RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 MYBBP1AQ9BQG0 1328 aaKnown RBP13.17□□□□□ -0.3
TRAV33-201ENST00000557514 SLC4A2P04920 1241 aa13.17□□□□□ -0.3
TRAV33-201ENST00000557514 PTPRAP18433 802 aa13.17□□□□□ -0.3
TRAV33-201ENST00000557514 NFIAQ12857 509 aa13.17□□□□□ -0.3
TRAV33-201ENST00000557514 FKBP5Q13451 457 aaPredicted RBP13.17□□□□□ -0.3
TRAV33-201ENST00000557514 ANKRD13CQ8N6S4 541 aa13.17□□□□□ -0.3
TRAV33-201ENST00000557514 CDX2Q99626 313 aaPredicted RBP13.17□□□□□ -0.3
TRAV33-201ENST00000557514 AFG3L2Q9Y4W6 797 aa13.17□□□□□ -0.3
TRAV33-201ENST00000557514 PHF20L1A8MW92 1017 aa13.16□□□□□ -0.3
TRAV33-201ENST00000557514 TCP10Q12799 353 aa13.16□□□□□ -0.3
TRAV33-201ENST00000557514 LRRC26Q2I0M4 334 aa13.16□□□□□ -0.3
TRAV33-201ENST00000557514 GADL1Q6ZQY3 521 aa13.16□□□□□ -0.3
TRAV33-201ENST00000557514 VPS37DQ86XT2 251 aa13.16□□□□□ -0.3
TRAV33-201ENST00000557514 SYMPKQ92797 1274 aaKnown RBP13.16□□□□□ -0.3
TRAV33-201ENST00000557514 FAM198AQ9UFP1 575 aa13.16□□□□□ -0.3
TRAV33-201ENST00000557514 GJD2Q9UKL4 321 aa13.16□□□□□ -0.3
TRAV33-201ENST00000557514 AGTPBP1Q9UPW5 1226 aa13.16□□□□□ -0.3
TRAV33-201ENST00000557514 DDX60LQ5H9U9 1706 aaKnown RBP13.16□□□□□ -0.3
TRAV33-201ENST00000557514 APAF1O14727 1248 aa13.15□□□□□ -0.3
TRAV33-201ENST00000557514 CDC42EP5Q6NZY7 148 aa13.15□□□□□ -0.3
TRAV33-201ENST00000557514 TRIB2Q92519 343 aa13.15□□□□□ -0.3
TRAV33-201ENST00000557514 TSR2Q969E8 191 aaKnown RBP13.15□□□□□ -0.3
TRAV33-201ENST00000557514 PUS3Q9BZE2 481 aaKnown RBP13.15□□□□□ -0.3
TRAV33-201ENST00000557514 PICK1Q9NRD5 415 aa13.15□□□□□ -0.3
TRAV33-201ENST00000557514 DAGLAQ9Y4D2 1042 aa13.15□□□□□ -0.3
TRAV33-201ENST00000557514 MROH5Q6ZUA9 1318 aa13.14□□□□□ -0.31
TRAV33-201ENST00000557514 FRAT2O75474 233 aaPredicted RBP13.14□□□□□ -0.31
TRAV33-201ENST00000557514 PRKAR2AP13861 404 aaKnown RBP13.14□□□□□ -0.31
TRAV33-201ENST00000557514 PLA2G5P39877 138 aa13.14□□□□□ -0.31
TRAV33-201ENST00000557514 TWISTNBQ3B726 338 aaPredicted RBP13.14□□□□□ -0.31
TRAV33-201ENST00000557514 CAVIN4Q5BKX8 364 aa13.14□□□□□ -0.31
TRAV33-201ENST00000557514 BEND3Q5T5X7 828 aa13.14□□□□□ -0.31
TRAV33-201ENST00000557514 PNMA3Q9UL41 463 aa13.14□□□□□ -0.31
TRAV33-201ENST00000557514 RFX7Q2KHR2 1363 aa13.14□□□□□ -0.31
TRAV33-201ENST00000557514 MGAMO43451 1857 aa13.14□□□□□ -0.31
TRAV33-201ENST00000557514 TRIM75PA6NK02 468 aa13.13□□□□□ -0.31
TRAV33-201ENST00000557514 GRM8O00222 908 aa13.13□□□□□ -0.31
TRAV33-201ENST00000557514 TREML2Q5T2D2 321 aa13.13□□□□□ -0.31
TRAV33-201ENST00000557514 VGLL2Q8N8G2 317 aa13.13□□□□□ -0.31
TRAV33-201ENST00000557514 KIF16BQ96L93 1317 aa13.13□□□□□ -0.31
TRAV33-201ENST00000557514 GCLCP48506 637 aaPredicted RBP13.12□□□□□ -0.31
TRAV33-201ENST00000557514 MAP3K10Q02779 954 aa13.12□□□□□ -0.31
TRAV33-201ENST00000557514 DIXDC1Q155Q3 683 aa13.12□□□□□ -0.31
TRAV33-201ENST00000557514 ZFPM1Q8IX07 1006 aa13.12□□□□□ -0.31
TRAV33-201ENST00000557514 MYLIPQ8WY64 445 aa13.12□□□□□ -0.31
TRAV33-201ENST00000557514 SEMA6BQ9H3T3 888 aa13.12□□□□□ -0.31
TRAV33-201ENST00000557514 SPINK5Q9NQ38 1064 aaPredicted RBP13.12□□□□□ -0.31
TRAV33-201ENST00000557514 RAPGEFL1Q9UHV5 662 aa13.12□□□□□ -0.31
TRAV33-201ENST00000557514 TNFRSF10AO00220 468 aa13.11□□□□□ -0.31
TRAV33-201ENST00000557514 TJAP1Q5JTD0 557 aa13.11□□□□□ -0.31
TRAV33-201ENST00000557514 LBHD1Q9BQE6 289 aaPredicted RBP13.11□□□□□ -0.31
TRAV33-201ENST00000557514 TTYH1Q9H313 450 aaPredicted RBP13.11□□□□□ -0.31
TRAV33-201ENST00000557514 F6X3S4 739 aa13.1□□□□□ -0.31
TRAV33-201ENST00000557514 XRCC5P13010 732 aaKnown RBP13.1□□□□□ -0.31
TRAV33-201ENST00000557514 FOSL2P15408 326 aa13.1□□□□□ -0.31
TRAV33-201ENST00000557514 LHX8Q68G74 356 aa13.1□□□□□ -0.31
TRAV33-201ENST00000557514 CCDC84Q86UT8 332 aaPredicted RBP13.1□□□□□ -0.31
TRAV33-201ENST00000557514 PROCA1Q8NCQ7 364 aaPredicted RBP13.1□□□□□ -0.31
TRAV33-201ENST00000557514 SOCS4Q8WXH5 440 aa13.1□□□□□ -0.31
TRAV33-201ENST00000557514 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.1□□□□□ -0.31
TRAV33-201ENST00000557514 MORF4L1Q9UBU8 362 aa13.1□□□□□ -0.31
TRAV33-201ENST00000557514 CTNND1O60716 968 aaKnown RBP13.09□□□□□ -0.31
TRAV33-201ENST00000557514 ENTPD3O75355 529 aa13.09□□□□□ -0.31
TRAV33-201ENST00000557514 PDE8BO95263 885 aa13.09□□□□□ -0.31
TRAV33-201ENST00000557514 PRDX5P30044 214 aa13.09□□□□□ -0.31
TRAV33-201ENST00000557514 SMAD3P84022 425 aaKnown RBP13.09□□□□□ -0.31
TRAV33-201ENST00000557514 METTL24Q5JXM2 366 aa13.09□□□□□ -0.31
TRAV33-201ENST00000557514 SH3BP5LQ7L8J4 393 aa13.09□□□□□ -0.31
TRAV33-201ENST00000557514 WDR66Q8TBY9 1149 aa13.09□□□□□ -0.31
TRAV33-201ENST00000557514 KAZALD1Q96I82 304 aa13.09□□□□□ -0.31
TRAV33-201ENST00000557514 IDI2Q9BXS1 227 aa13.09□□□□□ -0.31
TRAV33-201ENST00000557514 LRRFIP2Q9Y608 721 aaKnown RBP13.09□□□□□ -0.31
TRAV33-201ENST00000557514 PIEZO1Q92508 2521 aa13.08□□□□□ -0.32
TRAV33-201ENST00000557514 BDP1A6H8Y1 2624 aa13.08□□□□□ -0.32
TRAV33-201ENST00000557514 CYP2B6P20813 491 aa13.08□□□□□ -0.32
TRAV33-201ENST00000557514 RGS3P49796 1198 aa13.08□□□□□ -0.32
TRAV33-201ENST00000557514 LRRC24Q50LG9 513 aa13.08□□□□□ -0.32
TRAV33-201ENST00000557514 SUCLG2Q96I99 432 aa13.08□□□□□ -0.32
TRAV33-201ENST00000557514 USP40Q9NVE5 1235 aa13.08□□□□□ -0.32
TRAV33-201ENST00000557514 TMEM265A0A087WTH1 108 aa13.07□□□□□ -0.32
TRAV33-201ENST00000557514 SLURP2P0DP57 97 aa13.07□□□□□ -0.32
TRAV33-201ENST00000557514 ZKSCAN1P17029 563 aaPredicted RBP13.07□□□□□ -0.32
TRAV33-201ENST00000557514 FGFR2P21802 821 aa13.07□□□□□ -0.32
TRAV33-201ENST00000557514 CCND3P30281 292 aaPredicted RBP13.07□□□□□ -0.32
TRAV33-201ENST00000557514 HOXD11P31277 338 aaPredicted RBP13.07□□□□□ -0.32
TRAV33-201ENST00000557514 CACNB2Q08289 660 aaPredicted RBP13.07□□□□□ -0.32
TRAV33-201ENST00000557514 PUM3Q15397 648 aaKnown RBP13.07□□□□□ -0.32
TRAV33-201ENST00000557514 SHHQ15465 462 aa13.07□□□□□ -0.32
TRAV33-201ENST00000557514 RABL6Q3YEC7 729 aaPredicted RBP13.07□□□□□ -0.32
TRAV33-201ENST00000557514 C9orf50Q5SZB4 431 aa13.07□□□□□ -0.32
TRAV33-201ENST00000557514 TRMT44Q8IYL2 757 aaKnown RBP13.07□□□□□ -0.32
TRAV33-201ENST00000557514 USP38Q8NB14 1042 aa13.07□□□□□ -0.32
TRAV33-201ENST00000557514 ASCC2Q9H1I8 757 aaPredicted RBP13.07□□□□□ -0.32
TRAV33-201ENST00000557514 PABPC4Q13310 644 aaKnown RBP eCLIP13.06□□□□□ -0.32
TRAV33-201ENST00000557514 USP6NLQ92738 828 aa13.06□□□□□ -0.32
TRAV33-201ENST00000557514 FAM122AQ96E09 287 aa13.06□□□□□ -0.32
TRAV33-201ENST00000557514 NUDT12Q9BQG2 462 aa13.06□□□□□ -0.32
TRAV33-201ENST00000557514 C9orf78Q9NZ63 289 aaPredicted RBP13.06□□□□□ -0.32
TRAV33-201ENST00000557514 GAKO14976 1311 aa13.06□□□□□ -0.32
TRAV33-201ENST00000557514 NCOR1O75376 2440 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms