RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 NECAB2Q7Z6G3 386 aa15.29■□□□□ 0.04
PRPF8-208ENST00000573716 ZSCAN29Q8IWY8 852 aaPredicted RBP15.29■□□□□ 0.04
PRPF8-208ENST00000573716 ZFPM1Q8IX07 1006 aa15.29■□□□□ 0.04
PRPF8-208ENST00000573716 DEFB123Q8N688 67 aa15.29■□□□□ 0.04
PRPF8-208ENST00000573716 DIS3LQ8TF46 1054 aaKnown RBP15.29■□□□□ 0.04
PRPF8-208ENST00000573716 FAM198AQ9UFP1 575 aa15.29■□□□□ 0.04
PRPF8-208ENST00000573716 A0A0G2JLL6 359 aaPredicted RBP15.28■□□□□ 0.04
PRPF8-208ENST00000573716 SLC5A1P13866 664 aa15.28■□□□□ 0.04
PRPF8-208ENST00000573716 Q7L0L9 218 aa15.28■□□□□ 0.04
PRPF8-208ENST00000573716 PRRT2Q7Z6L0 340 aaPredicted RBP15.28■□□□□ 0.04
PRPF8-208ENST00000573716 SCYL3Q8IZE3 742 aa15.28■□□□□ 0.04
PRPF8-208ENST00000573716 ANKRD44Q8N8A2 993 aa15.28■□□□□ 0.04
PRPF8-208ENST00000573716 PXYLP1Q8TE99 480 aa15.28■□□□□ 0.04
PRPF8-208ENST00000573716 COA7Q96BR5 231 aa15.28■□□□□ 0.04
PRPF8-208ENST00000573716 DOCK3Q8IZD9 2030 aa15.27■□□□□ 0.04
PRPF8-208ENST00000573716 PTPRFP10586 1907 aa15.27■□□□□ 0.04
PRPF8-208ENST00000573716 COL6A3P12111 3177 aa15.27■□□□□ 0.04
PRPF8-208ENST00000573716 TRIM75PA6NK02 468 aa15.27■□□□□ 0.04
PRPF8-208ENST00000573716 LDHBP07195 334 aaKnown RBP15.27■□□□□ 0.04
PRPF8-208ENST00000573716 SYN1P17600 705 aa15.27■□□□□ 0.04
PRPF8-208ENST00000573716 PRDX5P30044 214 aa15.27■□□□□ 0.04
PRPF8-208ENST00000573716 MNX1P50219 401 aaPredicted RBP15.27■□□□□ 0.04
PRPF8-208ENST00000573716 WDR63Q8IWG1 891 aa15.27■□□□□ 0.04
PRPF8-208ENST00000573716 ANKRD13CQ8N6S4 541 aa15.27■□□□□ 0.04
PRPF8-208ENST00000573716 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.27■□□□□ 0.04
PRPF8-208ENST00000573716 PAK6Q9NQU5 681 aaPredicted RBP15.27■□□□□ 0.04
PRPF8-208ENST00000573716 LRRFIP2Q9Y608 721 aaKnown RBP15.27■□□□□ 0.04
PRPF8-208ENST00000573716 PTPRAP18433 802 aa15.26■□□□□ 0.03
PRPF8-208ENST00000573716 RGS3P49796 1198 aa15.26■□□□□ 0.03
PRPF8-208ENST00000573716 IRF5Q13568 498 aa15.26■□□□□ 0.03
PRPF8-208ENST00000573716 RABL6Q3YEC7 729 aaPredicted RBP15.26■□□□□ 0.03
PRPF8-208ENST00000573716 DOCK1Q14185 1865 aa15.26■□□□□ 0.03
PRPF8-208ENST00000573716 MYH2Q9UKX2 1941 aa15.25■□□□□ 0.03
PRPF8-208ENST00000573716 KIF16BQ96L93 1317 aa15.25■□□□□ 0.03
PRPF8-208ENST00000573716 PHF20L1A8MW92 1017 aa15.25■□□□□ 0.03
PRPF8-208ENST00000573716 FGFR2P21802 821 aa15.25■□□□□ 0.03
PRPF8-208ENST00000573716 CCDC84Q86UT8 332 aaPredicted RBP15.25■□□□□ 0.03
PRPF8-208ENST00000573716 GDF15Q99988 308 aa15.25■□□□□ 0.03
PRPF8-208ENST00000573716 CRISPLD2Q9H0B8 497 aa15.25■□□□□ 0.03
PRPF8-208ENST00000573716 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.25■□□□□ 0.03
PRPF8-208ENST00000573716 AFG3L2Q9Y4W6 797 aa15.25■□□□□ 0.03
PRPF8-208ENST00000573716 A0A0C4DFX4 3053 aa15.25■□□□□ 0.03
PRPF8-208ENST00000573716 UTYO14607 1347 aa15.24■□□□□ 0.03
PRPF8-208ENST00000573716 SLURP2P0DP57 97 aa15.24■□□□□ 0.03
PRPF8-208ENST00000573716 CAPN2P17655 700 aa15.24■□□□□ 0.03
PRPF8-208ENST00000573716 LPIN2Q92539 896 aa15.24■□□□□ 0.03
PRPF8-208ENST00000573716 SLC45A1Q9Y2W3 748 aa15.24■□□□□ 0.03
PRPF8-208ENST00000573716 PHIPQ8WWQ0 1821 aa15.24■□□□□ 0.03
PRPF8-208ENST00000573716 DDX60LQ5H9U9 1706 aaKnown RBP15.23■□□□□ 0.03
PRPF8-208ENST00000573716 BMP8BP34820 402 aa15.23■□□□□ 0.03
PRPF8-208ENST00000573716 PICALMQ13492 652 aa15.23■□□□□ 0.03
PRPF8-208ENST00000573716 FOXD4L1Q9NU39 408 aa15.23■□□□□ 0.03
PRPF8-208ENST00000573716 GNL3LQ9NVN8 582 aaKnown RBP15.23■□□□□ 0.03
PRPF8-208ENST00000573716 ATRNL1Q5VV63 1379 aa15.23■□□□□ 0.03
PRPF8-208ENST00000573716 EYA2O00167 538 aa15.22■□□□□ 0.03
PRPF8-208ENST00000573716 HMGCRP04035 888 aa15.22■□□□□ 0.03
PRPF8-208ENST00000573716 MAGEA10P43363 369 aaPredicted RBP15.22■□□□□ 0.03
PRPF8-208ENST00000573716 TREML2Q5T2D2 321 aa15.22■□□□□ 0.03
PRPF8-208ENST00000573716 UBE2OQ9C0C9 1292 aaKnown RBP15.22■□□□□ 0.03
PRPF8-208ENST00000573716 NBPF3Q9H094 633 aa15.22■□□□□ 0.03
PRPF8-208ENST00000573716 SIL1Q9H173 461 aa15.22■□□□□ 0.03
PRPF8-208ENST00000573716 PNMA3Q9UL41 463 aa15.22■□□□□ 0.03
PRPF8-208ENST00000573716 AGTPBP1Q9UPW5 1226 aa15.22■□□□□ 0.03
PRPF8-208ENST00000573716 LAMA3Q16787 3333 aa15.21■□□□□ 0.03
PRPF8-208ENST00000573716 CTNND1O60716 968 aaKnown RBP15.21■□□□□ 0.03
PRPF8-208ENST00000573716 ENTPD3O75355 529 aa15.21■□□□□ 0.03
PRPF8-208ENST00000573716 TRIM32Q13049 653 aa15.21■□□□□ 0.03
PRPF8-208ENST00000573716 ATP2B3Q16720 1220 aa15.21■□□□□ 0.03
PRPF8-208ENST00000573716 SH3BP5LQ7L8J4 393 aa15.21■□□□□ 0.03
PRPF8-208ENST00000573716 DZIP1Q86YF9 867 aaKnown RBP15.21■□□□□ 0.03
PRPF8-208ENST00000573716 ANKLE1Q8NAG6 615 aa15.21■□□□□ 0.03
PRPF8-208ENST00000573716 C11orf49Q9H6J7 331 aa15.21■□□□□ 0.03
PRPF8-208ENST00000573716 MRS2Q9HD23 443 aa15.21■□□□□ 0.03
PRPF8-208ENST00000573716 HMX1Q9NP08 348 aaPredicted RBP15.21■□□□□ 0.03
PRPF8-208ENST00000573716 STXBP5LQ9Y2K9 1186 aa15.21■□□□□ 0.03
PRPF8-208ENST00000573716 DDTLA6NHG4 134 aaPredicted RBP15.2■□□□□ 0.02
PRPF8-208ENST00000573716 FAM196BA6NMK8 535 aa15.2■□□□□ 0.02
PRPF8-208ENST00000573716 FAM110CQ1W6H9 321 aa15.2■□□□□ 0.02
PRPF8-208ENST00000573716 GPR153Q6NV75 609 aa15.2■□□□□ 0.02
PRPF8-208ENST00000573716 TDHQ8IZJ6 230 aa15.2■□□□□ 0.02
PRPF8-208ENST00000573716 MTMR10Q9NXD2 777 aa15.2■□□□□ 0.02
PRPF8-208ENST00000573716 DENND2AQ9ULE3 1009 aa15.2■□□□□ 0.02
PRPF8-208ENST00000573716 RPTORQ8N122 1335 aa15.19■□□□□ 0.02
PRPF8-208ENST00000573716 PHKA1P46020 1223 aa15.19■□□□□ 0.02
PRPF8-208ENST00000573716 IDI2Q9BXS1 227 aa15.19■□□□□ 0.02
PRPF8-208ENST00000573716 CEP126Q9P2H0 1117 aa15.19■□□□□ 0.02
PRPF8-208ENST00000573716 ABCF2Q9UG63 623 aa15.19■□□□□ 0.02
PRPF8-208ENST00000573716 ATAD5Q96QE3 1844 aa15.18■□□□□ 0.02
PRPF8-208ENST00000573716 HMGCS2P54868 508 aa15.18■□□□□ 0.02
PRPF8-208ENST00000573716 SPP2Q13103 211 aa15.18■□□□□ 0.02
PRPF8-208ENST00000573716 LRIT3Q3SXY7 679 aa15.18■□□□□ 0.02
PRPF8-208ENST00000573716 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.18■□□□□ 0.02
PRPF8-208ENST00000573716 DDX4Q9NQI0 724 aaKnown RBP15.18■□□□□ 0.02
PRPF8-208ENST00000573716 SALL1Q9NSC2 1324 aa15.17■□□□□ 0.02
PRPF8-208ENST00000573716 LOC285556D6RIA3 1793 aa15.17■□□□□ 0.02
PRPF8-208ENST00000573716 CYP2B6P20813 491 aa15.17■□□□□ 0.02
PRPF8-208ENST00000573716 BTDP43251 543 aa15.17■□□□□ 0.02
PRPF8-208ENST00000573716 RFX5P48382 616 aaPredicted RBP15.17■□□□□ 0.02
PRPF8-208ENST00000573716 GCLCP48506 637 aaPredicted RBP15.17■□□□□ 0.02
PRPF8-208ENST00000573716 PABPC4Q13310 644 aaKnown RBP eCLIP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms