RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 XAGE2Q96GT9 111 aa16.07■□□□□ 0.16
SF3B3-202ENST00000562722 NEUROD6Q96NK8 337 aa16.07■□□□□ 0.16
SF3B3-202ENST00000562722 IDI2Q9BXS1 227 aa16.07■□□□□ 0.16
SF3B3-202ENST00000562722 BIN2Q9UBW5 565 aaPredicted RBP16.07■□□□□ 0.16
SF3B3-202ENST00000562722 GAKO14976 1311 aa16.07■□□□□ 0.16
SF3B3-202ENST00000562722 MYPNQ86TC9 1320 aa16.07■□□□□ 0.16
SF3B3-202ENST00000562722 CTGFP29279 349 aa16.06■□□□□ 0.16
SF3B3-202ENST00000562722 MOGSQ13724 837 aa16.06■□□□□ 0.16
SF3B3-202ENST00000562722 ERICH6Q7L0X2 663 aa16.06■□□□□ 0.16
SF3B3-202ENST00000562722 FASTKD5Q7L8L6 764 aaKnown RBP16.06■□□□□ 0.16
SF3B3-202ENST00000562722 ATRNL1Q5VV63 1379 aa16.05■□□□□ 0.16
SF3B3-202ENST00000562722 MROH7-TTC4A0A0A0MT08 1334 aa16.05■□□□□ 0.16
SF3B3-202ENST00000562722 PDS5AQ29RF7 1337 aaKnown RBP16.05■□□□□ 0.16
SF3B3-202ENST00000562722 ADGRA2Q96PE1 1338 aa16.05■□□□□ 0.16
SF3B3-202ENST00000562722 PHF20L1A8MW92 1017 aa16.05■□□□□ 0.16
SF3B3-202ENST00000562722 PTPRAP18433 802 aa16.05■□□□□ 0.16
SF3B3-202ENST00000562722 GRK4P32298 578 aa16.05■□□□□ 0.16
SF3B3-202ENST00000562722 FCGRTP55899 365 aa16.05■□□□□ 0.16
SF3B3-202ENST00000562722 MTFR1Q15390 333 aa16.05■□□□□ 0.16
SF3B3-202ENST00000562722 GPAT2Q6NUI2 795 aa16.05■□□□□ 0.16
SF3B3-202ENST00000562722 SH3BP5LQ7L8J4 393 aa16.05■□□□□ 0.16
SF3B3-202ENST00000562722 BRCA2P51587 3418 aa16.05■□□□□ 0.16
SF3B3-202ENST00000562722 DOCK2Q92608 1830 aa16.04■□□□□ 0.16
SF3B3-202ENST00000562722 A0A0G2JLL6 359 aaPredicted RBP16.04■□□□□ 0.16
SF3B3-202ENST00000562722 DDTLA6NHG4 134 aaPredicted RBP16.04■□□□□ 0.16
SF3B3-202ENST00000562722 TRIM75PA6NK02 468 aa16.04■□□□□ 0.16
SF3B3-202ENST00000562722 MECOMQ03112 1051 aa16.04■□□□□ 0.16
SF3B3-202ENST00000562722 PRRT2Q7Z6L0 340 aaPredicted RBP16.04■□□□□ 0.16
SF3B3-202ENST00000562722 SMCR8Q8TEV9 937 aaPredicted RBP16.04■□□□□ 0.16
SF3B3-202ENST00000562722 ARHGAP45Q92619 1136 aa16.04■□□□□ 0.16
SF3B3-202ENST00000562722 FRAT1Q92837 279 aaPredicted RBP16.04■□□□□ 0.16
SF3B3-202ENST00000562722 DDX4Q9NQI0 724 aaKnown RBP16.04■□□□□ 0.16
SF3B3-202ENST00000562722 MKI67P46013 3256 aaKnown RBP16.04■□□□□ 0.16
SF3B3-202ENST00000562722 RFX7Q2KHR2 1363 aa16.03■□□□□ 0.16
SF3B3-202ENST00000562722 ZBTB22O15209 634 aa16.03■□□□□ 0.16
SF3B3-202ENST00000562722 IPO8O15397 1037 aaKnown RBP16.03■□□□□ 0.16
SF3B3-202ENST00000562722 CTNND1O60716 968 aaKnown RBP16.03■□□□□ 0.16
SF3B3-202ENST00000562722 UBXN2AP68543 259 aa16.03■□□□□ 0.16
SF3B3-202ENST00000562722 GSTO1P78417 241 aa16.03■□□□□ 0.16
SF3B3-202ENST00000562722 PRKCZQ05513 592 aa16.03■□□□□ 0.16
SF3B3-202ENST00000562722 NKX2-3Q8TAU0 364 aa16.03■□□□□ 0.16
SF3B3-202ENST00000562722 FAM163AQ96GL9 167 aaPredicted RBP16.03■□□□□ 0.16
SF3B3-202ENST00000562722 RAI14Q9P0K7 980 aa16.03■□□□□ 0.16
SF3B3-202ENST00000562722 AFG3L2Q9Y4W6 797 aa16.03■□□□□ 0.16
SF3B3-202ENST00000562722 MYH2Q9UKX2 1941 aa16.03■□□□□ 0.16
SF3B3-202ENST00000562722 GNAI2P04899 355 aa16.02■□□□□ 0.16
SF3B3-202ENST00000562722 SLURP2P0DP57 97 aa16.02■□□□□ 0.16
SF3B3-202ENST00000562722 BCRP11274 1271 aa16.02■□□□□ 0.16
SF3B3-202ENST00000562722 G3BP1Q13283 466 aaKnown RBP eCLIP16.02■□□□□ 0.165e-8■■□□□ 13
SF3B3-202ENST00000562722 SPATA5Q8NB90 893 aa16.02■□□□□ 0.16
SF3B3-202ENST00000562722 RNF208Q9H0X6 261 aa16.02■□□□□ 0.16
SF3B3-202ENST00000562722 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.02■□□□□ 0.16
SF3B3-202ENST00000562722 HMG20BQ9P0W2 317 aa16.02■□□□□ 0.16
SF3B3-202ENST00000562722 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.02■□□□□ 0.16
SF3B3-202ENST00000562722 GPR75-ASB3A0A0A6YYF3 556 aa16.01■□□□□ 0.15
SF3B3-202ENST00000562722 H0YGN5 161 aa16.01■□□□□ 0.15
SF3B3-202ENST00000562722 LDHCP07864 332 aa16.01■□□□□ 0.15
SF3B3-202ENST00000562722 CCL5P13501 91 aa16.01■□□□□ 0.15
SF3B3-202ENST00000562722 MTX1Q13505 466 aa16.01■□□□□ 0.15
SF3B3-202ENST00000562722 PI16Q6UXB8 463 aa16.01■□□□□ 0.15
SF3B3-202ENST00000562722 TBC1D9Q6ZT07 1266 aa16.01■□□□□ 0.15
SF3B3-202ENST00000562722 CCDC84Q86UT8 332 aaPredicted RBP16.01■□□□□ 0.15
SF3B3-202ENST00000562722 DPF3Q92784 378 aa16.01■□□□□ 0.15
SF3B3-202ENST00000562722 COLQQ9Y215 455 aaPredicted RBP16.01■□□□□ 0.15
SF3B3-202ENST00000562722 FAM196BA6NMK8 535 aa16■□□□□ 0.15
SF3B3-202ENST00000562722 CCER2I3L3R5 266 aa16■□□□□ 0.15
SF3B3-202ENST00000562722 TNPO2O14787 897 aaKnown RBP16■□□□□ 0.15
SF3B3-202ENST00000562722 TRIM27P14373 513 aa16■□□□□ 0.15
SF3B3-202ENST00000562722 RHBDL3P58872 404 aa16■□□□□ 0.15
SF3B3-202ENST00000562722 SLAIN1Q8ND83 568 aa16■□□□□ 0.15
SF3B3-202ENST00000562722 CLUAP1Q96AJ1 413 aa16■□□□□ 0.15
SF3B3-202ENST00000562722 SHISA4Q96DD7 197 aa16■□□□□ 0.15
SF3B3-202ENST00000562722 NOL10Q9BSC4 688 aaKnown RBP16■□□□□ 0.15
SF3B3-202ENST00000562722 LRP2BPQ9P2M1 347 aa16■□□□□ 0.15
SF3B3-202ENST00000562722 TAOK2Q9UL54 1235 aa16■□□□□ 0.15
SF3B3-202ENST00000562722 GABRQQ9UN88 632 aa16■□□□□ 0.15
SF3B3-202ENST00000562722 SLC45A1Q9Y2W3 748 aa16■□□□□ 0.15
SF3B3-202ENST00000562722 ADCY3O60266 1144 aa15.99■□□□□ 0.15
SF3B3-202ENST00000562722 GJB1P08034 283 aa15.99■□□□□ 0.15
SF3B3-202ENST00000562722 MAP3K10Q02779 954 aa15.99■□□□□ 0.15
SF3B3-202ENST00000562722 ATF7IPQ6VMQ6 1270 aa15.99■□□□□ 0.15
SF3B3-202ENST00000562722 TEX11Q8IYF3 940 aa15.99■□□□□ 0.15
SF3B3-202ENST00000562722 NSUN4Q96CB9 384 aaKnown RBP15.99■□□□□ 0.15
SF3B3-202ENST00000562722 PNMA3Q9UL41 463 aa15.99■□□□□ 0.15
SF3B3-202ENST00000562722 AGTPBP1Q9UPW5 1226 aa15.99■□□□□ 0.15
SF3B3-202ENST00000562722 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.99■□□□□ 0.15
SF3B3-202ENST00000562722 PNMA6EA0A0J9YXQ4 647 aa15.98■□□□□ 0.15
SF3B3-202ENST00000562722 TBC1D12O60347 775 aa15.98■□□□□ 0.15
SF3B3-202ENST00000562722 UQCRFS1P1P0C7P4 283 aa15.98■□□□□ 0.15
SF3B3-202ENST00000562722 GJA8P48165 433 aa15.98■□□□□ 0.15
SF3B3-202ENST00000562722 FLT3LGP49771 235 aa15.98■□□□□ 0.15
SF3B3-202ENST00000562722 OS9Q13438 667 aaPredicted RBP15.98■□□□□ 0.15
SF3B3-202ENST00000562722 DOCK1Q14185 1865 aa15.98■□□□□ 0.15
SF3B3-202ENST00000562722 ANKRD13CQ8N6S4 541 aa15.98■□□□□ 0.15
SF3B3-202ENST00000562722 ZNF384Q8TF68 577 aa15.98■□□□□ 0.15
SF3B3-202ENST00000562722 TNNQ9UQP3 1299 aa15.98■□□□□ 0.15
SF3B3-202ENST00000562722 NPM3O75607 178 aaKnown RBP15.97■□□□□ 0.15
SF3B3-202ENST00000562722 BCAR3O75815 825 aa15.97■□□□□ 0.15
SF3B3-202ENST00000562722 MAP4K4O95819 1239 aaPredicted RBP15.97■□□□□ 0.15
SF3B3-202ENST00000562722 ELNP15502 786 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 156.3 ms