RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 NECAB3Q96P71 396 aaPredicted RBP6.75□□□□□ -1.33
TSR1-203ENST00000575049 CORO1BQ9BR76 489 aa6.75□□□□□ -1.33
TSR1-203ENST00000575049 TMPRSS13Q9BYE2 586 aa6.75□□□□□ -1.33
TSR1-203ENST00000575049 CEP41Q9BYV8 373 aa6.75□□□□□ -1.33
TSR1-203ENST00000575049 BCCIPQ9P287 314 aaKnown RBP eCLIP6.75□□□□□ -1.33
TSR1-203ENST00000575049 CHPF2Q9P2E5 772 aa6.75□□□□□ -1.33
TSR1-203ENST00000575049 DDX41Q9UJV9 622 aaKnown RBP6.75□□□□□ -1.33
TSR1-203ENST00000575049 TTF2Q9UNY4 1162 aaKnown RBP6.75□□□□□ -1.33
TSR1-203ENST00000575049 STK10O94804 968 aaKnown RBP6.74□□□□□ -1.33
TSR1-203ENST00000575049 RACK1P63244 317 aaKnown RBP6.74□□□□□ -1.33
TSR1-203ENST00000575049 EXOSC6Q5RKV6 272 aaKnown RBP6.74□□□□□ -1.33
TSR1-203ENST00000575049 HP1BP3Q5SSJ5 553 aaPredicted RBP6.74□□□□□ -1.33
TSR1-203ENST00000575049 ANKRD34AQ69YU3 496 aa6.74□□□□□ -1.33
TSR1-203ENST00000575049 SULF2Q8IWU5 870 aa6.74□□□□□ -1.33
TSR1-203ENST00000575049 ZNF654Q8IZM8 581 aa6.74□□□□□ -1.33
TSR1-203ENST00000575049 TP53INP1Q96A56 240 aa6.74□□□□□ -1.33
TSR1-203ENST00000575049 UBL7Q96S82 380 aaPredicted RBP6.74□□□□□ -1.33
TSR1-203ENST00000575049 PCDH12Q9NPG4 1184 aa6.74□□□□□ -1.33
TSR1-203ENST00000575049 IFT57Q9NWB7 429 aa6.74□□□□□ -1.33
TSR1-203ENST00000575049 MAGEC2Q9UBF1 373 aaPredicted RBP6.74□□□□□ -1.33
TSR1-203ENST00000575049 FAN1Q9Y2M0 1017 aa6.74□□□□□ -1.33
TSR1-203ENST00000575049 ENC1O14682 589 aa6.73□□□□□ -1.33
TSR1-203ENST00000575049 PEX14O75381 377 aa6.73□□□□□ -1.33
TSR1-203ENST00000575049 NUTM2GQ5VZR2 741 aa6.73□□□□□ -1.33
TSR1-203ENST00000575049 FDX2Q6P4F2 183 aa6.73□□□□□ -1.33
TSR1-203ENST00000575049 VPS37DQ86XT2 251 aa6.73□□□□□ -1.33
TSR1-203ENST00000575049 SMG8Q8ND04 991 aaKnown RBP6.73□□□□□ -1.33
TSR1-203ENST00000575049 STK35Q8TDR2 534 aa6.73□□□□□ -1.33
TSR1-203ENST00000575049 SUGCTQ9HAC7 445 aa6.73□□□□□ -1.33
TSR1-203ENST00000575049 CYP4F12Q9HCS2 524 aa6.73□□□□□ -1.33
TSR1-203ENST00000575049 CCDC194A0A1B0GVG4 234 aa6.72□□□□□ -1.33
TSR1-203ENST00000575049 PAGE1O75459 146 aa6.72□□□□□ -1.33
TSR1-203ENST00000575049 CELA3AP09093 270 aa6.72□□□□□ -1.33
TSR1-203ENST00000575049 GSTP1P09211 210 aaKnown RBP6.72□□□□□ -1.33
TSR1-203ENST00000575049 CTSHP09668 335 aa6.72□□□□□ -1.33
TSR1-203ENST00000575049 FGRP09769 529 aa6.72□□□□□ -1.33
TSR1-203ENST00000575049 NME2P22392 152 aa6.72□□□□□ -1.33
TSR1-203ENST00000575049 PREPP48147 710 aa6.72□□□□□ -1.33
TSR1-203ENST00000575049 PDE3AQ14432 1141 aa6.72□□□□□ -1.33
TSR1-203ENST00000575049 NFE2L2Q16236 605 aa6.72□□□□□ -1.33
TSR1-203ENST00000575049 RSPO4Q2I0M5 234 aaPredicted RBP6.72□□□□□ -1.33
TSR1-203ENST00000575049 PLEKHG6Q3KR16 790 aa6.72□□□□□ -1.33
TSR1-203ENST00000575049 ZNF394Q53GI3 561 aa6.72□□□□□ -1.33
TSR1-203ENST00000575049 HSP90AB2PQ58FF8 381 aa6.72□□□□□ -1.33
TSR1-203ENST00000575049 MEI1Q5TIA1 1274 aa6.72□□□□□ -1.33
TSR1-203ENST00000575049 FILIP1Q7Z7B0 1213 aa6.72□□□□□ -1.33
TSR1-203ENST00000575049 PDZD3Q86UT5 571 aa6.72□□□□□ -1.33
TSR1-203ENST00000575049 RPUSD2Q8IZ73 545 aaKnown RBP6.72□□□□□ -1.33
TSR1-203ENST00000575049 MORC4Q8TE76 937 aa6.72□□□□□ -1.33
TSR1-203ENST00000575049 MRFAP1L1Q96HT8 127 aa6.72□□□□□ -1.33
TSR1-203ENST00000575049 FAM46AQ96IP4 442 aaKnown RBP6.72□□□□□ -1.33
TSR1-203ENST00000575049 SART1O43290 800 aaKnown RBP6.71□□□□□ -1.34
TSR1-203ENST00000575049 TIAF1O95411 115 aa6.71□□□□□ -1.34
TSR1-203ENST00000575049 FURINP09958 794 aa6.71□□□□□ -1.34
TSR1-203ENST00000575049 ARNTP27540 789 aa6.71□□□□□ -1.34
TSR1-203ENST00000575049 UVSSAQ2YD98 709 aa6.71□□□□□ -1.34
TSR1-203ENST00000575049 NKAPLQ5M9Q1 402 aa6.71□□□□□ -1.34
TSR1-203ENST00000575049 SV2BQ7L1I2 683 aa6.71□□□□□ -1.34
TSR1-203ENST00000575049 C12orf50Q8NA57 414 aaPredicted RBP6.71□□□□□ -1.34
TSR1-203ENST00000575049 CRELD1Q96HD1 420 aa6.71□□□□□ -1.34
TSR1-203ENST00000575049 EMILIN2Q9BXX0 1053 aa6.71□□□□□ -1.34
TSR1-203ENST00000575049 ZC3H12CQ9C0D7 883 aaKnown RBP6.71□□□□□ -1.34
TSR1-203ENST00000575049 CCDC86Q9H6F5 360 aaKnown RBP6.71□□□□□ -1.34
TSR1-203ENST00000575049 PCDHGB7Q9Y5F8 929 aa6.71□□□□□ -1.34
TSR1-203ENST00000575049 ENPP3O14638 875 aa6.7□□□□□ -1.34
TSR1-203ENST00000575049 ARMC10Q8N2F6 343 aa6.7□□□□□ -1.34
TSR1-203ENST00000575049 UTP4Q969X6 686 aaKnown RBP6.7□□□□□ -1.34
TSR1-203ENST00000575049 IRF2BPLQ9H1B7 796 aa6.7□□□□□ -1.34
TSR1-203ENST00000575049 RAD18Q9NS91 495 aa6.7□□□□□ -1.34
TSR1-203ENST00000575049 KRT82Q9NSB4 513 aa6.7□□□□□ -1.34
TSR1-203ENST00000575049 SAMM50Q9Y512 469 aa6.7□□□□□ -1.34
TSR1-203ENST00000575049 K7ELQ4 463 aaPredicted RBP6.69□□□□□ -1.34
TSR1-203ENST00000575049 AOC2O75106 756 aa6.69□□□□□ -1.34
TSR1-203ENST00000575049 H2AFB1P0C5Y9 115 aa6.69□□□□□ -1.34
TSR1-203ENST00000575049 H2AFB2P0C5Z0 115 aa6.69□□□□□ -1.34
TSR1-203ENST00000575049 ADH5P11766 374 aa6.69□□□□□ -1.34
TSR1-203ENST00000575049 DRD2P14416 443 aa6.69□□□□□ -1.34
TSR1-203ENST00000575049 LIG1P18858 919 aa6.69□□□□□ -1.34
TSR1-203ENST00000575049 BMP6P22004 513 aa6.69□□□□□ -1.34
TSR1-203ENST00000575049 ST13P50502 369 aaKnown RBP6.69□□□□□ -1.34
TSR1-203ENST00000575049 SOX4Q06945 474 aaPredicted RBP6.69□□□□□ -1.34
TSR1-203ENST00000575049 ZNF252P-AS1Q0IIN9 211 aa6.69□□□□□ -1.34
TSR1-203ENST00000575049 TAF1CQ15572 869 aaPredicted RBP6.69□□□□□ -1.34
TSR1-203ENST00000575049 CCDC85BQ15834 202 aaPredicted RBP6.69□□□□□ -1.34
TSR1-203ENST00000575049 PCNX4Q63HM2 1172 aa6.69□□□□□ -1.34
TSR1-203ENST00000575049 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.69□□□□□ -1.34
TSR1-203ENST00000575049 USP48Q86UV5 1035 aa6.69□□□□□ -1.34
TSR1-203ENST00000575049 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.69□□□□□ -1.343e-7■□□□□ 11.2
TSR1-203ENST00000575049 WDR18Q9BV38 432 aa6.69□□□□□ -1.34
TSR1-203ENST00000575049 CBX8Q9HC52 389 aa6.69□□□□□ -1.34
TSR1-203ENST00000575049 USP31Q70CQ4 1352 aa6.69□□□□□ -1.34
TSR1-203ENST00000575049 DYRK3O43781 588 aa6.68□□□□□ -1.34
TSR1-203ENST00000575049 GAS2O43903 313 aaKnown RBP6.68□□□□□ -1.34
TSR1-203ENST00000575049 ZNF862O60290 1169 aa6.68□□□□□ -1.34
TSR1-203ENST00000575049 DNAJC6O75061 913 aa6.68□□□□□ -1.34
TSR1-203ENST00000575049 HNRNPUQ00839 825 aaKnown RBP eCLIP6.68□□□□□ -1.34
TSR1-203ENST00000575049 AKAP4Q5JQC9 854 aa6.68□□□□□ -1.34
TSR1-203ENST00000575049 RASIP1Q5U651 963 aa6.68□□□□□ -1.34
TSR1-203ENST00000575049 MAP1SQ66K74 1059 aaPredicted RBP6.68□□□□□ -1.34
TSR1-203ENST00000575049 SMC5Q8IY18 1101 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 173.5 ms