RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 INHBEP58166 350 aa8.51□□□□□ -1.05
SPG11-224ENST00000561268 VGLL4Q14135 290 aa8.51□□□□□ -1.05
SPG11-224ENST00000561268 TTLL12Q14166 644 aaPredicted RBP8.51□□□□□ -1.05
SPG11-224ENST00000561268 MVPQ14764 893 aaKnown RBP8.51□□□□□ -1.05
SPG11-224ENST00000561268 ZGPATQ8N5A5 531 aaKnown RBP8.51□□□□□ -1.05
SPG11-224ENST00000561268 MS4A4AQ96JQ5 239 aa8.51□□□□□ -1.05
SPG11-224ENST00000561268 AKAP2Q9Y2D5 859 aa8.51□□□□□ -1.05
SPG11-224ENST00000561268 NOP58Q9Y2X3 529 aaKnown RBP8.51□□□□□ -1.05
SPG11-224ENST00000561268 SNCAIPQ9Y6H5 919 aa8.51□□□□□ -1.05
SPG11-224ENST00000561268 RLFQ13129 1914 aa8.5□□□□□ -1.05
SPG11-224ENST00000561268 TCP10L2B9ZVM9 353 aa8.5□□□□□ -1.05
SPG11-224ENST00000561268 IGSF3O75054 1194 aa8.5□□□□□ -1.05
SPG11-224ENST00000561268 ALDH1A1P00352 501 aa8.5□□□□□ -1.05
SPG11-224ENST00000561268 MAP3K10Q02779 954 aa8.5□□□□□ -1.05
SPG11-224ENST00000561268 TFCP2Q12800 502 aa8.5□□□□□ -1.05
SPG11-224ENST00000561268 DIXDC1Q155Q3 683 aa8.5□□□□□ -1.05
SPG11-224ENST00000561268 NOL9Q5SY16 702 aaKnown RBP8.5□□□□□ -1.05
SPG11-224ENST00000561268 CTU1Q7Z7A3 348 aaKnown RBP8.5□□□□□ -1.05
SPG11-224ENST00000561268 IFNL1Q8IU54 200 aa8.5□□□□□ -1.05
SPG11-224ENST00000561268 ZNF296Q8WUU4 475 aaPredicted RBP8.5□□□□□ -1.05
SPG11-224ENST00000561268 FAM151AQ8WW52 585 aa8.5□□□□□ -1.05
SPG11-224ENST00000561268 CLUAP1Q96AJ1 413 aa8.5□□□□□ -1.05
SPG11-224ENST00000561268 XAGE2Q96GT9 111 aa8.5□□□□□ -1.05
SPG11-224ENST00000561268 IDI2Q9BXS1 227 aa8.5□□□□□ -1.05
SPG11-224ENST00000561268 ZCCHC17Q9NP64 241 aaKnown RBP8.5□□□□□ -1.05
SPG11-224ENST00000561268 GNL3LQ9NVN8 582 aaKnown RBP8.5□□□□□ -1.05
SPG11-224ENST00000561268 FAM198AQ9UFP1 575 aa8.5□□□□□ -1.05
SPG11-224ENST00000561268 ZNF112Q9UJU3 913 aa8.5□□□□□ -1.05
SPG11-224ENST00000561268 MROH7-TTC4A0A0A0MT08 1334 aa8.5□□□□□ -1.05
SPG11-224ENST00000561268 TNRC18O15417 2968 aaPredicted RBP8.49□□□□□ -1.05
SPG11-224ENST00000561268 BRCA2P51587 3418 aa8.49□□□□□ -1.05
SPG11-224ENST00000561268 GPR25O00155 361 aa8.49□□□□□ -1.05
SPG11-224ENST00000561268 ZBTB7BO15156 539 aaPredicted RBP8.49□□□□□ -1.05
SPG11-224ENST00000561268 FRAT2O75474 233 aaPredicted RBP8.49□□□□□ -1.05
SPG11-224ENST00000561268 LDHBP07195 334 aaKnown RBP8.49□□□□□ -1.05
SPG11-224ENST00000561268 MS4A1P11836 297 aa8.49□□□□□ -1.05
SPG11-224ENST00000561268 MCAMP43121 646 aa8.49□□□□□ -1.05
SPG11-224ENST00000561268 CACNB3P54284 484 aa8.49□□□□□ -1.05
SPG11-224ENST00000561268 NFIAQ12857 509 aa8.49□□□□□ -1.05
SPG11-224ENST00000561268 DGKZQ13574 1117 aa8.49□□□□□ -1.05
SPG11-224ENST00000561268 PRKG1Q13976 671 aa8.49□□□□□ -1.05
SPG11-224ENST00000561268 CDC42EP5Q6NZY7 148 aa8.49□□□□□ -1.05
SPG11-224ENST00000561268 FRAT1Q92837 279 aaPredicted RBP8.49□□□□□ -1.05
SPG11-224ENST00000561268 OPTNQ96CV9 577 aa8.49□□□□□ -1.05
SPG11-224ENST00000561268 HOOK2Q96ED9 719 aa8.49□□□□□ -1.05
SPG11-224ENST00000561268 ZNF512BQ96KM6 892 aaPredicted RBP8.49□□□□□ -1.05
SPG11-224ENST00000561268 R3HDMLQ9H3Y0 253 aa8.49□□□□□ -1.05
SPG11-224ENST00000561268 TMOD2Q9NZR1 351 aa8.49□□□□□ -1.05
SPG11-224ENST00000561268 CENPFP49454 3210 aa8.49□□□□□ -1.05
SPG11-224ENST00000561268 ADGRA2Q96PE1 1338 aa8.49□□□□□ -1.05
SPG11-224ENST00000561268 ALPK3Q96L96 1907 aa8.48□□□□□ -1.05
SPG11-224ENST00000561268 ENTPD3O75355 529 aa8.48□□□□□ -1.05
SPG11-224ENST00000561268 WDHD1O75717 1129 aaPredicted RBP8.48□□□□□ -1.05
SPG11-224ENST00000561268 MAP4K4O95819 1239 aaPredicted RBP8.48□□□□□ -1.05
SPG11-224ENST00000561268 PLCG2P16885 1265 aa8.48□□□□□ -1.05
SPG11-224ENST00000561268 RHBDL3P58872 404 aa8.48□□□□□ -1.05
SPG11-224ENST00000561268 TIMM10P62072 90 aa8.48□□□□□ -1.05
SPG11-224ENST00000561268 MAP3K9P80192 1104 aa8.48□□□□□ -1.05
SPG11-224ENST00000561268 ATP8B2P98198 1209 aa8.48□□□□□ -1.05
SPG11-224ENST00000561268 PPIL2Q13356 520 aa8.48□□□□□ -1.05
SPG11-224ENST00000561268 PKN2Q16513 984 aaKnown RBP8.48□□□□□ -1.05
SPG11-224ENST00000561268 TNNI3KQ59H18 835 aa8.48□□□□□ -1.05
SPG11-224ENST00000561268 DCAF15Q66K64 600 aa8.48□□□□□ -1.05
SPG11-224ENST00000561268 CEP85Q6P2H3 762 aa8.48□□□□□ -1.05
SPG11-224ENST00000561268 ERO1BQ86YB8 467 aa8.48□□□□□ -1.05
SPG11-224ENST00000561268 BRI3BPQ8WY22 251 aa8.48□□□□□ -1.05
SPG11-224ENST00000561268 SLC10A4Q96EP9 437 aa8.48□□□□□ -1.05
SPG11-224ENST00000561268 PTPN18Q99952 460 aa8.48□□□□□ -1.05
SPG11-224ENST00000561268 HMG20BQ9P0W2 317 aa8.48□□□□□ -1.05
SPG11-224ENST00000561268 KCNH4Q9UQ05 1017 aa8.48□□□□□ -1.05
SPG11-224ENST00000561268 FPGT-TNNI3KV9GXZ4 949 aa8.48□□□□□ -1.05
SPG11-224ENST00000561268 GPR75-ASB3A0A0A6YYF3 556 aa8.47□□□□□ -1.05
SPG11-224ENST00000561268 TBC1D8O95759 1140 aa8.47□□□□□ -1.05
SPG11-224ENST00000561268 MKRN3Q13064 507 aaKnown RBP8.47□□□□□ -1.05
SPG11-224ENST00000561268 PI16Q6UXB8 463 aa8.47□□□□□ -1.05
SPG11-224ENST00000561268 FTSJ3Q8IY81 847 aaKnown RBP8.47□□□□□ -1.05
SPG11-224ENST00000561268 PLCD3Q8N3E9 789 aa8.47□□□□□ -1.05
SPG11-224ENST00000561268 NSUN4Q96CB9 384 aaKnown RBP8.47□□□□□ -1.05
SPG11-224ENST00000561268 WRNIP1Q96S55 665 aa8.47□□□□□ -1.05
SPG11-224ENST00000561268 TMEM106CQ9BVX2 250 aa8.47□□□□□ -1.05
SPG11-224ENST00000561268 ZNF236Q9UL36 1845 aa8.47□□□□□ -1.05
SPG11-224ENST00000561268 COL11A1P12107 1806 aaPredicted RBP8.46□□□□□ -1.06
SPG11-224ENST00000561268 PHF20L1A8MW92 1017 aa8.46□□□□□ -1.06
SPG11-224ENST00000561268 FKTNO75072 461 aa8.46□□□□□ -1.06
SPG11-224ENST00000561268 UQCRFS1P1P0C7P4 283 aa8.46□□□□□ -1.06
SPG11-224ENST00000561268 GTF2A2P52657 109 aa8.46□□□□□ -1.06
SPG11-224ENST00000561268 CAP1Q01518 475 aa8.46□□□□□ -1.06
SPG11-224ENST00000561268 MECOMQ03112 1051 aa8.46□□□□□ -1.06
SPG11-224ENST00000561268 CRHR2Q13324 411 aa8.46□□□□□ -1.06
SPG11-224ENST00000561268 MOGSQ13724 837 aa8.46□□□□□ -1.06
SPG11-224ENST00000561268 SPTY2D1Q68D10 685 aaPredicted RBP8.46□□□□□ -1.06
SPG11-224ENST00000561268 FBXO46Q6PJ61 603 aaPredicted RBP8.46□□□□□ -1.06
SPG11-224ENST00000561268 SH3BP5LQ7L8J4 393 aa8.46□□□□□ -1.06
SPG11-224ENST00000561268 ITPRIPQ8IWB1 547 aa8.46□□□□□ -1.06
SPG11-224ENST00000561268 SPATA5Q8NB90 893 aa8.46□□□□□ -1.06
SPG11-224ENST00000561268 ZNF341Q9BYN7 854 aa8.46□□□□□ -1.06
SPG11-224ENST00000561268 ELP3Q9H9T3 547 aa8.46□□□□□ -1.06
SPG11-224ENST00000561268 DDX4Q9NQI0 724 aaKnown RBP8.46□□□□□ -1.06
SPG11-224ENST00000561268 DBNLQ9UJU6 430 aaKnown RBP8.46□□□□□ -1.06
SPG11-224ENST00000561268 CSADQ9Y600 493 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms