RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 SPDYE5A6NIY4 337 aa15.33■□□□□ 0.04
SMAD3-208ENST00000558827 IRF6O14896 467 aa15.33■□□□□ 0.04
SMAD3-208ENST00000558827 FKTNO75072 461 aa15.33■□□□□ 0.04
SMAD3-208ENST00000558827 INHBEP58166 350 aa15.33■□□□□ 0.04
SMAD3-208ENST00000558827 GSTO1P78417 241 aa15.33■□□□□ 0.04
SMAD3-208ENST00000558827 CRHR2Q13324 411 aa15.33■□□□□ 0.04
SMAD3-208ENST00000558827 ADGRA1Q86SQ6 560 aa15.33■□□□□ 0.04
SMAD3-208ENST00000558827 TEX11Q8IYF3 940 aa15.33■□□□□ 0.04
SMAD3-208ENST00000558827 RHPN1Q8TCX5 695 aa15.33■□□□□ 0.04
SMAD3-208ENST00000558827 SH3RF3Q8TEJ3 882 aaPredicted RBP15.33■□□□□ 0.04
SMAD3-208ENST00000558827 HOOK2Q96ED9 719 aa15.33■□□□□ 0.04
SMAD3-208ENST00000558827 IDI2Q9BXS1 227 aa15.33■□□□□ 0.04
SMAD3-208ENST00000558827 ANTXR1Q9H6X2 564 aa15.33■□□□□ 0.04
SMAD3-208ENST00000558827 AATFQ9NY61 560 aaKnown RBP eCLIP15.33■□□□□ 0.04
SMAD3-208ENST00000558827 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.33■□□□□ 0.04
SMAD3-208ENST00000558827 ZBTB22O15209 634 aa15.32■□□□□ 0.04
SMAD3-208ENST00000558827 ENTPD3O75355 529 aa15.32■□□□□ 0.04
SMAD3-208ENST00000558827 ALDH1A1P00352 501 aa15.32■□□□□ 0.04
SMAD3-208ENST00000558827 GTF2A2P52657 109 aa15.32■□□□□ 0.04
SMAD3-208ENST00000558827 OTUD7BQ6GQQ9 843 aa15.32■□□□□ 0.04
SMAD3-208ENST00000558827 CCDC84Q86UT8 332 aaPredicted RBP15.32■□□□□ 0.04
SMAD3-208ENST00000558827 ERO1BQ86YB8 467 aa15.32■□□□□ 0.04
SMAD3-208ENST00000558827 FAM43AQ8N2R8 423 aa15.32■□□□□ 0.04
SMAD3-208ENST00000558827 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.32■□□□□ 0.04
SMAD3-208ENST00000558827 IDH1O75874 414 aaKnown RBP15.31■□□□□ 0.04
SMAD3-208ENST00000558827 CYP7A1P22680 504 aa15.31■□□□□ 0.04
SMAD3-208ENST00000558827 DYNLL1P63167 89 aaKnown RBP15.31■□□□□ 0.04
SMAD3-208ENST00000558827 SLC4A8Q2Y0W8 1093 aa15.31■□□□□ 0.04
SMAD3-208ENST00000558827 ERC1Q8IUD2 1116 aa15.31■□□□□ 0.04
SMAD3-208ENST00000558827 RPAP2Q8IXW5 612 aaPredicted RBP15.31■□□□□ 0.04
SMAD3-208ENST00000558827 NOL10Q9BSC4 688 aaKnown RBP15.31■□□□□ 0.04
SMAD3-208ENST00000558827 ZNF112Q9UJU3 913 aa15.31■□□□□ 0.04
SMAD3-208ENST00000558827 RPAP1Q9BWH6 1393 aaPredicted RBP15.31■□□□□ 0.04
SMAD3-208ENST00000558827 TESPA1A2RU30 521 aaPredicted RBP15.3■□□□□ 0.04
SMAD3-208ENST00000558827 BTBD19C9JJ37 291 aa15.3■□□□□ 0.04
SMAD3-208ENST00000558827 SMARCA5O60264 1052 aaPredicted RBP15.3■□□□□ 0.04
SMAD3-208ENST00000558827 HMMRO75330 724 aa15.3■□□□□ 0.04
SMAD3-208ENST00000558827 TAF1CQ15572 869 aaPredicted RBP15.3■□□□□ 0.04
SMAD3-208ENST00000558827 MAPKAPK5Q8IW41 473 aa15.3■□□□□ 0.04
SMAD3-208ENST00000558827 MIGA1Q8NAN2 632 aa15.3■□□□□ 0.04
SMAD3-208ENST00000558827 CD99L2Q8TCZ2 262 aa15.3■□□□□ 0.04
SMAD3-208ENST00000558827 TGFBRAP1Q8WUH2 860 aa15.3■□□□□ 0.04
SMAD3-208ENST00000558827 RFX7Q2KHR2 1363 aa15.29■□□□□ 0.04
SMAD3-208ENST00000558827 PHF20L1A8MW92 1017 aa15.29■□□□□ 0.04
SMAD3-208ENST00000558827 SOX10P56693 466 aa15.29■□□□□ 0.04
SMAD3-208ENST00000558827 CAP1Q01518 475 aa15.29■□□□□ 0.04
SMAD3-208ENST00000558827 PPIL2Q13356 520 aa15.29■□□□□ 0.04
SMAD3-208ENST00000558827 PDE3AQ14432 1141 aa15.29■□□□□ 0.04
SMAD3-208ENST00000558827 HSP90AB4PQ58FF6 505 aa15.29■□□□□ 0.04
SMAD3-208ENST00000558827 MAGEB6Q8N7X4 407 aa15.29■□□□□ 0.04
SMAD3-208ENST00000558827 EDC3Q96F86 508 aaKnown RBP15.29■□□□□ 0.04
SMAD3-208ENST00000558827 SAP30BPQ9UHR5 308 aaKnown RBP15.29■□□□□ 0.04
SMAD3-208ENST00000558827 ATRNL1Q5VV63 1379 aa15.28■□□□□ 0.04
SMAD3-208ENST00000558827 IFIT2P09913 472 aaKnown RBP15.28■□□□□ 0.04
SMAD3-208ENST00000558827 CETPP11597 493 aa15.28■□□□□ 0.04
SMAD3-208ENST00000558827 SNAPC2Q13487 334 aa15.28■□□□□ 0.04
SMAD3-208ENST00000558827 CLASRPQ8N2M8 674 aaKnown RBP15.28■□□□□ 0.04
SMAD3-208ENST00000558827 KIF1BPQ96EK5 621 aa15.28■□□□□ 0.04
SMAD3-208ENST00000558827 ZNF512BQ96KM6 892 aaPredicted RBP15.28■□□□□ 0.04
SMAD3-208ENST00000558827 DNAJC2Q99543 621 aaKnown RBP15.28■□□□□ 0.04
SMAD3-208ENST00000558827 OSBPL5Q9H0X9 879 aaPredicted RBP15.28■□□□□ 0.04
SMAD3-208ENST00000558827 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.28■□□□□ 0.04
SMAD3-208ENST00000558827 HPS5Q9UPZ3 1129 aa15.28■□□□□ 0.04
SMAD3-208ENST00000558827 TRIM17Q9Y577 477 aa15.28■□□□□ 0.04
SMAD3-208ENST00000558827 ZHX2Q9Y6X8 837 aa15.28■□□□□ 0.04
SMAD3-208ENST00000558827 DOCK2Q92608 1830 aa15.28■□□□□ 0.04
SMAD3-208ENST00000558827 BAG3O95817 575 aa15.27■□□□□ 0.04
SMAD3-208ENST00000558827 PPATQ06203 517 aa15.27■□□□□ 0.04
SMAD3-208ENST00000558827 RRP1BQ14684 758 aaKnown RBP15.27■□□□□ 0.04
SMAD3-208ENST00000558827 CFHR5Q9BXR6 569 aa15.27■□□□□ 0.04
SMAD3-208ENST00000558827 ZFYVE28Q9HCC9 887 aa15.27■□□□□ 0.04
SMAD3-208ENST00000558827 PICK1Q9NRD5 415 aa15.27■□□□□ 0.04
SMAD3-208ENST00000558827 SP3Q02447 781 aa15.26■□□□□ 0.03
SMAD3-208ENST00000558827 SLFNL1Q499Z3 407 aa15.26■□□□□ 0.03
SMAD3-208ENST00000558827 NOL9Q5SY16 702 aaKnown RBP15.26■□□□□ 0.03
SMAD3-208ENST00000558827 SCYL3Q8IZE3 742 aa15.26■□□□□ 0.03
SMAD3-208ENST00000558827 BOLA2Q9H3K6 86 aa15.26■□□□□ 0.03
SMAD3-208ENST00000558827 CHMP4BQ9H444 224 aaKnown RBP15.26■□□□□ 0.03
SMAD3-208ENST00000558827 PALD1Q9ULE6 856 aa15.26■□□□□ 0.03
SMAD3-208ENST00000558827 GOLIM4O00461 696 aa15.25■□□□□ 0.03
SMAD3-208ENST00000558827 RAB11FIP3O75154 756 aa15.25■□□□□ 0.03
SMAD3-208ENST00000558827 PTPRAP18433 802 aa15.25■□□□□ 0.03
SMAD3-208ENST00000558827 GADL1Q6ZQY3 521 aa15.25■□□□□ 0.03
SMAD3-208ENST00000558827 OTOP1Q7RTM1 612 aa15.25■□□□□ 0.03
SMAD3-208ENST00000558827 CPA4Q9UI42 421 aa15.25■□□□□ 0.03
SMAD3-208ENST00000558827 TRIM75PA6NK02 468 aa15.24■□□□□ 0.03
SMAD3-208ENST00000558827 PDHXO00330 501 aa15.24■□□□□ 0.03
SMAD3-208ENST00000558827 PPP4CP60510 307 aa15.24■□□□□ 0.03
SMAD3-208ENST00000558827 MAP3K12Q12852 859 aa15.24■□□□□ 0.03
SMAD3-208ENST00000558827 MOGSQ13724 837 aa15.24■□□□□ 0.03
SMAD3-208ENST00000558827 SHROOM1Q2M3G4 852 aaPredicted RBP15.24■□□□□ 0.03
SMAD3-208ENST00000558827 NOM1Q5C9Z4 860 aaKnown RBP15.24■□□□□ 0.03
SMAD3-208ENST00000558827 ERO1AQ96HE7 468 aa15.24■□□□□ 0.03
SMAD3-208ENST00000558827 ARHGAP39Q9C0H5 1083 aa15.24■□□□□ 0.03
SMAD3-208ENST00000558827 KCNH4Q9UQ05 1017 aa15.24■□□□□ 0.03
SMAD3-208ENST00000558827 FLT1P17948 1338 aa15.23■□□□□ 0.03
SMAD3-208ENST00000558827 CTNND1O60716 968 aaKnown RBP15.23■□□□□ 0.03
SMAD3-208ENST00000558827 CHGBP05060 677 aa15.23■□□□□ 0.03
SMAD3-208ENST00000558827 PLCG2P16885 1265 aa15.23■□□□□ 0.03
SMAD3-208ENST00000558827 USP5P45974 858 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms