RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 BOLA2Q9H3K6 86 aa16.81■□□□□ 0.28
HERPUD1-210ENST00000565966 AATFQ9NY61 560 aaKnown RBP eCLIP16.81■□□□□ 0.28
HERPUD1-210ENST00000565966 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.81■□□□□ 0.28
HERPUD1-210ENST00000565966 ZBTB48P10074 688 aaPredicted RBP16.8■□□□□ 0.28
HERPUD1-210ENST00000565966 CYP7A1P22680 504 aa16.8■□□□□ 0.28
HERPUD1-210ENST00000565966 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.8■□□□□ 0.28
HERPUD1-210ENST00000565966 MIGA2Q7L4E1 593 aa16.8■□□□□ 0.28
HERPUD1-210ENST00000565966 ADGRA1Q86SQ6 560 aa16.8■□□□□ 0.28
HERPUD1-210ENST00000565966 ZSCAN29Q8IWY8 852 aaPredicted RBP16.8■□□□□ 0.28
HERPUD1-210ENST00000565966 DNAJC2Q99543 621 aaKnown RBP16.8■□□□□ 0.28
HERPUD1-210ENST00000565966 ZNF341Q9BYN7 854 aa16.8■□□□□ 0.28
HERPUD1-210ENST00000565966 DDX4Q9NQI0 724 aaKnown RBP16.8■□□□□ 0.28
HERPUD1-210ENST00000565966 ECHDC1Q9NTX5 307 aa16.8■□□□□ 0.28
HERPUD1-210ENST00000565966 CSADQ9Y600 493 aa16.8■□□□□ 0.28
HERPUD1-210ENST00000565966 CASP8AP2Q9UKL3 1982 aa16.8■□□□□ 0.28
HERPUD1-210ENST00000565966 MYH1P12882 1939 aa16.8■□□□□ 0.28
HERPUD1-210ENST00000565966 GOLIM4O00461 696 aa16.79■□□□□ 0.28
HERPUD1-210ENST00000565966 TM4SF4P48230 202 aa16.79■□□□□ 0.28
HERPUD1-210ENST00000565966 MKRN3Q13064 507 aaKnown RBP16.79■□□□□ 0.28
HERPUD1-210ENST00000565966 TEX11Q8IYF3 940 aa16.79■□□□□ 0.28
HERPUD1-210ENST00000565966 MAGEB6Q8N7X4 407 aa16.79■□□□□ 0.28
HERPUD1-210ENST00000565966 OTUD7AQ8TE49 926 aaPredicted RBP16.79■□□□□ 0.28
HERPUD1-210ENST00000565966 EDC3Q96F86 508 aaKnown RBP16.79■□□□□ 0.28
HERPUD1-210ENST00000565966 WNK4Q96J92 1243 aa16.79■□□□□ 0.28
HERPUD1-210ENST00000565966 HAUS7Q99871 368 aa16.79■□□□□ 0.28
HERPUD1-210ENST00000565966 ZBTB47Q9UFB7 747 aaPredicted RBP16.79■□□□□ 0.28
HERPUD1-210ENST00000565966 DDTLA6NHG4 134 aaPredicted RBP16.78■□□□□ 0.28
HERPUD1-210ENST00000565966 HSPA8P11142 646 aaKnown RBP16.78■□□□□ 0.28
HERPUD1-210ENST00000565966 LBX1P52954 281 aa16.78■□□□□ 0.28
HERPUD1-210ENST00000565966 SREBF2Q12772 1141 aa16.78■□□□□ 0.28
HERPUD1-210ENST00000565966 VGLL4Q14135 290 aa16.78■□□□□ 0.28
HERPUD1-210ENST00000565966 TSHZ3Q63HK5 1081 aa16.78■□□□□ 0.28
HERPUD1-210ENST00000565966 SH3BP5LQ7L8J4 393 aa16.78■□□□□ 0.28
HERPUD1-210ENST00000565966 CERS3Q8IU89 383 aa16.78■□□□□ 0.28
HERPUD1-210ENST00000565966 SH3RF3Q8TEJ3 882 aaPredicted RBP16.78■□□□□ 0.28
HERPUD1-210ENST00000565966 GPATCH3Q96I76 525 aa16.78■□□□□ 0.28
HERPUD1-210ENST00000565966 WRNIP1Q96S55 665 aa16.78■□□□□ 0.28
HERPUD1-210ENST00000565966 ELP3Q9H9T3 547 aa16.78■□□□□ 0.28
HERPUD1-210ENST00000565966 PRDM10Q9NQV6 1147 aa16.78■□□□□ 0.28
HERPUD1-210ENST00000565966 PAG1Q9NWQ8 432 aa16.78■□□□□ 0.28
HERPUD1-210ENST00000565966 ZNF112Q9UJU3 913 aa16.78■□□□□ 0.28
HERPUD1-210ENST00000565966 SALL3Q9BXA9 1300 aa16.77■□□□□ 0.28
HERPUD1-210ENST00000565966 MANSC4A6NHS7 340 aaPredicted RBP16.77■□□□□ 0.28
HERPUD1-210ENST00000565966 INHBEP58166 350 aa16.77■□□□□ 0.28
HERPUD1-210ENST00000565966 OPTNQ96CV9 577 aa16.77■□□□□ 0.28
HERPUD1-210ENST00000565966 OSBPL5Q9H0X9 879 aaPredicted RBP16.77■□□□□ 0.28
HERPUD1-210ENST00000565966 RNF186Q9NXI6 227 aa16.77■□□□□ 0.28
HERPUD1-210ENST00000565966 SAGE1Q9NXZ1 904 aa16.77■□□□□ 0.28
HERPUD1-210ENST00000565966 ATRNL1Q5VV63 1379 aa16.77■□□□□ 0.27
HERPUD1-210ENST00000565966 TTC41PQ6P2S7 1318 aa16.76■□□□□ 0.27
HERPUD1-210ENST00000565966 COL2A1P02458 1487 aaPredicted RBP16.76■□□□□ 0.27
HERPUD1-210ENST00000565966 TRPA1O75762 1119 aa16.76■□□□□ 0.27
HERPUD1-210ENST00000565966 CENPBP07199 599 aaPredicted RBP16.76■□□□□ 0.27
HERPUD1-210ENST00000565966 MAP3K10Q02779 954 aa16.76■□□□□ 0.27
HERPUD1-210ENST00000565966 SLC9C2Q5TAH2 1124 aa16.76■□□□□ 0.27
HERPUD1-210ENST00000565966 B4GALNT3Q6L9W6 998 aa16.76■□□□□ 0.27
HERPUD1-210ENST00000565966 TGFBRAP1Q8WUH2 860 aa16.76■□□□□ 0.27
HERPUD1-210ENST00000565966 ZKSCAN4Q969J2 545 aaPredicted RBP16.76■□□□□ 0.27
HERPUD1-210ENST00000565966 LNPKQ9C0E8 428 aa16.76■□□□□ 0.27
HERPUD1-210ENST00000565966 PDE6AP16499 860 aa16.75■□□□□ 0.27
HERPUD1-210ENST00000565966 MX1P20591 662 aa16.75■□□□□ 0.27
HERPUD1-210ENST00000565966 INPP5BP32019 993 aa16.75■□□□□ 0.27
HERPUD1-210ENST00000565966 GJA5P36382 358 aa16.75■□□□□ 0.27
HERPUD1-210ENST00000565966 DYNLL1P63167 89 aaKnown RBP16.75■□□□□ 0.27
HERPUD1-210ENST00000565966 NUCB1Q02818 461 aa16.75■□□□□ 0.27
HERPUD1-210ENST00000565966 COL13A1Q5TAT6 717 aaPredicted RBP16.75■□□□□ 0.27
HERPUD1-210ENST00000565966 ERO1BQ86YB8 467 aa16.75■□□□□ 0.27
HERPUD1-210ENST00000565966 MIGA1Q8NAN2 632 aa16.75■□□□□ 0.27
HERPUD1-210ENST00000565966 PI4K2BQ8TCG2 481 aa16.75■□□□□ 0.27
HERPUD1-210ENST00000565966 TSKSQ9UJT2 592 aa16.75■□□□□ 0.27
HERPUD1-210ENST00000565966 SNCAIPQ9Y6H5 919 aa16.75■□□□□ 0.27
HERPUD1-210ENST00000565966 TBC1D12O60347 775 aa16.74■□□□□ 0.27
HERPUD1-210ENST00000565966 CHD1LQ86WJ1 897 aa16.74■□□□□ 0.27
HERPUD1-210ENST00000565966 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.74■□□□□ 0.272e-6■□□□□ 10.1
HERPUD1-210ENST00000565966 DHX36Q9H2U1 1008 aaKnown RBP16.74■□□□□ 0.27
HERPUD1-210ENST00000565966 FLT1P17948 1338 aa16.73■□□□□ 0.27
HERPUD1-210ENST00000565966 ZNF532Q9HCE3 1301 aa16.73■□□□□ 0.27
HERPUD1-210ENST00000565966 SPDYE5A6NIY4 337 aa16.73■□□□□ 0.27
HERPUD1-210ENST00000565966 PHF20L1A8MW92 1017 aa16.73■□□□□ 0.27
HERPUD1-210ENST00000565966 ERC2O15083 957 aa16.73■□□□□ 0.27
HERPUD1-210ENST00000565966 GLRX3O76003 335 aaKnown RBP16.73■□□□□ 0.27
HERPUD1-210ENST00000565966 MAPKAPK5Q8IW41 473 aa16.73■□□□□ 0.27
HERPUD1-210ENST00000565966 CNKSR2Q8WXI2 1034 aa16.73■□□□□ 0.27
HERPUD1-210ENST00000565966 PI4KBQ9UBF8 816 aa16.73■□□□□ 0.27
HERPUD1-210ENST00000565966 STAP2Q9UGK3 403 aa16.73■□□□□ 0.27
HERPUD1-210ENST00000565966 DOCK1Q14185 1865 aa16.73■□□□□ 0.27
HERPUD1-210ENST00000565966 SIPA1L1O43166 1804 aa16.73■□□□□ 0.27
HERPUD1-210ENST00000565966 ATAD5Q96QE3 1844 aa16.73■□□□□ 0.27
HERPUD1-210ENST00000565966 MAGEB6P1A0A0J9YX57 407 aa16.72■□□□□ 0.27
HERPUD1-210ENST00000565966 TCRBV5S4A2TA0A5A2 114 aa16.72■□□□□ 0.27
HERPUD1-210ENST00000565966 ALDH1A1P00352 501 aa16.72■□□□□ 0.27
HERPUD1-210ENST00000565966 ADD2P35612 726 aa16.72■□□□□ 0.27
HERPUD1-210ENST00000565966 USP5P45974 858 aa16.72■□□□□ 0.27
HERPUD1-210ENST00000565966 PDE1AP54750 535 aa16.72■□□□□ 0.27
HERPUD1-210ENST00000565966 PPATQ06203 517 aa16.72■□□□□ 0.27
HERPUD1-210ENST00000565966 NOL9Q5SY16 702 aaKnown RBP16.72■□□□□ 0.27
HERPUD1-210ENST00000565966 ZSCAN25Q6NSZ9 544 aa16.72■□□□□ 0.27
HERPUD1-210ENST00000565966 IFNL1Q8IU54 200 aa16.72■□□□□ 0.27
HERPUD1-210ENST00000565966 OTUD5Q96G74 571 aa16.72■□□□□ 0.27
HERPUD1-210ENST00000565966 RIOK1Q9BRS2 568 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms