RNA–Protein interactions for RNA: ENST00000563673.5

FANCA-213, Transcript of FA complementation group A, humanhuman

TSL 1 (best) BASIC

Gene FANCA, Length 1,694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-213ENST00000563673 ELP3Q9H9T3 547 aa18.22■□□□□ 0.51
FANCA-213ENST00000563673 CSADQ9Y600 493 aa18.22■□□□□ 0.51
FANCA-213ENST00000563673 HSPA8P11142 646 aaKnown RBP18.22■□□□□ 0.51
FANCA-213ENST00000563673 LBX1P52954 281 aa18.22■□□□□ 0.51
FANCA-213ENST00000563673 VGLL4Q14135 290 aa18.22■□□□□ 0.51
FANCA-213ENST00000563673 TMED8Q6PL24 325 aaPredicted RBP18.22■□□□□ 0.51
FANCA-213ENST00000563673 SH3BP5LQ7L8J4 393 aa18.22■□□□□ 0.51
FANCA-213ENST00000563673 EXOC6Q8TAG9 804 aa18.22■□□□□ 0.51
FANCA-213ENST00000563673 WNK4Q96J92 1243 aa18.22■□□□□ 0.51
FANCA-213ENST00000563673 MAST2Q6P0Q8 1798 aa18.21■□□□□ 0.51
FANCA-213ENST00000563673 DDTLA6NHG4 134 aaPredicted RBP18.21■□□□□ 0.51
FANCA-213ENST00000563673 HDAC1Q13547 482 aaPredicted RBP18.21■□□□□ 0.51
FANCA-213ENST00000563673 HAUS7Q99871 368 aa18.21■□□□□ 0.51
FANCA-213ENST00000563673 ECHDC1Q9NTX5 307 aa18.21■□□□□ 0.51
FANCA-213ENST00000563673 PAG1Q9NWQ8 432 aa18.21■□□□□ 0.51
FANCA-213ENST00000563673 TSKSQ9UJT2 592 aa18.21■□□□□ 0.51
FANCA-213ENST00000563673 SREBF2Q12772 1141 aa18.2■□□□□ 0.5
FANCA-213ENST00000563673 COL13A1Q5TAT6 717 aaPredicted RBP18.2■□□□□ 0.5
FANCA-213ENST00000563673 OPTNQ96CV9 577 aa18.2■□□□□ 0.5
FANCA-213ENST00000563673 EDC3Q96F86 508 aaKnown RBP18.2■□□□□ 0.5
FANCA-213ENST00000563673 PRDM10Q9NQV6 1147 aa18.2■□□□□ 0.5
FANCA-213ENST00000563673 RNF186Q9NXI6 227 aa18.2■□□□□ 0.5
FANCA-213ENST00000563673 TM4SF4P48230 202 aa18.19■□□□□ 0.5
FANCA-213ENST00000563673 SLC9C2Q5TAH2 1124 aa18.19■□□□□ 0.5
FANCA-213ENST00000563673 MIGA1Q8NAN2 632 aa18.19■□□□□ 0.5
FANCA-213ENST00000563673 ZKSCAN4Q969J2 545 aaPredicted RBP18.19■□□□□ 0.5
FANCA-213ENST00000563673 GPATCH3Q96I76 525 aa18.19■□□□□ 0.5
FANCA-213ENST00000563673 OSBPL5Q9H0X9 879 aaPredicted RBP18.19■□□□□ 0.5
FANCA-213ENST00000563673 SAGE1Q9NXZ1 904 aa18.19■□□□□ 0.5
FANCA-213ENST00000563673 ATRNL1Q5VV63 1379 aa18.19■□□□□ 0.5
FANCA-213ENST00000563673 MANSC4A6NHS7 340 aaPredicted RBP18.18■□□□□ 0.5
FANCA-213ENST00000563673 TRPA1O75762 1119 aa18.18■□□□□ 0.5
FANCA-213ENST00000563673 GJA5P36382 358 aa18.18■□□□□ 0.5
FANCA-213ENST00000563673 DYNLL1P63167 89 aaKnown RBP18.18■□□□□ 0.5
FANCA-213ENST00000563673 CERS3Q8IU89 383 aa18.18■□□□□ 0.5
FANCA-213ENST00000563673 GCC1Q96CN9 775 aa18.18■□□□□ 0.5
FANCA-213ENST00000563673 ZNF112Q9UJU3 913 aa18.18■□□□□ 0.5
FANCA-213ENST00000563673 SNCAIPQ9Y6H5 919 aa18.18■□□□□ 0.5
FANCA-213ENST00000563673 MYO5AQ9Y4I1 1855 aaKnown RBP18.18■□□□□ 0.5
FANCA-213ENST00000563673 PDE6AP16499 860 aa18.18■□□□□ 0.5
FANCA-213ENST00000563673 INPP5BP32019 993 aa18.18■□□□□ 0.5
FANCA-213ENST00000563673 TGFBRAP1Q8WUH2 860 aa18.18■□□□□ 0.5
FANCA-213ENST00000563673 CNKSR2Q8WXI2 1034 aa18.18■□□□□ 0.5
FANCA-213ENST00000563673 OTOFQ9HC10 1997 aa18.17■□□□□ 0.5
FANCA-213ENST00000563673 INHBEP58166 350 aa18.17■□□□□ 0.5
FANCA-213ENST00000563673 MAP3K10Q02779 954 aa18.17■□□□□ 0.5
FANCA-213ENST00000563673 ZBTB47Q9UFB7 747 aaPredicted RBP18.17■□□□□ 0.5
FANCA-213ENST00000563673 FLT1P17948 1338 aa18.17■□□□□ 0.5
FANCA-213ENST00000563673 SPDYE5A6NIY4 337 aa18.16■□□□□ 0.5
FANCA-213ENST00000563673 ANKRD45Q5TZF3 282 aa18.16■□□□□ 0.5
FANCA-213ENST00000563673 TSHZ3Q63HK5 1081 aa18.16■□□□□ 0.5
FANCA-213ENST00000563673 ERO1BQ86YB8 467 aa18.16■□□□□ 0.5
FANCA-213ENST00000563673 MAPKAPK5Q8IW41 473 aa18.16■□□□□ 0.5
FANCA-213ENST00000563673 OTUD5Q96G74 571 aa18.16■□□□□ 0.5
FANCA-213ENST00000563673 RWDD1Q9H446 243 aaPredicted RBP18.16■□□□□ 0.5
FANCA-213ENST00000563673 DOCK2Q92608 1830 aa18.16■□□□□ 0.5
FANCA-213ENST00000563673 COL2A1P02458 1487 aaPredicted RBP18.16■□□□□ 0.5
FANCA-213ENST00000563673 AK9Q5TCS8 1911 aa18.16■□□□□ 0.5
FANCA-213ENST00000563673 ZNF532Q9HCE3 1301 aa18.16■□□□□ 0.5
FANCA-213ENST00000563673 PHF20L1A8MW92 1017 aa18.15■□□□□ 0.5
FANCA-213ENST00000563673 SLURP2P0DP57 97 aa18.15■□□□□ 0.5
FANCA-213ENST00000563673 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.15■□□□□ 0.52e-7■■■■□ 20.7
FANCA-213ENST00000563673 DHX36Q9H2U1 1008 aaKnown RBP18.15■□□□□ 0.5
FANCA-213ENST00000563673 TCRBV5S4A2TA0A5A2 114 aa18.15■□□□□ 0.5
FANCA-213ENST00000563673 TBC1D12O60347 775 aa18.15■□□□□ 0.5
FANCA-213ENST00000563673 NOL9Q5SY16 702 aaKnown RBP18.15■□□□□ 0.5
FANCA-213ENST00000563673 RIOK1Q9BRS2 568 aaKnown RBP18.15■□□□□ 0.5
FANCA-213ENST00000563673 TTC41PQ6P2S7 1318 aa18.14■□□□□ 0.49
FANCA-213ENST00000563673 MAGEB6P1A0A0J9YX57 407 aa18.14■□□□□ 0.49
FANCA-213ENST00000563673 IFNL1Q8IU54 200 aa18.14■□□□□ 0.49
FANCA-213ENST00000563673 OTUD7AQ8TE49 926 aaPredicted RBP18.14■□□□□ 0.49
FANCA-213ENST00000563673 MS4A4AQ96JQ5 239 aa18.14■□□□□ 0.49
FANCA-213ENST00000563673 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.14■□□□□ 0.49
FANCA-213ENST00000563673 ADD2P35612 726 aa18.13■□□□□ 0.49
FANCA-213ENST00000563673 USP5P45974 858 aa18.13■□□□□ 0.49
FANCA-213ENST00000563673 GTF2A2P52657 109 aa18.13■□□□□ 0.49
FANCA-213ENST00000563673 PPATQ06203 517 aa18.13■□□□□ 0.49
FANCA-213ENST00000563673 PI4KBQ9UBF8 816 aa18.13■□□□□ 0.49
FANCA-213ENST00000563673 TESPA1A2RU30 521 aaPredicted RBP18.12■□□□□ 0.49
FANCA-213ENST00000563673 IRF6O14896 467 aa18.12■□□□□ 0.49
FANCA-213ENST00000563673 ERC2O15083 957 aa18.12■□□□□ 0.49
FANCA-213ENST00000563673 ALDH1A1P00352 501 aa18.12■□□□□ 0.49
FANCA-213ENST00000563673 MX1P20591 662 aa18.12■□□□□ 0.49
FANCA-213ENST00000563673 IRX6P78412 446 aaPredicted RBP18.12■□□□□ 0.49
FANCA-213ENST00000563673 PPIL2Q13356 520 aa18.12■□□□□ 0.49
FANCA-213ENST00000563673 HERC5Q9UII4 1024 aaKnown RBP18.12■□□□□ 0.49
FANCA-213ENST00000563673 PALD1Q9ULE6 856 aa18.12■□□□□ 0.49
FANCA-213ENST00000563673 FAM196BA6NMK8 535 aa18.12■□□□□ 0.49
FANCA-213ENST00000563673 IGF2BP3O00425 579 aaKnown RBP eCLIP18.12■□□□□ 0.49
FANCA-213ENST00000563673 CTNND1O60716 968 aaKnown RBP18.12■□□□□ 0.49
FANCA-213ENST00000563673 TBC1D8O95759 1140 aa18.12■□□□□ 0.49
FANCA-213ENST00000563673 IGHDP01880 384 aa18.12■□□□□ 0.49
FANCA-213ENST00000563673 UBE3CQ15386 1083 aa18.12■□□□□ 0.49
FANCA-213ENST00000563673 SLFNL1Q499Z3 407 aa18.12■□□□□ 0.49
FANCA-213ENST00000563673 ZSCAN25Q6NSZ9 544 aa18.12■□□□□ 0.49
FANCA-213ENST00000563673 SMC5Q8IY18 1101 aa18.12■□□□□ 0.49
FANCA-213ENST00000563673 SCYL3Q8IZE3 742 aa18.12■□□□□ 0.49
FANCA-213ENST00000563673 PI4K2BQ8TCG2 481 aa18.12■□□□□ 0.49
FANCA-213ENST00000563673 SAP30BPQ9UHR5 308 aaKnown RBP18.12■□□□□ 0.49
FANCA-213ENST00000563673 CCL15-CCL14A0A0B4J2E2 113 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms