RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 RASGRF1Q13972 1273 aa25.85■■□□□ 1.73
HERC2-204ENST00000563945 GORABQ5T7V8 394 aa25.85■■□□□ 1.73
HERC2-204ENST00000563945 ERICH6Q7L0X2 663 aa25.85■■□□□ 1.73
HERC2-204ENST00000563945 NEUROD6Q96NK8 337 aa25.85■■□□□ 1.73
HERC2-204ENST00000563945 GAKO14976 1311 aa25.85■■□□□ 1.73
HERC2-204ENST00000563945 A0A1B0GUL7 405 aa25.84■■□□□ 1.73
HERC2-204ENST00000563945 PHF20L1A8MW92 1017 aa25.84■■□□□ 1.73
HERC2-204ENST00000563945 CYP2C8P10632 490 aa25.84■■□□□ 1.73
HERC2-204ENST00000563945 PTPRAP18433 802 aa25.84■■□□□ 1.73
HERC2-204ENST00000563945 BTDP43251 543 aa25.84■■□□□ 1.73
HERC2-204ENST00000563945 MOGSQ13724 837 aa25.84■■□□□ 1.73
HERC2-204ENST00000563945 FAM163AQ96GL9 167 aaPredicted RBP25.84■■□□□ 1.73
HERC2-204ENST00000563945 XAGE2Q96GT9 111 aa25.84■■□□□ 1.73
HERC2-204ENST00000563945 CTNND1O60716 968 aaKnown RBP25.83■■□□□ 1.73
HERC2-204ENST00000563945 CTGFP29279 349 aa25.83■■□□□ 1.73
HERC2-204ENST00000563945 TFCP2Q12800 502 aa25.83■■□□□ 1.73
HERC2-204ENST00000563945 MTFR1Q15390 333 aa25.83■■□□□ 1.73
HERC2-204ENST00000563945 GPAT2Q6NUI2 795 aa25.83■■□□□ 1.73
HERC2-204ENST00000563945 DPF3Q92784 378 aa25.83■■□□□ 1.73
HERC2-204ENST00000563945 ZSWIM8A7E2V4 1837 aa25.83■■□□□ 1.73
HERC2-204ENST00000563945 PDS5AQ29RF7 1337 aaKnown RBP25.83■■□□□ 1.73
HERC2-204ENST00000563945 ADGRA2Q96PE1 1338 aa25.83■■□□□ 1.73
HERC2-204ENST00000563945 MYH2Q9UKX2 1941 aa25.82■■□□□ 1.72
HERC2-204ENST00000563945 CENPFP49454 3210 aa25.82■■□□□ 1.72
HERC2-204ENST00000563945 A0A0G2JLL6 359 aaPredicted RBP25.82■■□□□ 1.72
HERC2-204ENST00000563945 LDHCP07864 332 aa25.82■■□□□ 1.72
HERC2-204ENST00000563945 PRRT2Q7Z6L0 340 aaPredicted RBP25.82■■□□□ 1.72
HERC2-204ENST00000563945 ARHGAP45Q92619 1136 aa25.82■■□□□ 1.72
HERC2-204ENST00000563945 RARSP54136 660 aaKnown RBP25.81■■□□□ 1.72
HERC2-204ENST00000563945 GSTO1P78417 241 aa25.81■■□□□ 1.72
HERC2-204ENST00000563945 SMCR8Q8TEV9 937 aaPredicted RBP25.81■■□□□ 1.72
HERC2-204ENST00000563945 RNF208Q9H0X6 261 aa25.81■■□□□ 1.72
HERC2-204ENST00000563945 AFG3L2Q9Y4W6 797 aa25.81■■□□□ 1.72
HERC2-204ENST00000563945 MROH7-TTC4A0A0A0MT08 1334 aa25.81■■□□□ 1.72
HERC2-204ENST00000563945 DDTLA6NHG4 134 aaPredicted RBP25.8■■□□□ 1.72
HERC2-204ENST00000563945 IPO8O15397 1037 aaKnown RBP25.8■■□□□ 1.72
HERC2-204ENST00000563945 BCRP11274 1271 aa25.8■■□□□ 1.72
HERC2-204ENST00000563945 CCL5P13501 91 aa25.8■■□□□ 1.72
HERC2-204ENST00000563945 PRKCZQ05513 592 aa25.8■■□□□ 1.72
HERC2-204ENST00000563945 SH3BP5LQ7L8J4 393 aa25.8■■□□□ 1.72
HERC2-204ENST00000563945 SLAIN1Q8ND83 568 aa25.8■■□□□ 1.72
HERC2-204ENST00000563945 COLQQ9Y215 455 aaPredicted RBP25.8■■□□□ 1.72
HERC2-204ENST00000563945 SLC45A1Q9Y2W3 748 aa25.8■■□□□ 1.72
HERC2-204ENST00000563945 TRIM75PA6NK02 468 aa25.79■■□□□ 1.72
HERC2-204ENST00000563945 GJB1P08034 283 aa25.79■■□□□ 1.72
HERC2-204ENST00000563945 MAP3K10Q02779 954 aa25.79■■□□□ 1.72
HERC2-204ENST00000563945 MECOMQ03112 1051 aa25.79■■□□□ 1.72
HERC2-204ENST00000563945 GPR75-ASB3A0A0A6YYF3 556 aa25.78■■□□□ 1.72
HERC2-204ENST00000563945 H0YGN5 161 aa25.78■■□□□ 1.72
HERC2-204ENST00000563945 G3BP1Q13283 466 aaKnown RBP eCLIP25.78■■□□□ 1.72
HERC2-204ENST00000563945 HTATIP2Q9BUP3 242 aa25.78■■□□□ 1.72
HERC2-204ENST00000563945 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.78■■□□□ 1.72
HERC2-204ENST00000563945 DDX4Q9NQI0 724 aaKnown RBP25.78■■□□□ 1.72
HERC2-204ENST00000563945 RAI14Q9P0K7 980 aa25.78■■□□□ 1.72
HERC2-204ENST00000563945 ATRNL1Q5VV63 1379 aa25.78■■□□□ 1.72
HERC2-204ENST00000563945 MAP4K4O95819 1239 aaPredicted RBP25.77■■□□□ 1.72
HERC2-204ENST00000563945 GJA8P48165 433 aa25.77■■□□□ 1.72
HERC2-204ENST00000563945 NOL10Q9BSC4 688 aaKnown RBP25.77■■□□□ 1.72
HERC2-204ENST00000563945 CEP290O15078 2479 aa25.77■■□□□ 1.72
HERC2-204ENST00000563945 DOCK2Q92608 1830 aa25.77■■□□□ 1.72
HERC2-204ENST00000563945 TNPO2O14787 897 aaKnown RBP25.76■■□□□ 1.71
HERC2-204ENST00000563945 GNAI2P04899 355 aa25.76■■□□□ 1.71
HERC2-204ENST00000563945 MTX1Q13505 466 aa25.76■■□□□ 1.71
HERC2-204ENST00000563945 SPATA5Q8NB90 893 aa25.76■■□□□ 1.71
HERC2-204ENST00000563945 PNMA3Q9UL41 463 aa25.76■■□□□ 1.71
HERC2-204ENST00000563945 MKI67P46013 3256 aaKnown RBP25.76■■□□□ 1.71
HERC2-204ENST00000563945 ADCY3O60266 1144 aa25.75■■□□□ 1.71
HERC2-204ENST00000563945 TBC1D12O60347 775 aa25.75■■□□□ 1.71
HERC2-204ENST00000563945 HMG20BQ9P0W2 317 aa25.75■■□□□ 1.71
HERC2-204ENST00000563945 GABRQQ9UN88 632 aa25.75■■□□□ 1.71
HERC2-204ENST00000563945 RFX7Q2KHR2 1363 aa25.74■■□□□ 1.71
HERC2-204ENST00000563945 NPM3O75607 178 aaKnown RBP25.74■■□□□ 1.71
HERC2-204ENST00000563945 FXR1P51114 621 aaKnown RBP eCLIP25.74■■□□□ 1.71
HERC2-204ENST00000563945 FRAT1Q92837 279 aaPredicted RBP25.74■■□□□ 1.71
HERC2-204ENST00000563945 COA7Q96BR5 231 aa25.74■■□□□ 1.71
HERC2-204ENST00000563945 SHISA4Q96DD7 197 aa25.74■■□□□ 1.71
HERC2-204ENST00000563945 OSBPL5Q9H0X9 879 aaPredicted RBP25.74■■□□□ 1.71
HERC2-204ENST00000563945 LRP2BPQ9P2M1 347 aa25.74■■□□□ 1.71
HERC2-204ENST00000563945 TAOK2Q9UL54 1235 aa25.74■■□□□ 1.71
HERC2-204ENST00000563945 AGTPBP1Q9UPW5 1226 aa25.74■■□□□ 1.71
HERC2-204ENST00000563945 UQCRFS1P1P0C7P4 283 aa25.73■■□□□ 1.71
HERC2-204ENST00000563945 SLURP2P0DP57 97 aa25.73■■□□□ 1.71
HERC2-204ENST00000563945 FLT3LGP49771 235 aa25.73■■□□□ 1.71
HERC2-204ENST00000563945 RHBDL3P58872 404 aa25.73■■□□□ 1.71
HERC2-204ENST00000563945 TBC1D9Q6ZT07 1266 aa25.73■■□□□ 1.71
HERC2-204ENST00000563945 PABPC4Q13310 644 aaKnown RBP eCLIP25.72■■□□□ 1.71
HERC2-204ENST00000563945 U2AF1L4Q8WU68 220 aaKnown RBP25.72■■□□□ 1.71
HERC2-204ENST00000563945 NSUN4Q96CB9 384 aaKnown RBP25.72■■□□□ 1.71
HERC2-204ENST00000563945 NR2E3Q9Y5X4 410 aa25.72■■□□□ 1.71
HERC2-204ENST00000563945 CCDC84Q86UT8 332 aaPredicted RBP25.71■■□□□ 1.71
HERC2-204ENST00000563945 TEX11Q8IYF3 940 aa25.71■■□□□ 1.71
HERC2-204ENST00000563945 ANKRD13CQ8N6S4 541 aa25.71■■□□□ 1.71
HERC2-204ENST00000563945 PXYLP1Q8TE99 480 aa25.71■■□□□ 1.71
HERC2-204ENST00000563945 TBC1D2Q9BYX2 928 aa25.71■■□□□ 1.71
HERC2-204ENST00000563945 UNC93B1Q9H1C4 597 aa25.71■■□□□ 1.71
HERC2-204ENST00000563945 FAM196BA6NMK8 535 aa25.7■■□□□ 1.7
HERC2-204ENST00000563945 TFRCP02786 760 aaKnown RBP25.7■■□□□ 1.7
HERC2-204ENST00000563945 CAPN2P17655 700 aa25.7■■□□□ 1.7
HERC2-204ENST00000563945 SPP2Q13103 211 aa25.7■■□□□ 1.7
HERC2-204ENST00000563945 PI16Q6UXB8 463 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms