0.48
RNF43-207ENST00000583753 PRR29P0C7W0 189 aa12.03□□□□□ -0.48
RNF43-207ENST00000583753 MCM7P33993 719 aa12.03□□□□□ -0.48
RNF43-207ENST00000583753 PLA2G4AP47712 749 aa12.03□□□□□ -0.48
RNF43-207ENST00000583753 NLRP5P59047 1200 aa12.03□□□□□ -0.48
RNF43-207ENST00000583753 MAP3K12Q12852 859 aa12.03□□□□□ -0.48
RNF43-207ENST00000583753 SLC35F6Q8N357 371 aa12.03□□□□□ -0.48
RNF43-207ENST00000583753 MICALL1Q8N3F8 863 aa12.03□□□□□ -0.48
RNF43-207ENST00000583753 POLR3EQ9NVU0 708 aa12.03□□□□□ -0.48
RNF43-207ENST00000583753 FRMPD1Q5SYB0 1578 aa12.02□□□□□ -0.48
RNF43-207ENST00000583753 TEX33O43247 280 aa12.02□□□□□ -0.48
RNF43-207ENST00000583753 ZFYP08048 801 aaPredicted RBP12.02□□□□□ -0.48
RNF43-207ENST00000583753 CASP14P31944 242 aa12.02□□□□□ -0.48
RNF43-207ENST00000583753 UBXN1Q04323 297 aa12.02□□□□□ -0.48
RNF43-207ENST00000583753 RAD51AP2Q09MP3 1159 aa12.02□□□□□ -0.48
RNF43-207ENST00000583753 BICDL1Q6ZP65 573 aa12.02□□□□□ -0.48
RNF43-207ENST00000583753 VSTM4Q8IW00 320 aa12.02□□□□□ -0.48
RNF43-207ENST00000583753 GPR161Q8N6U8 529 aaKnown RBP12.02□□□□□ -0.48
RNF43-207ENST00000583753 CEP131Q9UPN4 1083 aa12.02□□□□□ -0.48
RNF43-207ENST00000583753 USP42Q9H9J4 1324 aaKnown RBP12.02□□□□□ -0.48
RNF43-207ENST00000583753 MED23Q9ULK4 1368 aa12.02□□□□□ -0.49
RNF43-207ENST00000583753 TRIM75PA6NK02 468 aa12.02□□□□□ -0.49
RNF43-207ENST00000583753 CUTAO60888 179 aa12.02□□□□□ -0.49
RNF43-207ENST00000583753 PDE4BQ07343 736 aa12.02□□□□□ -0.49
RNF43-207ENST00000583753 SHC4Q6S5L8 630 aa12.02□□□□□ -0.49
RNF43-207ENST00000583753 AEBP2Q6ZN18 517 aaPredicted RBP12.02□□□□□ -0.49
RNF43-207ENST00000583753 KRT9P35527 623 aa12.02□□□□□ -0.49
RNF43-207ENST00000583753 TXLNAP40222 546 aa12.02□□□□□ -0.49
RNF43-207ENST00000583753 RBL2Q08999 1139 aa12.02□□□□□ -0.49
RNF43-207ENST00000583753 CC2D1AQ6P1N0 951 aaPredicted RBP12.02□□□□□ -0.49
RNF43-207ENST00000583753 HDXQ7Z353 690 aa12.02□□□□□ -0.49
RNF43-207ENST00000583753 MROH7-TTC4A0A0A0MT08 1334 aa12.01□□□□□ -0.49
RNF43-207ENST00000583753 SSBP05455 408 aaKnown RBP eCLIP12.01□□□□□ -0.49
RNF43-207ENST00000583753 GRIN1Q05586 938 aa12.01□□□□□ -0.49
RNF43-207ENST00000583753 SF3A3Q12874 501 aaKnown RBP eCLIP12.01□□□□□ -0.499e-18■■□□□ 11.4
RNF43-207ENST00000583753 ADAM21Q9UKJ8 722 aa12.01□□□□□ -0.49
RNF43-207ENST00000583753 V9GY48 417 aaPredicted RBP12.01□□□□□ -0.49
RNF43-207ENST00000583753 NRKQ7Z2Y5 1582 aa12.01□□□□□ -0.49
RNF43-207ENST00000583753 CDC27P30260 824 aa12.01□□□□□ -0.49
RNF43-207ENST00000583753 RNASE9P60153 205 aaKnown RBP12.01□□□□□ -0.49
RNF43-207ENST00000583753 APOA5Q6Q788 366 aa12.01□□□□□ -0.49
RNF43-207ENST00000583753 RBM43Q6ZSC3 357 aaKnown RBP12.01□□□□□ -0.49
RNF43-207ENST00000583753 USP49Q70CQ1 688 aa12.01□□□□□ -0.49
RNF43-207ENST00000583753 ILDR1Q86SU0 546 aaPredicted RBP12.01□□□□□ -0.49
RNF43-207ENST00000583753 CEP112Q8N8E3 955 aa12.01□□□□□ -0.49
RNF43-207ENST00000583753 TRIM47Q96LD4 638 aa12.01□□□□□ -0.49
RNF43-207ENST00000583753 MAN1B1Q9UKM7 699 aa12.01□□□□□ -0.49
RNF43-207ENST00000583753 PCDHB6Q9Y5E3 794 aa12.01□□□□□ -0.49
RNF43-207ENST00000583753 FHOD1Q9Y613 1164 aa12.01□□□□□ -0.49
RNF43-207ENST00000583753 TADA3O75528 432 aa12□□□□□ -0.49
RNF43-207ENST00000583753 TRIM21P19474 475 aaKnown RBP12□□□□□ -0.49
RNF43-207ENST00000583753 EXOSC10Q01780 885 aaKnown RBP12□□□□□ -0.49
RNF43-207ENST00000583753 NEO1Q92859 1461 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms