RNA–Protein interactions for RNA: ENST00000576872.1

CAMTA2-216, Transcript of calmodulin binding transcription activator 2, human

TSL 2

Gene CAMTA2, Length 985 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAMTA2-216	ENST00000576872	MKRN3	Q13064	507 aa	Known RBP	21.28	■■□□□ 1
CAMTA2-216	ENST00000576872	TMED8	Q6PL24	325 aa	Predicted RBP	21.28	■■□□□ 1
CAMTA2-216	ENST00000576872	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	21.28	■■□□□ 1
CAMTA2-216	ENST00000576872	MIGA2	Q7L4E1	593 aa		21.28	■■□□□ 1
CAMTA2-216	ENST00000576872	GPATCH3	Q96I76	525 aa		21.28	■■□□□ 1
CAMTA2-216	ENST00000576872	ATRNL1	Q5VV63	1379 aa		21.27	■■□□□ 1
CAMTA2-216	ENST00000576872	DDTL	A6NHG4	134 aa	Predicted RBP	21.27	■■□□□ 1
CAMTA2-216	ENST00000576872	DYNLL1	P63167	89 aa	Known RBP	21.27	■■□□□ 1
CAMTA2-216	ENST00000576872	IRX6	P78412	446 aa	Predicted RBP	21.27	■■□□□ 1
CAMTA2-216	ENST00000576872	SPRYD7	Q5W111	196 aa		21.27	■■□□□ 1
CAMTA2-216	ENST00000576872	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	21.27	■■□□□ 1
CAMTA2-216	ENST00000576872	WNK4	Q96J92	1243 aa		21.27	■■□□□ 1
CAMTA2-216	ENST00000576872	CSRNP1	Q96S65	589 aa		21.27	■■□□□ 1
CAMTA2-216	ENST00000576872	BEGAIN	Q9BUH8	593 aa		21.27	■■□□□ 1
CAMTA2-216	ENST00000576872	ZNF341	Q9BYN7	854 aa		21.27	■■□□□ 1
CAMTA2-216	ENST00000576872	CDK5RAP2	Q96SN8	1893 aa		21.26	■□□□□ 0.99
CAMTA2-216	ENST00000576872	PDE6A	P16499	860 aa		21.26	■□□□□ 0.99
CAMTA2-216	ENST00000576872	VGLL4	Q14135	290 aa		21.26	■□□□□ 0.99
CAMTA2-216	ENST00000576872	ANKRD45	Q5TZF3	282 aa		21.26	■□□□□ 0.99
CAMTA2-216	ENST00000576872	TSHZ3	Q63HK5	1081 aa		21.26	■□□□□ 0.99
CAMTA2-216	ENST00000576872	MIGA1	Q8NAN2	632 aa		21.26	■□□□□ 0.99
CAMTA2-216	ENST00000576872	OTUD7A	Q8TE49	926 aa	Predicted RBP	21.26	■□□□□ 0.99
CAMTA2-216	ENST00000576872	WRNIP1	Q96S55	665 aa		21.26	■□□□□ 0.99
CAMTA2-216	ENST00000576872	OSBPL5	Q9H0X9	879 aa	Predicted RBP	21.26	■□□□□ 0.99
CAMTA2-216	ENST00000576872	RWDD1	Q9H446	243 aa	Predicted RBP	21.26	■□□□□ 0.99
CAMTA2-216	ENST00000576872	ELP3	Q9H9T3	547 aa		21.26	■□□□□ 0.99
CAMTA2-216	ENST00000576872	COL2A1	P02458	1487 aa	Predicted RBP	21.26	■□□□□ 0.99
CAMTA2-216	ENST00000576872	SLC9C2	Q5TAH2	1124 aa		21.25	■□□□□ 0.99
CAMTA2-216	ENST00000576872	REM2	Q8IYK8	340 aa	Predicted RBP	21.25	■□□□□ 0.99
CAMTA2-216	ENST00000576872	CSAD	Q9Y600	493 aa		21.25	■□□□□ 0.99
CAMTA2-216	ENST00000576872	FOCAD	Q5VW36	1801 aa		21.25	■□□□□ 0.99
CAMTA2-216	ENST00000576872	IGHD	P01880	384 aa		21.24	■□□□□ 0.99
CAMTA2-216	ENST00000576872	ZBTB48	P10074	688 aa	Predicted RBP	21.24	■□□□□ 0.99
CAMTA2-216	ENST00000576872	GJA5	P36382	358 aa		21.24	■□□□□ 0.99
CAMTA2-216	ENST00000576872	CTCF	P49711	727 aa	Predicted RBP	21.24	■□□□□ 0.99
CAMTA2-216	ENST00000576872	TGFBRAP1	Q8WUH2	860 aa		21.24	■□□□□ 0.99
CAMTA2-216	ENST00000576872	ZBTB47	Q9UFB7	747 aa	Predicted RBP	21.24	■□□□□ 0.99
CAMTA2-216	ENST00000576872	ZNF112	Q9UJU3	913 aa		21.24	■□□□□ 0.99
CAMTA2-216	ENST00000576872	TTC41P	Q6P2S7	1318 aa		21.24	■□□□□ 0.99
CAMTA2-216	ENST00000576872	ZNF532	Q9HCE3	1301 aa		21.24	■□□□□ 0.99
CAMTA2-216	ENST00000576872	TCRBV5S4A2T	A0A5A2	114 aa		21.23	■□□□□ 0.99
CAMTA2-216	ENST00000576872	HSPA8	P11142	646 aa	Known RBP	21.23	■□□□□ 0.99
CAMTA2-216	ENST00000576872	INPP5B	P32019	993 aa		21.23	■□□□□ 0.99
CAMTA2-216	ENST00000576872	CERS3	Q8IU89	383 aa		21.23	■□□□□ 0.99
CAMTA2-216	ENST00000576872	MAPKAPK5	Q8IW41	473 aa		21.23	■□□□□ 0.99
CAMTA2-216	ENST00000576872	SMC5	Q8IY18	1101 aa		21.23	■□□□□ 0.99
CAMTA2-216	ENST00000576872	ZKSCAN4	Q969J2	545 aa	Predicted RBP	21.23	■□□□□ 0.99
CAMTA2-216	ENST00000576872	OPTN	Q96CV9	577 aa		21.23	■□□□□ 0.99
CAMTA2-216	ENST00000576872	SNCAIP	Q9Y6H5	919 aa		21.23	■□□□□ 0.99
CAMTA2-216	ENST00000576872	FLT1	P17948	1338 aa		21.23	■□□□□ 0.99
CAMTA2-216	ENST00000576872	SALL3	Q9BXA9	1300 aa		21.23	■□□□□ 0.99
CAMTA2-216	ENST00000576872	CA12	O43570	354 aa		21.22	■□□□□ 0.99
CAMTA2-216	ENST00000576872	SLURP2	P0DP57	97 aa		21.22	■□□□□ 0.99
CAMTA2-216	ENST00000576872	ADD2	P35612	726 aa		21.22	■□□□□ 0.99
CAMTA2-216	ENST00000576872	MAP3K10	Q02779	954 aa		21.22	■□□□□ 0.99
CAMTA2-216	ENST00000576872	CNKSR2	Q8WXI2	1034 aa		21.22	■□□□□ 0.99
CAMTA2-216	ENST00000576872	RIOK1	Q9BRS2	568 aa	Known RBP	21.22	■□□□□ 0.99
CAMTA2-216	ENST00000576872	LAMB1	P07942	1786 aa		21.22	■□□□□ 0.99
CAMTA2-216	ENST00000576872	MYH7	P12883	1935 aa		21.21	■□□□□ 0.99
CAMTA2-216	ENST00000576872	MX1	P20591	662 aa		21.21	■□□□□ 0.99
CAMTA2-216	ENST00000576872	TM4SF4	P48230	202 aa		21.21	■□□□□ 0.99
CAMTA2-216	ENST00000576872	PI4K2B	Q8TCG2	481 aa		21.21	■□□□□ 0.99
CAMTA2-216	ENST00000576872	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	21.21	■□□□□ 0.99	1e-6	■■■■□ 20.5
CAMTA2-216	ENST00000576872	TSKS	Q9UJT2	592 aa		21.21	■□□□□ 0.99
CAMTA2-216	ENST00000576872	MAGEB6P1	A0A0J9YX57	407 aa		21.2	■□□□□ 0.98
CAMTA2-216	ENST00000576872	MANSC4	A6NHS7	340 aa	Predicted RBP	21.2	■□□□□ 0.98
CAMTA2-216	ENST00000576872	SPDYE5	A6NIY4	337 aa		21.2	■□□□□ 0.98
CAMTA2-216	ENST00000576872	PHF20L1	A8MW92	1017 aa		21.2	■□□□□ 0.98
CAMTA2-216	ENST00000576872	ERC2	O15083	957 aa		21.2	■□□□□ 0.98
CAMTA2-216	ENST00000576872	LBX1	P52954	281 aa		21.2	■□□□□ 0.98
CAMTA2-216	ENST00000576872	SREBF2	Q12772	1141 aa		21.2	■□□□□ 0.98
CAMTA2-216	ENST00000576872	SLFNL1	Q499Z3	407 aa		21.2	■□□□□ 0.98
CAMTA2-216	ENST00000576872	RNF186	Q9NXI6	227 aa		21.2	■□□□□ 0.98
CAMTA2-216	ENST00000576872	SAGE1	Q9NXZ1	904 aa		21.2	■□□□□ 0.98
CAMTA2-216	ENST00000576872	TBC1D12	O60347	775 aa		21.19	■□□□□ 0.98
CAMTA2-216	ENST00000576872	GLRX3	O76003	335 aa	Known RBP	21.19	■□□□□ 0.98
CAMTA2-216	ENST00000576872	CHGB	P05060	677 aa		21.19	■□□□□ 0.98
CAMTA2-216	ENST00000576872	NOL9	Q5SY16	702 aa	Known RBP	21.19	■□□□□ 0.98
CAMTA2-216	ENST00000576872	OTUD5	Q96G74	571 aa		21.19	■□□□□ 0.98
CAMTA2-216	ENST00000576872	DHX36	Q9H2U1	1008 aa	Known RBP	21.19	■□□□□ 0.98
CAMTA2-216	ENST00000576872	SIPA1L1	O43166	1804 aa		21.19	■□□□□ 0.98
CAMTA2-216	ENST00000576872	TRPA1	O75762	1119 aa		21.18	■□□□□ 0.98
CAMTA2-216	ENST00000576872	USP5	P45974	858 aa		21.18	■□□□□ 0.98
CAMTA2-216	ENST00000576872	UBE3C	Q15386	1083 aa		21.18	■□□□□ 0.98
CAMTA2-216	ENST00000576872	B4GALNT3	Q6L9W6	998 aa		21.18	■□□□□ 0.98
CAMTA2-216	ENST00000576872	ERO1B	Q86YB8	467 aa		21.18	■□□□□ 0.98
CAMTA2-216	ENST00000576872	KBTBD3	Q8NAB2	608 aa		21.18	■□□□□ 0.98
CAMTA2-216	ENST00000576872	LNPK	Q9C0E8	428 aa		21.18	■□□□□ 0.98
CAMTA2-216	ENST00000576872	PRDM10	Q9NQV6	1147 aa		21.18	■□□□□ 0.98
CAMTA2-216	ENST00000576872	FAM196B	A6NMK8	535 aa		21.17	■□□□□ 0.98
CAMTA2-216	ENST00000576872	ZSCAN25	Q6NSZ9	544 aa		21.17	■□□□□ 0.98
CAMTA2-216	ENST00000576872	LCORL	Q8N3X6	602 aa		21.17	■□□□□ 0.98
CAMTA2-216	ENST00000576872	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	21.17	■□□□□ 0.98
CAMTA2-216	ENST00000576872	PI4KB	Q9UBF8	816 aa		21.17	■□□□□ 0.98
CAMTA2-216	ENST00000576872	SAP30BP	Q9UHR5	308 aa	Known RBP	21.17	■□□□□ 0.98
CAMTA2-216	ENST00000576872	PALD1	Q9ULE6	856 aa		21.17	■□□□□ 0.98
CAMTA2-216	ENST00000576872	MYH1	P12882	1939 aa		21.17	■□□□□ 0.98
CAMTA2-216	ENST00000576872	INHBE	P58166	350 aa		21.16	■□□□□ 0.98
CAMTA2-216	ENST00000576872	PPIL2	Q13356	520 aa		21.16	■□□□□ 0.98
CAMTA2-216	ENST00000576872	MS4A4A	Q96JQ5	239 aa		21.16	■□□□□ 0.98

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms