RNA–Protein interactions for RNA: ENST00000558207.5

ACAN-203, Transcript of aggrecan, humanhuman

TSL 1 (best) BASIC

Gene ACAN, Length 4,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAN-203ENST00000558207 C2CD5Q86YS7 1000 aa13.06□□□□□ -0.32
ACAN-203ENST00000558207 CDHR2Q9BYE9 1310 aa13.06□□□□□ -0.32
ACAN-203ENST00000558207 KRT18P05783 430 aaKnown RBP13.06□□□□□ -0.32
ACAN-203ENST00000558207 CSF1RP07333 972 aa13.06□□□□□ -0.32
ACAN-203ENST00000558207 PDIA4P13667 645 aaKnown RBP13.06□□□□□ -0.32
ACAN-203ENST00000558207 MCM7P33993 719 aa13.06□□□□□ -0.32
ACAN-203ENST00000558207 CASP7P55210 303 aa13.06□□□□□ -0.32
ACAN-203ENST00000558207 MECOMQ03112 1051 aa13.06□□□□□ -0.32
ACAN-203ENST00000558207 CCDC47Q96A33 483 aaKnown RBP13.06□□□□□ -0.32
ACAN-203ENST00000558207 PFKFB2O60825 505 aa13.05□□□□□ -0.32
ACAN-203ENST00000558207 NTSR2O95665 410 aa13.05□□□□□ -0.32
ACAN-203ENST00000558207 TTC14Q96N46 770 aa13.05□□□□□ -0.32
ACAN-203ENST00000558207 BSDC1Q9NW68 430 aaPredicted RBP13.05□□□□□ -0.32
ACAN-203ENST00000558207 TYRO3Q06418 890 aa13.05□□□□□ -0.32
ACAN-203ENST00000558207 COL9A3Q14050 684 aaPredicted RBP13.05□□□□□ -0.32
ACAN-203ENST00000558207 NSUN7Q8NE18 718 aaKnown RBP13.05□□□□□ -0.32
ACAN-203ENST00000558207 FEZ1Q99689 392 aa13.05□□□□□ -0.32
ACAN-203ENST00000558207 XRN1Q8IZH2 1706 aaKnown RBP13.05□□□□□ -0.32
ACAN-203ENST00000558207 PXDNLA1KZ92 1463 aa13.05□□□□□ -0.32
ACAN-203ENST00000558207 BTDP43251 543 aa13.05□□□□□ -0.32
ACAN-203ENST00000558207 CACNB3P54284 484 aa13.05□□□□□ -0.32
ACAN-203ENST00000558207 NAPAP54920 295 aa13.05□□□□□ -0.32
ACAN-203ENST00000558207 OGFOD1Q8N543 542 aa13.05□□□□□ -0.32
ACAN-203ENST00000558207 STAMQ92783 540 aa13.05□□□□□ -0.32
ACAN-203ENST00000558207 DHX58Q96C10 678 aa13.05□□□□□ -0.32
ACAN-203ENST00000558207 TTC12Q9H892 705 aaPredicted RBP13.05□□□□□ -0.32
ACAN-203ENST00000558207 BTBD18B2RXH4 712 aa13.04□□□□□ -0.32
ACAN-203ENST00000558207 TPM3P06753 285 aa13.04□□□□□ -0.32
ACAN-203ENST00000558207 ZNF76P36508 570 aa13.04□□□□□ -0.32
ACAN-203ENST00000558207 APOA5Q6Q788 366 aa13.04□□□□□ -0.32
ACAN-203ENST00000558207 CCDC43Q96MW1 224 aaKnown RBP13.04□□□□□ -0.32
ACAN-203ENST00000558207 ANO10Q9NW15 660 aa13.04□□□□□ -0.32
ACAN-203ENST00000558207 CYB5R4Q7L1T6 521 aa13.03□□□□□ -0.32
ACAN-203ENST00000558207 FAM84BQ96KN1 310 aaPredicted RBP13.03□□□□□ -0.32
ACAN-203ENST00000558207 CEP131Q9UPN4 1083 aa13.03□□□□□ -0.32
ACAN-203ENST00000558207 LTN1O94822 1766 aa13.03□□□□□ -0.32
ACAN-203ENST00000558207 EPB41L2O43491 1005 aaKnown RBP13.03□□□□□ -0.32
ACAN-203ENST00000558207 NR1I2O75469 434 aa13.03□□□□□ -0.32
ACAN-203ENST00000558207 LARGE2Q8N3Y3 721 aa13.03□□□□□ -0.32
ACAN-203ENST00000558207 SLC44A5Q8NCS7 719 aa13.03□□□□□ -0.32
ACAN-203ENST00000558207 ANKRD20A12PQ8NF67 263 aa13.03□□□□□ -0.32
ACAN-203ENST00000558207 NMT2O60551 498 aa13.03□□□□□ -0.32
ACAN-203ENST00000558207 EN1Q05925 392 aaPredicted RBP13.03□□□□□ -0.32
ACAN-203ENST00000558207 PIK3AP1Q6ZUJ8 805 aa13.03□□□□□ -0.32
ACAN-203ENST00000558207 NLGN1Q8N2Q7 840 aa13.03□□□□□ -0.32
ACAN-203ENST00000558207 AOPEPQ8N6M6 819 aa13.03□□□□□ -0.32
ACAN-203ENST00000558207 KCNG4Q8TDN1 519 aa13.03□□□□□ -0.32
ACAN-203ENST00000558207 USP40Q9NVE5 1235 aa13.03□□□□□ -0.32
ACAN-203ENST00000558207 GJA3Q9Y6H8 435 aa13.03□□□□□ -0.32
ACAN-203ENST00000558207 NEDD4P46934 1319 aa13.03□□□□□ -0.32
ACAN-203ENST00000558207 XDHP47989 1333 aa13.03□□□□□ -0.32
ACAN-203ENST00000558207 PPIP5K2O43314 1243 aa13.02□□□□□ -0.32
ACAN-203ENST00000558207 ECM2O94769 699 aaPredicted RBP13.02□□□□□ -0.32
ACAN-203ENST00000558207 LMOD1P29536 600 aaPredicted RBP13.02□□□□□ -0.32
ACAN-203ENST00000558207 BARGINQ6ZT62 677 aa13.02□□□□□ -0.32
ACAN-203ENST00000558207 CPLX3Q8WVH0 158 aa13.02□□□□□ -0.32
ACAN-203ENST00000558207 VWA3AA6NCI4 1184 aa13.02□□□□□ -0.32
ACAN-203ENST00000558207 PPEF1O14829 653 aaPredicted RBP13.02□□□□□ -0.32
ACAN-203ENST00000558207 ZNF274Q96GC6 653 aaPredicted RBP13.02□□□□□ -0.32
ACAN-203ENST00000558207 ATF5Q9Y2D1 282 aaPredicted RBP13.02□□□□□ -0.32
ACAN-203ENST00000558207 TRIM75PA6NK02 468 aa13.02□□□□□ -0.33
ACAN-203ENST00000558207 TPM1P09493 284 aa13.02□□□□□ -0.33
ACAN-203ENST00000558207 GRAPQ13588 217 aa13.02□□□□□ -0.33
ACAN-203ENST00000558207 GRAPLQ8TC17 118 aaPredicted RBP13.02□□□□□ -0.33
ACAN-203ENST00000558207 GPKOWQ92917 476 aaPredicted RBP eCLIP13.02□□□□□ -0.33
ACAN-203ENST00000558207 EYA3Q99504 573 aa13.02□□□□□ -0.33
ACAN-203ENST00000558207 LLPHQ9BRT6 129 aaKnown RBP13.02□□□□□ -0.33
ACAN-203ENST00000558207 CPVLQ9H3G5 476 aa13.02□□□□□ -0.33
ACAN-203ENST00000558207 BCL9O00512 1426 aa13.02□□□□□ -0.33
ACAN-203ENST00000558207 IDEP14735 1019 aa13.02□□□□□ -0.33
ACAN-203ENST00000558207 TNNI2P48788 182 aa13.02□□□□□ -0.33
ACAN-203ENST00000558207 TSR1Q2NL82 804 aaKnown RBP13.02□□□□□ -0.33
ACAN-203ENST00000558207 ANO1Q5XXA6 986 aa13.02□□□□□ -0.33
ACAN-203ENST00000558207 ZSCAN30Q86W11 494 aa13.02□□□□□ -0.33
ACAN-203ENST00000558207 LRRC47Q8N1G4 583 aaKnown RBP13.02□□□□□ -0.33
ACAN-203ENST00000558207 FANCBQ8NB91 859 aa13.02□□□□□ -0.33
ACAN-203ENST00000558207 CHD2O14647 1828 aaKnown RBP13.01□□□□□ -0.33
ACAN-203ENST00000558207 MED1Q15648 1581 aaPredicted RBP13.01□□□□□ -0.33
ACAN-203ENST00000558207 SETD1AO15047 1707 aaKnown RBP13.01□□□□□ -0.33
ACAN-203ENST00000558207 STX17P56962 302 aa13.01□□□□□ -0.33
ACAN-203ENST00000558207 CLIC6Q96NY7 704 aa13.01□□□□□ -0.33
ACAN-203ENST00000558207 CLIP2Q9UDT6 1046 aa13.01□□□□□ -0.33
ACAN-203ENST00000558207 CLIC4Q9Y696 253 aa13.01□□□□□ -0.33
ACAN-203ENST00000558207 USP42Q9H9J4 1324 aaKnown RBP13.01□□□□□ -0.33
ACAN-203ENST00000558207 UBA7P41226 1012 aa13.01□□□□□ -0.33
ACAN-203ENST00000558207 TRMT1Q9NXH9 659 aaKnown RBP13.01□□□□□ -0.33
ACAN-203ENST00000558207 ZSCAN10Q96SZ4 725 aaPredicted RBP13.01□□□□□ -0.33
ACAN-203ENST00000558207 UBA5Q9GZZ9 404 aa13.01□□□□□ -0.33
ACAN-203ENST00000558207 SENP2Q9HC62 589 aa13.01□□□□□ -0.33
ACAN-203ENST00000558207 RTL9Q8NET4 1388 aa13□□□□□ -0.33
ACAN-203ENST00000558207 FRMPD2Q68DX3 1309 aaPredicted RBP13□□□□□ -0.33
ACAN-203ENST00000558207 FAM196BA6NMK8 535 aa13□□□□□ -0.33
ACAN-203ENST00000558207 MYSM1Q5VVJ2 828 aa13□□□□□ -0.33
ACAN-203ENST00000558207 TXNRD3Q86VQ6 643 aa13□□□□□ -0.33
ACAN-203ENST00000558207 PRKG1Q13976 671 aa13□□□□□ -0.33
ACAN-203ENST00000558207 STX1AQ16623 288 aa13□□□□□ -0.33
ACAN-203ENST00000558207 PRR5LQ6MZQ0 368 aa13□□□□□ -0.33
ACAN-203ENST00000558207 USP17L3A6NCW0 530 aa13□□□□□ -0.33
ACAN-203ENST00000558207 USP17L4A6NCW7 530 aa13□□□□□ -0.33
ACAN-203ENST00000558207 PLCG2P16885 1265 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms