RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 DNAAF4Q8WXU2 420 aa11.09□□□□□ -0.63
CDK5RAP3-224ENST00000582275 SYMPKQ92797 1274 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP3-224ENST00000582275 FAM84BQ96KN1 310 aaPredicted RBP11.09□□□□□ -0.63
CDK5RAP3-224ENST00000582275 TAOK2Q9UL54 1235 aa11.09□□□□□ -0.63
CDK5RAP3-224ENST00000582275 ALPK3Q96L96 1907 aa11.09□□□□□ -0.63
CDK5RAP3-224ENST00000582275 MYBBP1AQ9BQG0 1328 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP3-224ENST00000582275 A0A1B0GUL6 1792 aa11.08□□□□□ -0.64
CDK5RAP3-224ENST00000582275 POTEB2H3BUK9 544 aa11.08□□□□□ -0.64
CDK5RAP3-224ENST00000582275 SYN1P17600 705 aa11.08□□□□□ -0.64
CDK5RAP3-224ENST00000582275 GPAT2Q6NUI2 795 aa11.08□□□□□ -0.64
CDK5RAP3-224ENST00000582275 HHIPL2Q6UWX4 724 aa11.08□□□□□ -0.64
CDK5RAP3-224ENST00000582275 TSPYL2Q9H2G4 693 aaPredicted RBP11.08□□□□□ -0.64
CDK5RAP3-224ENST00000582275 HMX1Q9NP08 348 aaPredicted RBP11.08□□□□□ -0.64
CDK5RAP3-224ENST00000582275 PICK1Q9NRD5 415 aa11.08□□□□□ -0.64
CDK5RAP3-224ENST00000582275 ADAMTS8Q9UP79 889 aa11.08□□□□□ -0.64
CDK5RAP3-224ENST00000582275 A0A0G2JLL6 359 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-224ENST00000582275 FOXO4P98177 505 aa11.07□□□□□ -0.64
CDK5RAP3-224ENST00000582275 FLIIQ13045 1269 aa11.07□□□□□ -0.64
CDK5RAP3-224ENST00000582275 CHAF1AQ13111 956 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-224ENST00000582275 FKBP5Q13451 457 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-224ENST00000582275 ZNF697Q5TEC3 545 aa11.07□□□□□ -0.64
CDK5RAP3-224ENST00000582275 APOBEC3HQ6NTF7 200 aaKnown RBP11.07□□□□□ -0.64
CDK5RAP3-224ENST00000582275 LMBR1LQ6UX01 489 aa11.07□□□□□ -0.64
CDK5RAP3-224ENST00000582275 PRRT2Q7Z6L0 340 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-224ENST00000582275 PNMA3Q9UL41 463 aa11.07□□□□□ -0.64
CDK5RAP3-224ENST00000582275 FAM110CQ1W6H9 321 aa11.06□□□□□ -0.64
CDK5RAP3-224ENST00000582275 FBXO33Q7Z6M2 555 aa11.06□□□□□ -0.64
CDK5RAP3-224ENST00000582275 TSPYL6Q8N831 410 aa11.06□□□□□ -0.64
CDK5RAP3-224ENST00000582275 GUCD1Q96NT3 240 aa11.06□□□□□ -0.64
CDK5RAP3-224ENST00000582275 OGDHLQ9ULD0 1010 aa11.06□□□□□ -0.64
CDK5RAP3-224ENST00000582275 MROH5Q6ZUA9 1318 aa11.06□□□□□ -0.64
CDK5RAP3-224ENST00000582275 TWISTNBQ3B726 338 aaPredicted RBP11.05□□□□□ -0.64
CDK5RAP3-224ENST00000582275 GADL1Q6ZQY3 521 aa11.05□□□□□ -0.64
CDK5RAP3-224ENST00000582275 SCYL3Q8IZE3 742 aa11.05□□□□□ -0.64
CDK5RAP3-224ENST00000582275 LBHD1Q9BQE6 289 aaPredicted RBP11.05□□□□□ -0.64
CDK5RAP3-224ENST00000582275 ZHX2Q9Y6X8 837 aa11.05□□□□□ -0.64
CDK5RAP3-224ENST00000582275 AK9Q5TCS8 1911 aa11.05□□□□□ -0.64
CDK5RAP3-224ENST00000582275 DOCK3Q8IZD9 2030 aa11.04□□□□□ -0.64
CDK5RAP3-224ENST00000582275 APAF1O14727 1248 aa11.04□□□□□ -0.64
CDK5RAP3-224ENST00000582275 GCLCP48506 637 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP3-224ENST00000582275 G2E3Q7L622 706 aa11.04□□□□□ -0.64
CDK5RAP3-224ENST00000582275 ANKRD13CQ8N6S4 541 aa11.04□□□□□ -0.64
CDK5RAP3-224ENST00000582275 FAM212AQ96EL1 285 aa11.04□□□□□ -0.64
CDK5RAP3-224ENST00000582275 ZNF594Q96JF6 807 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP3-224ENST00000582275 AGTPBP1Q9UPW5 1226 aa11.04□□□□□ -0.64
CDK5RAP3-224ENST00000582275 AFG3L2Q9Y4W6 797 aa11.04□□□□□ -0.64
CDK5RAP3-224ENST00000582275 CACNA1FO60840 1977 aa11.04□□□□□ -0.64
CDK5RAP3-224ENST00000582275 PTPRAP18433 802 aa11.03□□□□□ -0.64
CDK5RAP3-224ENST00000582275 TCP10Q12799 353 aa11.03□□□□□ -0.64
CDK5RAP3-224ENST00000582275 PABPC4Q13310 644 aaKnown RBP eCLIP11.03□□□□□ -0.64
CDK5RAP3-224ENST00000582275 GRIK5Q16478 980 aa11.03□□□□□ -0.64
CDK5RAP3-224ENST00000582275 TRMT44Q8IYL2 757 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP3-224ENST00000582275 MAFAQ8NHW3 353 aaPredicted RBP11.03□□□□□ -0.64
CDK5RAP3-224ENST00000582275 WDR66Q8TBY9 1149 aa11.03□□□□□ -0.64
CDK5RAP3-224ENST00000582275 IQSEC3Q9UPP2 1182 aaPredicted RBP11.03□□□□□ -0.64
CDK5RAP3-224ENST00000582275 LRRFIP2Q9Y608 721 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP3-224ENST00000582275 COL2A1P02458 1487 aaPredicted RBP11.03□□□□□ -0.64
CDK5RAP3-224ENST00000582275 KIF16BQ96L93 1317 aa11.03□□□□□ -0.64
CDK5RAP3-224ENST00000582275 TTC28Q96AY4 2481 aa11.02□□□□□ -0.64
CDK5RAP3-224ENST00000582275 DDX60LQ5H9U9 1706 aaKnown RBP11.02□□□□□ -0.65
CDK5RAP3-224ENST00000582275 GRM8O00222 908 aa11.02□□□□□ -0.65
CDK5RAP3-224ENST00000582275 CTNND1O60716 968 aaKnown RBP11.02□□□□□ -0.65
CDK5RAP3-224ENST00000582275 COL9A1P20849 921 aa11.02□□□□□ -0.65
CDK5RAP3-224ENST00000582275 ZEB1P37275 1124 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-224ENST00000582275 MDM2Q00987 491 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-224ENST00000582275 UNC80Q8N2C7 3258 aa11.01□□□□□ -0.65
CDK5RAP3-224ENST00000582275 PHF20L1A8MW92 1017 aa11.01□□□□□ -0.65
CDK5RAP3-224ENST00000582275 IFIT1P09914 478 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-224ENST00000582275 COL6A1P12109 1028 aa11.01□□□□□ -0.65
CDK5RAP3-224ENST00000582275 XRCC5P13010 732 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-224ENST00000582275 METTL24Q5JXM2 366 aa11.01□□□□□ -0.65
CDK5RAP3-224ENST00000582275 CDC42EP5Q6NZY7 148 aa11.01□□□□□ -0.65
CDK5RAP3-224ENST00000582275 ZNF579Q8NAF0 562 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-224ENST00000582275 PROCA1Q8NCQ7 364 aaPredicted RBP11.01□□□□□ -0.65
CDK5RAP3-224ENST00000582275 SP7Q8TDD2 431 aaPredicted RBP11.01□□□□□ -0.65
CDK5RAP3-224ENST00000582275 SOCS4Q8WXH5 440 aa11.01□□□□□ -0.65
CDK5RAP3-224ENST00000582275 FAM161BQ96MY7 647 aa11.01□□□□□ -0.65
CDK5RAP3-224ENST00000582275 CDX2Q99626 313 aaPredicted RBP11.01□□□□□ -0.65
CDK5RAP3-224ENST00000582275 TBC1D2Q9BYX2 928 aa11.01□□□□□ -0.65
CDK5RAP3-224ENST00000582275 C9orf78Q9NZ63 289 aaPredicted RBP11.01□□□□□ -0.65
CDK5RAP3-224ENST00000582275 PRKAG2Q9UGJ0 569 aa11.01□□□□□ -0.65
CDK5RAP3-224ENST00000582275 PFASO15067 1338 aa11.01□□□□□ -0.65
CDK5RAP3-224ENST00000582275 ENTPD3O75355 529 aa11□□□□□ -0.65
CDK5RAP3-224ENST00000582275 EPHA10Q5JZY3 1008 aa11□□□□□ -0.65
CDK5RAP3-224ENST00000582275 BEND3Q5T5X7 828 aa11□□□□□ -0.65
CDK5RAP3-224ENST00000582275 MAP3K21Q5TCX8 1036 aa11□□□□□ -0.65
CDK5RAP3-224ENST00000582275 GJD2Q9UKL4 321 aa11□□□□□ -0.65
CDK5RAP3-224ENST00000582275 DAGLAQ9Y4D2 1042 aa11□□□□□ -0.65
CDK5RAP3-224ENST00000582275 TRIM75PA6NK02 468 aa10.99□□□□□ -0.65
CDK5RAP3-224ENST00000582275 ALDH1L1O75891 902 aa10.99□□□□□ -0.65
CDK5RAP3-224ENST00000582275 PDE8BO95263 885 aa10.99□□□□□ -0.65
CDK5RAP3-224ENST00000582275 MAP3K10Q02779 954 aa10.99□□□□□ -0.65
CDK5RAP3-224ENST00000582275 NFIAQ12857 509 aa10.99□□□□□ -0.65
CDK5RAP3-224ENST00000582275 ZSCAN29Q8IWY8 852 aaPredicted RBP10.99□□□□□ -0.65
CDK5RAP3-224ENST00000582275 TSR2Q969E8 191 aaKnown RBP10.99□□□□□ -0.65
CDK5RAP3-224ENST00000582275 NUDT12Q9BQG2 462 aa10.99□□□□□ -0.65
CDK5RAP3-224ENST00000582275 PUS3Q9BZE2 481 aaKnown RBP10.99□□□□□ -0.65
CDK5RAP3-224ENST00000582275 SEMA6BQ9H3T3 888 aa10.99□□□□□ -0.65
CDK5RAP3-224ENST00000582275 USP40Q9NVE5 1235 aa10.99□□□□□ -0.65
CDK5RAP3-224ENST00000582275 FAM198AQ9UFP1 575 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms